Gene

KWMTBOMO13349

Annotation

reverse_transcriptase_[Danaus_plexippus]

Location

Bomo_Chr22(-):14631096-14633624      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.508

CDS

ATGGCGGCGTGGGCGCCCAAGCGCCCACAACCTGTCGATGTGGAAACCGAGGCCGAATGGTTCCGGGGCGCGATGCACCGCATATGTGATGCCTCGATGCCCCGGGTCGGCTCTCGGCACTCTGGACGGCGACAGTCGCCCTGGTGGTCGCCCGAAATTGCAAGACTGCGTGCGGTCTCCATTCGGGCGAGCCGCCGGTGCACTAGACACCGCCGTCGCCGCCGCCTGCGGCGCGACGAGCCCGTCGCGTTCGCGGAGGAGGAAGCTCGGCTGCACCGCGAATATCGCGCTGCGAAGGACGCCCTGCGGCTGGCCATCAGGCGGGCCAAGGAGCAGAACATGGAGAGACTCTTGGAGGCGCTCGAAGCGGATCCGTGGGGGAGCCCATATAAATTGGTACGCGGCAAGTTGCGCCCGTGGGCCCCCTCTATGACTGAGCGTCTCCAGCCCCAGCAGCTGCGGGACATCGTTTCGGCGTTGTTCCCGCAGGAGCGGGAGGGTATTGTCCCTCCCGCTATGGGCGGGCCGTCTGACACCGTCGACGGCCAAGCTCCTGCTGAGGTGCCCCGTATTACCGAGGCAGAGCTCCGGGTGGCCGTTGTCAAGATGACTGCGAGAGACACGGTATTGGCCTTGGCCCTCGGTGCCCTGGGGGACCGGCTCCTTGAGCTATATAATGGCTGCTTGGAGTCGGGACGGTTTCCGTCGCTCTGGCGGACGGGTAGACTTGTGTTGTTGAGGAAGGAGGGGCGCCCGGTGGATACAGCCGCCGGGTATCGTCCTATCGTGCTGCTGGACGAGGCGGGAAAATTGCTGGAACGTATTCTGGCTGCCCGCATCGTTGGGCACCTGGTCGGGGTGGGGCCTGACCTGTCGGCGGAGCAGTACGGCTTCCGAGAGGGCCGTTCGACCGTGGATGCAATTCTTCGCGTGCGGTCCCTCTCGGACGAGGCCGTTTCTCGGGGTGGGGTGGCGCTGGCGGTGTCTCTTGACATCGCCAACGCATTTAACACTCTGCCCTGGACCGTGATAGGGGGGGCACTGGAGAGGCATGGAGTGCCCCTCTACCTCCGCCGGCTGGTTGGGTCCTATTTGGGGGCCAGGTCGGTCGTATGTACCGGGTACGGTGGGACCCTTCATCGTTTTCCGGTCGTGCGTGGTGTTCCACAGGGGTCGGTTCTCGGCCCCCTCTTGTGGAATATCGGGTACGACTGGGTGCTGAGGGGCGCCCTCCTCCCGGGTCTCCGCGTTATTTGTTACGCGGACGACACGTTGGTCGTGGCCCGGGGGGATGATTTTAGGGAGTCTGCCCGTCTCGCCACAGCGGGAGTGGCCCTCGTCGTCGGAAGGATAAGGAGTCTGGGTCTCGACGTGGCGCTCAGTAAATCCGAGGCTCTGTGGTTTCACGGGCCGCGGAGGGCGCCACCAGTTGACACCCACATCGTGGTTGGAGGCGTCCGGATAGGGGTCGGGGTGCAGTTGAAGTACCTCGGCCTCGTGTTGGACAGCCGGTGGGCTTTTCGTGCTCACTTTGCGGAGCTGGTCCCCCGATTGATGGGGACGGCCGGTTCTTTGAGCCGGCTGCTCCCGAATATTGGGGGACCGGATCAGGTTGTGCGCCGCCTCTACGCGGGGGTGGTGCGATCGATGGCCCTGTACGGTGCACCTGTGTGGGCTGAGCCGCGCAACCGGGCCACTATGGCTCGGTTTCTGCGCCGGCCGCAGCGCACCGTTGCCATCAGGGTCATCCGCGGATATCGCACCGTCTCCTTCGAGGCGGCGTGTGTTTTGGCGGGGACGCCGCCATGGGAGCTGGAGGCGGAGTCGCTCGCTGTCGACTATCGGTGGCGCAGCGAGCTCCGTGCTCGGGGCGTGGCGCGTGTCCCCGAGAGTGAGCTGAGGGCGCGGAAGGCCCATTCTCGGCGGTCCGTGCTCGAGTCGTGGTCGAGGCGATTGGCCAACCCCACGTGGGGGCTACGGACCGTCGAGGCGGTTTACCCGGTCTTTGATGACTGGGTGAATCGTGGCGAAGGACGTCTCACCTTTCGTCTGGTGCAGGTGCTGACCGGGCACGGATGCTTCGGGAAGTACCTGCGCCGGATAGGGGCTGAGCCGACGACGAGGTGTCACCATTGTGGACACGACCTGGACACGGCGGAGCATACGCTCGCTGTCTGCCCCGCTTGGGAGGTGCAGCGCCGTGTCCTGGTCGCAAAGATAGGACCTGACTTGTCGCTGCCTGGCGTCGTGGCGTCGATGCTTGGCAGCGATGAGTCATGGAAGGCTATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGAGTGAGGGAAAGCTCTCCTCACTACGCAGAAACCCGCCGCCGCCGAGCAGGGGGTCGGGACCGGGGTCGTATCCGTGACCTGGCCCCCTAA

Protein

MAAWAPKRPQPVDVETEAEWFRGAMHRICDASMPRVGSRHSGRRQSPWWSPEIARLRAVSIRASRRCTRHRRRRRLRRDEPVAFAEEEARLHREYRAAKDALRLAIRRAKEQNMERLLEALEADPWGSPYKLVRGKLRPWAPSMTERLQPQQLRDIVSALFPQEREGIVPPAMGGPSDTVDGQAPAEVPRITEAELRVAVVKMTARDTVLALALGALGDRLLELYNGCLESGRFPSLWRTGRLVLLRKEGRPVDTAAGYRPIVLLDEAGKLLERILAARIVGHLVGVGPDLSAEQYGFREGRSTVDAILRVRSLSDEAVSRGGVALAVSLDIANAFNTLPWTVIGGALERHGVPLYLRRLVGSYLGARSVVCTGYGGTLHRFPVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLRVICYADDTLVVARGDDFRESARLATAGVALVVGRIRSLGLDVALSKSEALWFHGPRRAPPVDTHIVVGGVRIGVGVQLKYLGLVLDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYGAPVWAEPRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLAGTPPWELEAESLAVDYRWRSELRARGVARVPESELRARKAHSRRSVLESWSRRLANPTWGLRTVEAVYPVFDDWVNRGEGRLTFRLVQVLTGHGCFGKYLRRIGAEPTTRCHHCGHDLDTAEHTLAVCPAWEVQRRVLVAKIGPDLSLPGVVASMLGSDESWKAMLDFCECTISQKEAAGRVRESSPHYAETRRRRAGGRDRGRIRDLAP

Uniprot

Q868Q4   Q8MY31   Q8MY33   Q8MY35   Q8MY27   A0A2W1C3J5   + More
A0A0J7N1D9   O01419   Q8MY25   A0A194R5D3   A0A0J7KQK3   A0A0J7KIY5   A0A0J7KJG6   A0A0J7KYD2   A0A0J7KIM6   A0A0J7KWU5   A0A0J7KJH4   A0A0J7KF37   A0A0J7KLH8   A0A0J7N0R3   A0A0J7NAV8   A0A0J7K3F1   A0A0J7KFH2   A0A3S2LNH8   A0A0J7KRB8   A0A0J7KPZ3   A0A0J7K3R6   A0A0J7KF40   A0A0J7KPR0   A0A0J7MY17   A0A0J7KLT9   A0A0J7K366   A0A0J7NFZ0   A0A2S2N8I2   J9LJ80   A0A0J7KMG5   A0A2S2PEZ7   A0A0J7NMN5   A0A2H8TIE5   X1WJY4   A0A2S2NQQ6   A0A2S2NJ82   A0A0J7KMU1   J9KJG8   A0A0J7KQY4   A0A2S2P488   J9LVU7   A0A0J7NJI3   J9KNN8   A0A2H8TR36   A0A2S2PRL8   A0A0J7KW81   A0A0J7MWN5   J9KUM6   A0A142LX45   X1WXT5   W8ADE4   W8ANK7   A0A2S2PBP5   J9KNS1   J9KV04   A0A2S2P7D1   X1WMW4   J9JWJ3   D6WC19   A0A0J7KF91   A0A2S2PEU2   J9JY94   X1WZ64   J9LM37   A0A2M4CKQ7   X1WSG8   J9KM84   J9KT70   F7IYV7   J9L6Z9   A0A034WR48   A0A2M4BB89   A0A0J7N8R4   A0A2M4BB78   F7IYU8   F7IYV2   F7IYV5   A0A2M4BC28   A0A139W9J0   A0A2M4BDI3  

Pubmed

12644555    28756777    9092665    26354079    25527032    24495485    + More
18362917    19820115    25348373   

EMBL

AB090825    BAC57926.1    AB078931    BAC06456.1    AB078930    BAC06454.1    + More
AB078929    BAC06452.1    AB078935    BAC06462.1    KZ149896    PZC78733.1    LBMM01012027    KMQ86470.1    D85594    BAA19776.1    AB078936    BAC06464.1    KQ460685    KPJ12887.1    LBMM01004272    KMQ92618.1    LBMM01006954    KMQ90166.1    LBMM01006671    KMQ90407.1    LBMM01002052    KMQ95336.1    LBMM01007036    KMQ90099.1    LBMM01002480    KMQ94776.1    LBMM01006657    KMQ90417.1    LBMM01008448    KMQ88867.1    LBMM01005948    KMQ91066.1    LBMM01012412    KMQ86235.1    LBMM01007425    KMQ89740.1    LBMM01015025    KMQ84953.1    LBMM01008278    KMQ89009.1    RSAL01003504    RVE40273.1    LBMM01003988    KMQ92922.1    LBMM01004505    KMQ92346.1    LBMM01015018    KMQ84954.1    LBMM01008422    KMQ88894.1    LBMM01004634    KMQ92224.1    LBMM01014122    KMQ85315.1    LBMM01005733    KMQ91252.1    LBMM01015565    KMQ84759.1    LBMM01005474    KMQ91485.1    GGMR01000779    MBY13398.1    ABLF02015311    ABLF02015320    ABLF02034009    ABLF02043484    LBMM01005465    KMQ91492.1    GGMR01015159    MBY27778.1    LBMM01003245    KMQ93755.1    GFXV01002090    MBW13895.1    ABLF02011238    GGMR01006838    MBY19457.1    GGMR01004600    MBY17219.1    LBMM01005216    KMQ91703.1    ABLF02041886    LBMM01004262    KMQ92649.1    GGMR01011682    MBY24301.1    ABLF02034925    LBMM01004261    KMQ92650.1    ABLF02023257    GFXV01003903    MBW15708.1    GGMR01019493    MBY32112.1    KMQ94772.1    LBMM01015285    KMQ84870.1    ABLF02041557    KU543683    AMS38371.1    ABLF02004854    ABLF02041317    GAMC01020519    GAMC01020515    JAB86040.1    GAMC01020517    JAB86038.1    GGMR01014195    MBY26814.1    ABLF02018808    ABLF02004674    ABLF02004675    ABLF02004676    ABLF02011637    GGMR01012748    MBY25367.1    ABLF02059310    ABLF02013358    ABLF02013361    ABLF02054869    KQ971309    EEZ99146.1    LBMM01008445    KMQ88871.1    GGMR01015354    MBY27973.1    ABLF02007989    ABLF02011183    ABLF02041884    ABLF02014650    GGFL01001583    MBW65761.1    ABLF02004597    ABLF02041324    ABLF02018942    ABLF02041885    ABLF02010223    AB593327    BAK38648.1    ABLF02021100    GAKP01002292    JAC56660.1    GGFJ01001165    MBW50306.1    LBMM01008226    KMQ89040.1    GGFJ01001164    MBW50305.1    AB593321    BAK38639.1    AB593323    BAK38643.1    AB593325    BAK38646.1    GGFJ01001439    MBW50580.1    KQ972226    KYB24577.1    GGFJ01001727    MBW50868.1   

Proteomes

UP000036403    UP000053240    UP000283053    UP000007819    UP000007266   

PRIDE

Q868Q4    O01419   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF01553   Acyltransferase
PF03372   Exo_endo_phos
PF01421   Reprolysin
PF00098   zf-CCHC
PF12017   Tnp_P_element

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR002123   Plipid/glycerol_acylTrfase       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR024079   MetalloPept_cat_dom_sf       
IPR001590   Peptidase_M12B       
IPR021896   Transposase_37       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       

Gene 3D

3.60.10.10     3.40.390.10    

ProteinModelPortal

Q868Q4   Q8MY31   Q8MY33   Q8MY35   Q8MY27   A0A2W1C3J5   + More
A0A0J7N1D9   O01419   Q8MY25   A0A194R5D3   A0A0J7KQK3   A0A0J7KIY5   A0A0J7KJG6   A0A0J7KYD2   A0A0J7KIM6   A0A0J7KWU5   A0A0J7KJH4   A0A0J7KF37   A0A0J7KLH8   A0A0J7N0R3   A0A0J7NAV8   A0A0J7K3F1   A0A0J7KFH2   A0A3S2LNH8   A0A0J7KRB8   A0A0J7KPZ3   A0A0J7K3R6   A0A0J7KF40   A0A0J7KPR0   A0A0J7MY17   A0A0J7KLT9   A0A0J7K366   A0A0J7NFZ0   A0A2S2N8I2   J9LJ80   A0A0J7KMG5   A0A2S2PEZ7   A0A0J7NMN5   A0A2H8TIE5   X1WJY4   A0A2S2NQQ6   A0A2S2NJ82   A0A0J7KMU1   J9KJG8   A0A0J7KQY4   A0A2S2P488   J9LVU7   A0A0J7NJI3   J9KNN8   A0A2H8TR36   A0A2S2PRL8   A0A0J7KW81   A0A0J7MWN5   J9KUM6   A0A142LX45   X1WXT5   W8ADE4   W8ANK7   A0A2S2PBP5   J9KNS1   J9KV04   A0A2S2P7D1   X1WMW4   J9JWJ3   D6WC19   A0A0J7KF91   A0A2S2PEU2   J9JY94   X1WZ64   J9LM37   A0A2M4CKQ7   X1WSG8   J9KM84   J9KT70   F7IYV7   J9L6Z9   A0A034WR48   A0A2M4BB89   A0A0J7N8R4   A0A2M4BB78   F7IYU8   F7IYV2   F7IYV5   A0A2M4BC28   A0A139W9J0   A0A2M4BDI3  

PDB

6AR3     E-value=0.000327524,     Score=107

KEGG

101737183    no KO assigned | (RefSeq) uncharacterized LOC101737183

GO

GO:0003964   GO:0016746   GO:0016021   GO:0008270   GO:0003676   GO:0004803   GO:0006313  

Length:

808

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0327800000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00093

outside

1  -  808

 

 

Pi

118.890839

Theta

24.789619

Tajima's D

0.84154

CLR

0.369035

CSRT

0.628768561571921

Interpretation

Uncertain