SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13334  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010951
Annotation
PREDICTED:_exocyst_complex_component_4_[Bombyx_mori]
Full name
Exocyst complex component 4      
Alternative Name
Exocyst complex component Sec8
Location in the cell
Mitochondrial   Reliability : 1.872
 

Sequence

CDS
ATGTCCTCTCCTCCACCAACGAAACCACCCCGTGGGGTTAAGCAAGGAAAAGAAACGAGTGGCCTGCTAATGTCGGTGATCAGAACACTGTCAGCGAGTGAGACCAATGAACAACGTGAAAAGGAACGCGCTAAACTTGAGAAAGAGTACAAGAAGAGCGATGCAAGGCTGGATGAGCTAGTTGCTGTTCATGCACAGGAGATTACGGATGTTATGCAAAAATTCACAGCTGTGGGTACAGCCTTATCAGTATGGGGACAGCATTGTGAGGCAGCAGTGGCTCGTCTGGGCGCATGCCGAGGTTTGTTACGATTAAGACGTGATGACCTAAGAAGATTGTGGGCGGATGCAAGAACCCATCACTATGCACTACAGATGTTAACTGATATAGAACGTGTAGTAGTTTCGGAACGTGAAACTCGCGAATCGTTATCAGCTGGTCGTGTACTAGCTGCAGCTTATACATTGAAAGCTGCCCTAGATACAGCAGACACTACACTGTCCCATGTTGATGCATTAAACACCACAAGGCAGCATTTGCAGGCAAAAAAACGTGAACTGGTAGATGTCATTGTTCGTCGAGTGAATGATGCTGTCTATCGTGGCGAAACAGCACCAATGACGAGAAGACTATCTGCTAGAAGGCGTACAGCAATCCTGTTGGCCGAACTGACAAAGAATGAAGAAGTGACTGATGCTTATCTACAAGATATCACCCCTGAGTACGAAGCGTCACTTTCTGAAGATGACAAAACATTCGAGAGTACTGTTATGATATCACTAGAAGCCTTAGGAGTATTGGAACAACTGAAGGAAGCTACTGAGAAATTCAAGGTGCAAATTCAAAATGAATTATTAGAGGTCATCGATTCGGTCTCTCGCCGAATCATCGATGAAGGCGATGTAGAAATTGACCAGGAGTGTGACGAGGATGGCGAGACACAAGAAGCCGAGGGAGTGACAGAGGCCGGGAGACCACTCGCCAGACTGGTCGCTAGTCTGGGAGAAGAGCTTAGGGCGTGCGCTGCAAGAAATAAGAGGCTTTTGCAGTTATGGCGAGGTGCCTTACAGAAACATCGACTGTCTGATGCAACTCTGCACACAGAACAACACTACTGGAGTGCCGTACAACAAGTTCTTCAACTTCTGCTGACTGAATACTTGGAGATAGAGAGCGTGAACTTAGCAGCTCAGCGCTCTGGCACTACCACAGTAGAAGCGGCCGGTTCCCAACTACGTCTGACCGACTACTTCTCCAAGAAACGACCTCAGAGGCAACACACCAAACTCTTCAGATTTACAGGCCCTACCGCAGTGACGCCCAGTCTGCAGGCTCGCCGGCACGGGTACCCGCTGGTGTGCCGCGCCGACCCGGCTCATCTGCACGCGGTGTTGCCAGCTCTGCACGCCTTGTGTGCCGACATCGAACCTCTTACAGGTGGCGGCGAATGTTCGTTACGTGCGTTTATAACGGACTACGTGCGCACAGGCGAAAGCGAGAGACTGGCTAGTATCGCGCGCGCCGCTATTGACGAGGCCATGAGATCTCCGTCCGCTTGGAGAGAAAGAGTTCCACCACCCGCTACCAACGCTAAATCTGGGGAGCGTCACCGCGTCGTGTTCGCGTGCTGCGCGTACAGCTGGCAGGCGGTGCACGGCGCGATGCGGCACGCGCGTCGCTGCGGCGCGAGCGGCGGCACGGAGGCGGCGCGCGCGGTGGCGGGTACATTGACCCCGCTGGCGACACAGTGCCGCGCGTGCCCGCACGCCGCGCCGCCCGCCGCCGCGCGCGCCGCCCGCTGGCTCGCCGACGACGACATCGTGCGGTTCCTGCAGTCGCTGCACAACTGGAAGGCGATGACCGGCGACGTGCCCGAAACCAAACAGAGCGCTCAGGAACTGAAACAGGCCTACGAACGGGAAGCCGAGATCTTGGGTTCGAGTTTGGGCGACGGCGCCGTTACACGCAAAGAAATCATATCGGACATGAATACGCTCGCCGACATAGCCGTCCTGTGCGAGACAATGGATTGGCTAAGTGCAAATATAAGAAGCATTCCCTCAATGTTATCCGGTGCAATAAAGCTCTCCGAGAAATTCCTGAACGACATATCTGCTGCAGCGTCTGTATTCGATGAGATAACACATAAATGCTTGCTTTTCTTGCATTTGGAGATGCGCATAGAGTGCTTTCATTATTTGGGTCAAGAGGATCGCGAAGGTGAAAACGGCTCCGAAGCGGACAGCCAACAGTCCGGAGGAGCAGCGCAGCTGGCCCACGCGCTGCTGGCCTTCCACGAACACGCGTCGGCTGTACTGGCGCCCTCTAGGCTCGCTTATATATTCAACGGTATAGGCGAGATGATGTCGGCCGCGGTAGTGTGGAGGTGGCAGGGGGAGCGCGGGGCGGAGGGCGGGGCGGCGGCTCGACTCGCGACACTGCGCCACTGTCTCGCTGCGCTACATCTACCTCACGATGGCTTACATAGAGCGCACGCGTACTTACATCTGTTAGCGTGTACTCCGCAGGAAATAATAACGTCAGTACGCGAAAAGGGTGCTCAATTCACGGAGTTGGAGTATTTGAACGCTTTCAAGGTTATCGGCGTTCGGCGTAACGTGTCCTCGGGCGACATGAAAATACATCTAAAACAACTATCGACCGCTCTGGGTCACGTCGGTGTTACCGTGTGA
Protein
MSSPPPTKPPRGVKQGKETSGLLMSVIRTLSASETNEQREKERAKLEKEYKKSDARLDELVAVHAQEITDVMQKFTAVGTALSVWGQHCEAAVARLGACRGLLRLRRDDLRRLWADARTHHYALQMLTDIERVVVSERETRESLSAGRVLAAAYTLKAALDTADTTLSHVDALNTTRQHLQAKKRELVDVIVRRVNDAVYRGETAPMTRRLSARRRTAILLAELTKNEEVTDAYLQDITPEYEASLSEDDKTFESTVMISLEALGVLEQLKEATEKFKVQIQNELLEVIDSVSRRIIDEGDVEIDQECDEDGETQEAEGVTEAGRPLARLVASLGEELRACAARNKRLLQLWRGALQKHRLSDATLHTEQHYWSAVQQVLQLLLTEYLEIESVNLAAQRSGTTTVEAAGSQLRLTDYFSKKRPQRQHTKLFRFTGPTAVTPSLQARRHGYPLVCRADPAHLHAVLPALHALCADIEPLTGGGECSLRAFITDYVRTGESERLASIARAAIDEAMRSPSAWRERVPPPATNAKSGERHRVVFACCAYSWQAVHGAMRHARRCGASGGTEAARAVAGTLTPLATQCRACPHAAPPAAARAARWLADDDIVRFLQSLHNWKAMTGDVPETKQSAQELKQAYEREAEILGSSLGDGAVTRKEIISDMNTLADIAVLCETMDWLSANIRSIPSMLSGAIKLSEKFLNDISAAASVFDEITHKCLLFLHLEMRIECFHYLGQEDREGENGSEADSQQSGGAAQLAHALLAFHEHASAVLAPSRLAYIFNGIGEMMSAAVVWRWQGERGAEGGAAARLATLRHCLAALHLPHDGLHRAHAYLHLLACTPQEIITSVREKGAQFTELEYLNAFKVIGVRRNVSSGDMKIHLKQLSTALGHVGVTV

Summary

Description
Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Involved in regulation of synaptic microtubule formation, and also regulation of synaptic growth and glutamate receptor trafficking. Does not appear to be required for basal neurotransmission.
Subunit
The exocyst complex is composed of Sec3/Exoc1, Sec5/Exoc2, Sec6/Exoc3, Sec8/Exoc4, Sec10/Exoc5, Sec15/Exoc6, exo70/Exoc7 and Exo84/Exoc8.
The exocyst complex is composed of EXOC1, EXOC2, EXOC3, EXOC4, EXOC5, EXOC6, EXOC7 and EXOC8. Interacts with BIRC6/bruce (By similarity). Interacts with MYRIP. Interacts with SH3BP1; required for the localization of both SH3BP1 and the exocyst to the leading edge of migrating cells (By similarity).
The exocyst complex is composed of EXOC1, EXOC2, EXOC3, EXOC4, EXOC5, EXOC6, EXOC7 and EXOC8 (By similarity). Interacts with BIRC6/bruce (By similarity). Interacts with MYRIP. Interacts with SH3BP1; required for the localization of both SH3BP1 and the exocyst to the leading edge of migrating cells (By similarity).
Similarity
Belongs to the SEC8 family.
Keywords
Coiled coil   Complete proteome   Exocytosis   Phosphoprotein   Protein transport   Reference proteome   Transport   Acetylation   Cell projection  
Feature
chain  Exocyst complex component 4
EMBL
NWSH01001154    PCG72340.1    ODYU01001879    SOQ38702.1    RSAL01000125    RVE46593.1    + More
GEZM01026226    JAV87132.1    NEVH01005303    PNF38735.1    KK854366    PTY15102.1    DS235845    EEB18474.1    GBXI01014788    JAC99503.1    GAKP01010841    JAC48111.1    APGK01016463    KB739858    ENN82092.1    GAMC01000587    JAC05969.1    GBHO01036831    GBHO01036828    GDHC01004978    JAG06773.1    JAG06776.1    JAQ13651.1    CH477378    EAT42267.1    CP012526    ALC46761.1    APGK01017822    KB740053    KB632360    ENN81811.1    ERL93516.1    CH902617    KPU80453.1    KPU80454.1    KPU80455.1    KPU80450.1    KPU80451.1    KPU80452.1    KPU80456.1    BT150369    AGW52179.1    AY905551    AE014297    AY119660    CM000364    EDX11781.1    CM000160    KRK03961.1    KRK03964.1    EDW97786.2    KRK03962.1    KRK03965.1    KRK03967.1    DS231830    EDS30756.1    CH480821    EDW55014.1    CH479179    EDW25132.1    CH954181    EDV47946.1    CH940650    EDW66975.2    KRF83039.1    KRF83032.1    KRF83038.1    KRF83031.1    KRF83033.1    KRF83034.1    CH916369    EDV93663.1    KRF83035.1    OUUW01000007    SPP83156.1    GFDL01012475    JAV22570.1    GFDL01012453    JAV22592.1    SPP83155.1    CM000070    KRT00545.1    KRT00548.1    KRT00553.1    KRT00551.1    KRT00555.1    KRT00546.1    KRT00544.1    KRT00547.1    EAL28195.2    JXUM01019055    JXUM01019056    KQ560531    KXJ81967.1    GECU01005497    JAT02210.1    JXJN01023829    GBYB01002566    JAG72333.1    GFTR01007934    JAW08492.1    GEDC01000034    JAS37264.1    CH964272    EDW83911.1    ABLF02040311    GBBI01004321    JAC14391.1    KQ971382    EEZ97195.1    LJIG01001216    KRT85724.1    GEBQ01009146    JAT30831.1    CM004470    OCT89261.1    BC094262    AAH94262.1    ACTA01107034    ACTA01115034    ACTA01123034    ACTA01131034    ACTA01139034    ACTA01147033    ACTA01155032    ACTA01163031    ACTA01171029    ACTA01179027    AANG04000096    AABR07060165    AABR07060166    AABR07060167    AABR07060168    AABR07060169    AABR07060170    AABR07060171    AABR07060172    AABR07060173    AABR07060174    U32498    GAMT01006800    GAMS01007446    GAMR01008084    GAMQ01007070    GAMP01000616    JAB05061.1    JAB15690.1    JAB25848.1    JAB34781.1    JAB52139.1    AK173235    BAD32513.1    AF022962    BC034644   
Pfam
PF04048   Sec8_exocyst        + More
PF03096   Ndr
PF02828   L27
Interpro
IPR039682   Sec8/EXOC4        + More
IPR007191   Sec8_exocyst       
IPR029058   AB_hydrolase       
IPR004142   NDRG       
IPR014775   L27_C       
SUPFAM
SSF53474   SSF53474       
Gene 3D

Ontologies

Topology

Subcellular location
Midbody   Colocalizes with CNTRL/centriolin at the midbody ring (By similarity). Localizes at the leading edge of migrating cells (PubMed:21658605).   With evidence from 3 publications.
Midbody ring   Colocalizes with CNTRL/centriolin at the midbody ring (By similarity). Localizes at the leading edge of migrating cells (PubMed:21658605).   With evidence from 3 publications.
Cell projection   Colocalizes with CNTRL/centriolin at the midbody ring (By similarity). Localizes at the leading edge of migrating cells (PubMed:21658605).   With evidence from 3 publications.
Length:
897
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00005
outside
1  -  897
 
 

Population Genetic Test Statistics

Pi
296.445444
Theta
172.42627
Tajima's D
2.163553
CLR
0.359698
CSRT
0.908204589770511
Interpretation
Uncertain
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