Gene

KWMTBOMO13333

Pre Gene Modal

BGIBMGA010952

Annotation

PREDICTED:_E3_SUMO-protein_ligase_NSE2-like_[Plutella_xylostella]

Location

Bomo_Chr22(-):13924159-13926341      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.559

CDS

ATGGCTGATATAGACATTCGAGATCTGAGAAAGCAGTGTATTCAAAGCTTAATCTCGACTGCGGAAAATGTCGCTAAATATTTGCAAGAGGACAAGGAAGACAATTATGAAAAACTTAAGATGTACATGGAAAACTACTGCTTATTGGAAATAGAACAAGAAGTTGCTGAGCAGGTTTTAGAGGCAGCAAAGGCAGATACTAACATATCAAACATAAATACACTCCAAGAAAGATTCGAGGATGGCCTGAAAACTCTTTCACAGAACAGAATTAATCCTAACAGCCATAGATACATGCAAGAATTAAAGACTAGATATGAAAGTGGATTACAAAGTGTATCTTCATCAGGACTTACAGAAAACCTGAATGAATCTGATATAGCTATTGTCCAAACAAATGAGCAGTTTCTAGATCCAATTACCAAAAAACATATATCAGATCCAGTGAAGAATACAATGTGTGGCCATGTGTATGAAAGAGAGACTATTTTGAATCTCATAAGAAGGAAGCATAGAATCAGATGTCCAGTTGCGGGATGTGCCAATCCAGAAAGCATTCAAGAAAACCATCTATTGGAAGATGAAGAATTGAGATTTAGATTATCATTGTCGCAACACTCGACCATGATACATTAA

Protein

MADIDIRDLRKQCIQSLISTAENVAKYLQEDKEDNYEKLKMYMENYCLLEIEQEVAEQVLEAAKADTNISNINTLQERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNESDIAIVQTNEQFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPVAGCANPESIQENHLLEDEELRFRLSLSQHSTMIH

Uniprot

A0A1E1WPD2   A0A2A4JK49   A0A2H1VD27   A0A212F5S7   A0A194RDE6   A0A194PYP2   + More
A0A1B6I6M3   A0A1B6LL20   A0A0A1WUQ7   A0A1B6G2A9   Q8I8I0   B4PR38   Q008Y9   Q8I8H9   Q8I8H8   Q5IF63   Q5IF66   Q5IF67   Q5IF69   W8BRI6  

Pubmed

22118469    26354079    25830018    12466289    17994087    17550304    + More
16916943    15483321    24495485   

EMBL

GDQN01002189    JAT88865.1    NWSH01001154    PCG72341.1    ODYU01001879    SOQ38701.1    + More
AGBW02010144    OWR49078.1    KQ460323    KPJ15863.1    KQ459586    KPI98148.1    GECU01025135    JAS82571.1    GEBQ01015660    GEBQ01005444    JAT24317.1    JAT34533.1    GBXI01015506    GBXI01011961    JAC98785.1    JAD02331.1    GECZ01013194    JAS56575.1    AY150706    AAN78356.1    CM000160    EDW97360.1    DQ888193    ABJ09564.1    AY150709    DQ888186    DQ888187    DQ888194    AAN78359.1    ABJ09557.1    ABJ09558.1    ABJ09565.1    AY150710    DQ888195    DQ888196    AAN78360.1    ABJ09566.1    ABJ09567.1    AY752600    AAW32046.1    AY752597    AAW32043.1    AY752596    AAW32042.1    AY752594    AAW32040.1    GAMC01007097    JAB99458.1   

Proteomes

UP000218220    UP000007151    UP000053240    UP000053268    UP000002282   

PRIDE

Q8I8I0    Q008Y9    Q8I8H9    Q8I8H8    Q5IF63    Q5IF66    + More
Q5IF67    Q5IF69   

Pfam

PF11789   zf-Nse

Interpro

IPR026846   Nse2(Mms21)        + More
IPR004181   Znf_MIZ       
IPR013083   Znf_RING/FYVE/PHD       
IPR003613   Ubox_domain       

Gene 3D

3.30.40.10    

CDD

cd16651  SPL-RING_NSE2

ProteinModelPortal

A0A1E1WPD2   A0A2A4JK49   A0A2H1VD27   A0A212F5S7   A0A194RDE6   A0A194PYP2   + More
A0A1B6I6M3   A0A1B6LL20   A0A0A1WUQ7   A0A1B6G2A9   Q8I8I0   B4PR38   Q008Y9   Q8I8H9   Q8I8H8   Q5IF63   Q5IF66   Q5IF67   Q5IF69   W8BRI6  

PDB

2YU4     E-value=3.94688e-07,     Score=126

KEGG

101736131    K22756 E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] | (RefSeq) E3 SUMO-protein ligase NSE2-like

GO

GO:0008270   GO:0030915   GO:0019789   GO:0000724   GO:0004842   GO:0016874   GO:0005634   GO:0006281   GO:0005874   GO:0007017   GO:0005200   GO:0005525   GO:0031386   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

PANTHER

PTHR21330  

Length:

211

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.14612

outside

1  -  211

 

 

Pi

180.533864

Theta

200.543081

Tajima's D

-0.376675

CLR

0.701776

CSRT

0.272336383180841

Interpretation

Uncertain