Gene

KWMTBOMO13332

Pre Gene Modal

BGIBMGA010911

Annotation

PREDICTED:_rap1_GTPase-GDP_dissociation_stimulator_1-B_[Amyelois_transitella]

Location

Bomo_Chr22(+):13917262-13921933      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.973 Golgi   Reliability : 1.276

CDS

ATGGATGAATGTTCAGCAACGAAATCTACTTCCTTAGAAACGTTGGTTATTCAAAATATAAGTAATGTGAAAGAACTAAAGTCGAAATTAAGTGAAATAATTAAAAAAGGAAAAGACTATGAATTTGATGTTTCTTCGTGCGTCAAGACTTTAATAAAGAGCAACGACCAAGAGATAGTATTCCTGACTGTCGAAGCCATATCAGAGCTCGTTAAATGCGACGAGAAACGTCGAACTTATTCTCAGAAAGAGATAATCAGCCCCATTCTAGATATTCTGCAAAAAGAAATAACTACCGAAAATGCTGCGTTAATAAAACAGTGCTTTCGAGCTCTCGGTAACTTGTGCTGTGACTGTGACTCGTCAAGAAAGATAATCTTGGAATGTGGAGGTGTTCCCAACATAATAAATCTAATGAAAAAATATTTCAGTGCCCACAGTCAATTAAGCATGTATGCATTTAAAACTTTATTAAATTTTGCGATCGGTGGTCAAGAATTCACAAATGCAATGGTTGATGGTGGAGTAGTTGAAATGCTTCAAATGGTTGTCATTCAGGAGCTAGAGAAAGAGGAAATTGATGAAGAGGCTGTTTGTGCTTTGCTTTCCTTATTATCTCTTATCAACGAAAATGATACAGAAATATTGTACAGTGATGAAATTAATGCAGGGGTTTTGAAAGTCCTAACTAATACTGCTGATATTGATGTTTCGGAGTTATGCCTCGATATACTTCATGCCCAAGCTGAGCATGATTCTGTAAAGACCTTAATAGCAAAACATGGTGGTATCCAAGTAGTTTGTTCTCGTATTGAACAGCTAATGCAAAAGTTTGATCACGGAGAACTTGATGCAGATCAATCTGATGTTGAGGCCATCCTGAAGCAAGCTTGTGATTTAATAGTCATTGTTTTGACTGGAGATGAAGCAATGCACATACTATACAACAAAGGTCTCGGTGAAGTTTACATCTCAATGGTAAAATGGCTGGAGCACACTAACTACCACCTAATAACTACAGGTGTCCTTGCTATTGGAAACTTTGCCAGACAAGATGACTATTGTGCACAGATGATGGACGATAAGATATATGATAAATTGTTGGATCTCTTTGATGTATATGTAAGTTTCGGAGTTCAAATGCAAAAGGAACATAGTGTGTTACATCCGATAGAACCTGGAACCATCACAAAGATCCAGCATGCTATATTGTCCGCTCTCCGGAACCTCACGGTGCCTGTGGCGAATAAAAGGATAATAGCGGCTCAGGGAAGGGCTGCGCCTACGTTGCTGGGGGCATTGCTTTCGGTAGAAGATCATCATGTAGCTTACAAACTTCTGGCTGCCATCAGGATGCTTGTTGATGGTCAAGAGAGTGTTGCCCGTCTGTTGGGCCGTCACAAGTCAGCGTTGCGTTGCGTGGCGCGCTGGGGGCACGCGGGGGAGTACGCGGGCGCGGCGGGGGAGGCGCCCCGCCTGCTCGCCTGGGCCGTCAAGCTTCTCACGCGCGGACCCTACTGGCACAATATCGTCGAGGTGGACGGCTGTATATCCAGTTTAGTCAATATGCTGGTGGCCAGTCACTCGCTAATGCAGAACGAAGCCATTCTCGCTCTGACGCTATTAGCTATTGAAACATTAAAAAATATTTCTCCCTCGAGTGAACATCCAGAATTCGATTACGAAAAAAGCTTTATCTCTCAGTTGATTAAGTCGGAAATCGGTAAGCACGTTTCCATACTAGTCGATACGAACTGCGCTAAAATGCCCGTCGAGGTTGCGGAGAACCTTCTCGCCTTCCTAGACATCACTTCGAAGAAGAATAAATTAGCTCTCGATTATAAGGAGGCTAAAGTGACAGAGTCCTTGAAGAAGTTCGCTGAATCCAGACAGGATCTAAGCGAGGATCTCAAAAATTGTATCACTGGTGTAATCGCAGCTATCTCAGACAATGGGAAAGATTAA

Protein

MDECSATKSTSLETLVIQNISNVKELKSKLSEIIKKGKDYEFDVSSCVKTLIKSNDQEIVFLTVEAISELVKCDEKRRTYSQKEIISPILDILQKEITTENAALIKQCFRALGNLCCDCDSSRKIILECGGVPNIINLMKKYFSAHSQLSMYAFKTLLNFAIGGQEFTNAMVDGGVVEMLQMVVIQELEKEEIDEEAVCALLSLLSLINENDTEILYSDEINAGVLKVLTNTADIDVSELCLDILHAQAEHDSVKTLIAKHGGIQVVCSRIEQLMQKFDHGELDADQSDVEAILKQACDLIVIVLTGDEAMHILYNKGLGEVYISMVKWLEHTNYHLITTGVLAIGNFARQDDYCAQMMDDKIYDKLLDLFDVYVSFGVQMQKEHSVLHPIEPGTITKIQHAILSALRNLTVPVANKRIIAAQGRAAPTLLGALLSVEDHHVAYKLLAAIRMLVDGQESVARLLGRHKSALRCVARWGHAGEYAGAAGEAPRLLAWAVKLLTRGPYWHNIVEVDGCISSLVNMLVASHSLMQNEAILALTLLAIETLKNISPSSEHPEFDYEKSFISQLIKSEIGKHVSILVDTNCAKMPVEVAENLLAFLDITSKKNKLALDYKEAKVTESLKKFAESRQDLSEDLKNCITGVIAAISDNGKD

Uniprot

H9JN08   A0A2A4JLP4   A0A3S2LXN4   A0A2H1VCX0   A0A212F5R3   A0A0L7L8E8   + More
A0A194Q414   D6WH32   A0A1Y1NF21   A0A0K8WDW2   W8AYZ1   A0A034W070   A0A0A1WZM9   A0A1I8P7R5   A0A0T6AZM0   A0A1I8MLE0   A0A1L8DMJ5   A0A067QY97   B4MPU6   A0A1B0CRW1   A0A0L0CAM7   A0A1A9WI19   B3MGR8   B5E1D1   A0A0J9R734   B4GCC0   B4HQE6   A0A0M4EFY2   B4J3V7   A0A1W4XSG1   A1Z6S6   A1Z6S7   O44116   A0A1W4VEZ9   B3NAK2   B4MFA9   Q86LF4   B4P1B4   A0A3B0JIL2   B4KU52   F4WJA3   A0A182FEC6   A0A2M4BI12   W5JQZ2   A0A158NEB4   A0A182LUM6   A0A2M4AM01   A0A182RP34   A0A0J7NEZ5   A0A2M4BHD2   A0A3L8DBB6   A0A2M3ZID7   A0A026W5V3   A0A182YBY2   A0A182PQ88   A0A1B6JE39   A0A182UH60   Q7Q9E6   E2A0C9   A0A182HNS2   A0A182HDP9   A0A182X8G9   A0A1Q3F8P2   A0A195BX53   Q17LP7   A0A151WT72   A0A182WMH7   A0A1S4EY80   A0A195FL32   E9J1I1   A0A1B6GG94   A0A182VKH8   A0A182T3B6   A0A182JHJ3   A0A2P8Y1J1   Q8T996   A0A182KGH2   E2C9A2   A0A0C9RCJ9   A0A182QMR3   A0A084W9M5   A0A195CCD2   A0A151J6H7   A0A0A9YZP0   B0W5K1   A0A023EX93   A0A182NV12   B4QDT4   A0A023EWZ0   A0A1J1JAD5   A0A224XLG5   A0A2J7Q7K4   A0A154NY23   A0A0L8HR07  

Pubmed

19121390    22118469    26227816    26354079    18362917    19820115    + More
28004739    24495485    25348373    25830018    25315136    24845553    17994087    26108605    15632085    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    9533953    17550304    21719571    20920257    23761445    21347285    30249741    24508170    25244985    12364791    20798317    26483478    17510324    21282665    29403074    24438588    25401762    26823975    24945155    25474469   

EMBL

BABH01030648    NWSH01001154    PCG72332.1    RSAL01000125    RVE46591.1    ODYU01001879    + More
SOQ38700.1    AGBW02010144    OWR49077.1    JTDY01002353    KOB71604.1    KQ459586    KPI98150.1    KQ971321    EFA00118.1    GEZM01003833    JAV96533.1    GDHF01024590    GDHF01003259    JAI27724.1    JAI49055.1    GAMC01012545    JAB94010.1    GAKP01010868    GAKP01010865    JAC48084.1    GBXI01010171    GBXI01003297    JAD04121.1    JAD10995.1    LJIG01022488    KRT80317.1    GFDF01006453    JAV07631.1    KK853114    KDR11195.1    CH963849    EDW74135.1    AJWK01025352    AJWK01025353    JRES01000678    KNC29290.1    CH902619    EDV36826.2    CM000071    EDY68736.2    CM002911    KMY91886.1    CH479181    EDW31438.1    CH480816    EDW46685.1    CP012524    ALC42351.1    CH916367    EDW01540.1    AE013599    BT125966    AAF57418.1    ADX35945.1    BT044558    AAS64794.1    ACI15753.1    AF034421    AAB87984.1    CH954177    EDV59756.2    CH940667    EDW57278.2    BT004891    AAO47869.1    CM000157    EDW89116.2    OUUW01000001    SPP73066.1    CH933808    EDW08629.2    GL888182    EGI65681.1    GGFJ01003307    MBW52448.1    ADMH02000689    ETN65320.1    ADTU01013237    AXCM01011633    GGFK01008488    MBW41809.1    LBMM01005943    KMQ91075.1    GGFJ01003306    MBW52447.1    QOIP01000010    RLU17626.1    GGFM01007555    MBW28306.1    KK107455    EZA50414.1    GECU01010271    JAS97435.1    AAAB01008900    EAA09487.3    GL435569    EFN73132.1    APCN01002756    JXUM01034642    KQ561031    KXJ79962.1    GFDL01011129    JAV23916.1    KQ976401    KYM92543.1    CH477213    EAT47655.1    KQ982769    KYQ50825.1    KQ981490    KYN41056.1    GL767671    EFZ13316.1    GECZ01008307    JAS61462.1    PYGN01001050    PSN38110.1    AY069865    AAL40010.1    GL453806    EFN75447.1    GBYB01004646    JAG74413.1    AXCN02001010    ATLV01021841    KE525324    KFB46919.1    KQ978023    KYM97891.1    KQ979851    KYN18827.1    GBHO01005107    GBHO01005105    GDHC01006613    JAG38497.1    JAG38499.1    JAQ12016.1    DS231843    EDS35484.1    GAPW01000589    JAC13009.1    CM000362    EDX05946.1    GBBI01005009    JAC13703.1    CVRI01000075    CRL08518.1    GFTR01007156    JAW09270.1    NEVH01017442    PNF24564.1    KQ434781    KZC04481.1    KQ417497    KOF91656.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000037510    UP000053268    + More
UP000007266    UP000095300    UP000095301    UP000027135    UP000007798    UP000092461    UP000037069    UP000091820    UP000007801    UP000001819    UP000008744    UP000001292    UP000092553    UP000001070    UP000192223    UP000000803    UP000192221    UP000008711    UP000008792    UP000002282    UP000268350    UP000009192    UP000007755    UP000069272    UP000000673    UP000005205    UP000075883    UP000075900    UP000036403    UP000279307    UP000053097    UP000076408    UP000075885    UP000075902    UP000007062    UP000000311    UP000075840    UP000069940    UP000249989    UP000076407    UP000078540    UP000008820    UP000075809    UP000075920    UP000078541    UP000075903    UP000075901    UP000075880    UP000245037    UP000075881    UP000008237    UP000075886    UP000030765    UP000078542    UP000078492    UP000002320    UP000075884    UP000000304    UP000183832    UP000235965    UP000076502    UP000053454   

PRIDE

H9JN08    A1Z6S6    A1Z6S7    O44116    Q86LF4    Q8T996    + More

Pfam

PF03224   V-ATPase_H_N        + More
PF09320   DUF1977
PF00226   DnaJ
PF00514   Arm

Interpro

IPR016024   ARM-type_fold        + More
IPR011989   ARM-like       
IPR040144   RAP1GDS1       
IPR000225   Armadillo       
IPR004908   ATPase_V1-cplx_hsu       
IPR001623   DnaJ_domain       
IPR036869   J_dom_sf       
IPR015399   DUF1977_DnaJ-like       

SUPFAM

SSF48371   SSF48371        + More
SSF46565   SSF46565       

Gene 3D

1.25.10.10     1.10.287.110    

CDD

cd06257  DnaJ

ProteinModelPortal

H9JN08   A0A2A4JLP4   A0A3S2LXN4   A0A2H1VCX0   A0A212F5R3   A0A0L7L8E8   + More
A0A194Q414   D6WH32   A0A1Y1NF21   A0A0K8WDW2   W8AYZ1   A0A034W070   A0A0A1WZM9   A0A1I8P7R5   A0A0T6AZM0   A0A1I8MLE0   A0A1L8DMJ5   A0A067QY97   B4MPU6   A0A1B0CRW1   A0A0L0CAM7   A0A1A9WI19   B3MGR8   B5E1D1   A0A0J9R734   B4GCC0   B4HQE6   A0A0M4EFY2   B4J3V7   A0A1W4XSG1   A1Z6S6   A1Z6S7   O44116   A0A1W4VEZ9   B3NAK2   B4MFA9   Q86LF4   B4P1B4   A0A3B0JIL2   B4KU52   F4WJA3   A0A182FEC6   A0A2M4BI12   W5JQZ2   A0A158NEB4   A0A182LUM6   A0A2M4AM01   A0A182RP34   A0A0J7NEZ5   A0A2M4BHD2   A0A3L8DBB6   A0A2M3ZID7   A0A026W5V3   A0A182YBY2   A0A182PQ88   A0A1B6JE39   A0A182UH60   Q7Q9E6   E2A0C9   A0A182HNS2   A0A182HDP9   A0A182X8G9   A0A1Q3F8P2   A0A195BX53   Q17LP7   A0A151WT72   A0A182WMH7   A0A1S4EY80   A0A195FL32   E9J1I1   A0A1B6GG94   A0A182VKH8   A0A182T3B6   A0A182JHJ3   A0A2P8Y1J1   Q8T996   A0A182KGH2   E2C9A2   A0A0C9RCJ9   A0A182QMR3   A0A084W9M5   A0A195CCD2   A0A151J6H7   A0A0A9YZP0   B0W5K1   A0A023EX93   A0A182NV12   B4QDT4   A0A023EWZ0   A0A1J1JAD5   A0A224XLG5   A0A2J7Q7K4   A0A154NY23   A0A0L8HR07  

PDB

5XGC     E-value=3.89789e-35,     Score=373

KEGG

101736263    no KO assigned | (RefSeq) rap1 GTPase-GDP dissociation stimulator 1-A

GO

GO:0005096   GO:0000221   GO:0046961   GO:0015991   GO:0005829   GO:0043547   GO:1901216   GO:0005623   GO:0042052   GO:0046716   GO:0005886   GO:0016021   GO:0005488   GO:0005874   GO:0007017   GO:0005200   GO:0005525   GO:0031386   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

PANTHER

PTHR10957  

Length:

654

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.14274

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00724

outside

1  -  654

 

 

Pi

176.965537

Theta

186.487362

Tajima's D

-0.532261

CLR

1.843668

CSRT

0.24108794560272

Interpretation

Uncertain