SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13330
Pre Gene Modal
BGIBMGA004682
Annotation
PREDICTED:_uncharacterized_protein_ZK1073.1_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.234 Nuclear   Reliability : 1.84
 

Sequence

CDS
ATGCCAATGATAATAGCTGAATTAGAAATGAAAATGAAAATAGCGGCGAACTTCATCAACAAATATGTGGTCAGCACCGACCGGAGTGGAGACATACATGTTCATGTACAAGGGGATCTGACTCAGCAGGATAAAAGATGTGTCTTCCTGACCGTTCACGACTTAGGCACCAACCATTCATCAATGGTGGACTTCGTGAACAGTCCAGCTATGTCAGAGATCAAGGAGAGGTCCTGCTTCATCCACATCGATGTGCCAGGCCACGAAGAAAACTCTCCGGATTTACCTGATTCGTATCAATTCCCTTCACTCCAGACTCTGGGTGAGGACTTGGTAACGGTACTGGATTTCCTCCACATCCGCTATGCAGTAGGTATAGGAGAGGGTGCCGGTGCCAATATTCTGGCTAGATGTGGGCTTGCCCATCCTCGCCGTCTTCTCGGATTGGTCCTCGTCAACTGTACCGCATCCACTTCTTCTGTAGCTGATGCCTTCAGAAGCAGGTTCTCAAGATGGAGGGGAGCAGATATCTCTCAGTCCGAAGAGGACTTCCTGATTTACCATAAGTTTGGACATCAAATCTCTAGCGATTCGTGCGAACCGAATGAAAAAGATCGCATGCTGGCGGAATACCGGTCCCGGCTTCGCGGCAATCTCAACCCGCACAACATCAAGCTCTTTGTTAGAGCTTTTATCAACCGGAAAGACCTTCTCCTGAAAGGTTGCCGACCTGATATCTTGCTCATCACGGGAACGCTGAGTCCCTATAGCAGCGTCATCGAGAAACTCTACAAGGAGCTCGATCGGGACAGAGTCACTATACTGAAAGTCGAGAAAGTCGGTGACGTATTGGCCGAAGCGCCCGCCAAAGTGGCGCAGTCACTCCTCTTGTTCTGCCAAGGACAAGGTCAGCTGACGTCCCTCCCGCCGCCCGGCGTTGAGAGGCGCATGTCCCGCGCCATGTCCATGGAGGAGTACGACAAGCCCAACATCAGGCGGCTCTCCCTCACGCCGAGCGTGGCCGATTCTCCGCCGCACACAAAGCTCTAG
Protein
MPMIIAELEMKMKIAANFINKYVVSTDRSGDIHVHVQGDLTQQDKRCVFLTVHDLGTNHSSMVDFVNSPAMSEIKERSCFIHIDVPGHEENSPDLPDSYQFPSLQTLGEDLVTVLDFLHIRYAVGIGEGAGANILARCGLAHPRRLLGLVLVNCTASTSSVADAFRSRFSRWRGADISQSEEDFLIYHKFGHQISSDSCEPNEKDRMLAEYRSRLRGNLNPHNIKLFVRAFINRKDLLLKGCRPDILLITGTLSPYSSVIEKLYKELDRDRVTILKVEKVGDVLAEAPAKVAQSLLLFCQGQGQLTSLPPPGVERRMSRAMSMEEYDKPNIRRLSLTPSVADSPPHTKL

Summary

EMBL
BABH01039687    RSAL01000125    RVE46589.1    AGBW02012471    OWR45005.1    KQ460323    + More
KPJ15857.1    ODYU01012310    SOQ58564.1    GEYN01000178    JAV44811.1    CVRI01000047    CRK98517.1    GGFK01002581    MBW35902.1    GFDF01010077    JAV04007.1    GGFL01003953    MBW68131.1    CRK98519.1    GFDF01010079    JAV04005.1    GAMC01011228    GAMC01011226    JAB95329.1    GGFL01004739    MBW68917.1    GGFM01000588    MBW21339.1    GGFJ01006688    MBW55829.1    GFDF01010080    JAV04004.1    GGFM01000614    MBW21365.1    GGFK01002648    MBW35969.1    GFDF01010081    JAV04003.1    GFDF01010078    JAV04006.1    AAAB01008879    EGK96981.1    NEVH01009368    PNF33493.1    GAMC01011227    JAB95328.1    JXJN01024988    GGFM01000609    MBW21360.1    GGFJ01006608    MBW55749.1    GAMC01011229    JAB95326.1    GGFM01006518    MBW27269.1    DS231830    EDS30754.1    KA646084    AFP60713.1    ADMH02002074    ETN59562.1    GGFM01000654    MBW21405.1    CRK98516.1    GAKP01012178    JAC46774.1    GAKP01012174    JAC46778.1    AXCN02000163    KK852435    KDR23936.1    GFDL01006010    JAV29035.1    GAKP01012175    JAC46777.1    EZ424230    ADD20506.1    GFDL01005908    JAV29137.1    EGK96982.1    GFDF01010042    JAV04042.1    CRK98518.1    EAA08379.5    GFDL01005900    JAV29145.1    GFDL01006286    JAV28759.1    CH477378    EAT42265.1    GFDL01006302    JAV28743.1    GAKP01012176    JAC46776.1    GFDL01006482    JAV28563.1    GDHF01004389    JAI47925.1    GDHF01023239    JAI29075.1    GFDL01006490    JAV28555.1    GBXI01009729    JAD04563.1    GAKP01012177    JAC46775.1    GDHF01033783    JAI18531.1    GBXI01015959    JAC98332.1    CH916369    EDV93662.1    UFQT01000344    SSX23403.1    BT126191    AEA30994.1    CH940650    KRF83037.1    GANO01000186    JAB59685.1    KRF83036.1    AE014297    AAF51958.1    AAN14318.1    ACZ94815.1    CH479179    EDW25133.1    CH480821    EDW55015.1    AY060319    AAL25358.1    AAN14317.2    CM000364    EDX11782.1    AF145604    AAD38579.1    ACZ94812.1    CH964272    KRF99920.1    CM000070    KRT00550.1    CCAG010012181    CCAG010012182    KRT00554.1    CP012526    ALC46762.1    KRT00549.1    KRT00552.1    CH954181    EDV47947.1    EDW83909.2    GGMS01009045    MBY78248.1   
Pfam
PF03096   Ndr        + More
PF00106   adh_short
Interpro
IPR029058   AB_hydrolase        + More
IPR004142   NDRG       
IPR002347   SDR_fam       
IPR036291   NAD(P)-bd_dom_sf       
SUPFAM
SSF53474   SSF53474        + More
SSF51735   SSF51735       
Gene 3D
PDB
2XMQ     E-value=9.47957e-26,     Score=289

Ontologies

GO

Topology

Length:
349
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0446800000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00475
outside
1  -  349
 
 

Population Genetic Test Statistics

Pi
197.524149
Theta
171.636257
Tajima's D
0.505974
CLR
1.894523
CSRT
0.516774161291935
Interpretation
Uncertain
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