SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13325
Pre Gene Modal
BGIBMGA004684
Annotation
carboxylesterase_[Cnaphalocrocis_medinalis]
Full name
Carboxylic ester hydrolase      
Location in the cell
Cytoplasmic   Reliability : 2.358
 

Sequence

CDS
ATGAGATGTGGAGTTAGACAGCATATTAAAATCATCTCATTCGCTGTGTCCAACCTCGTAAACCCTGCCAAGGATAATCCACTGGTGACAGTTGAACAAGGAACTCTAAGAGGCTCTAAGAAAACCCTACTCGATGGATCCCCATACTACAGTTTTAAGGGAATTCCTTATGCAGAACCACCTATTGGAGAGCTCAGATTTCAGGCGCCAAAACCTCGTAAGCCGTGGAATGGGGTCCTTGATGCTGTCGAGCACGGACCCGTGTGTCCTCAATATGACATTAGTACTTCTTCAACGATTGAAGGAAACGAAGATTGTTTGTATTTAAACGTTTATACCAGATCTTTACAGTCGGATAGTAAAATACCAGTCATGGTATACATTCACGGCGGAGGCTACTCGTCTGGTTCGGGCAATTCGGGAATGTACGGCCCGGAGTTCATTATTCAGCACAACGTTGTTCTGGTCACGATAAACTATAGACTCGAACTTTTGGGTTTTCTTAGTTTAGACACGGCCGAAGTTCCAGGCAACGCCGGGATGAAGGATCAGGTTGCCGCGTTGCGATGGGTCAAAGGTAACATCGTAAGGTTTGGCGGTGATCCTGATAATGTAACAATTTTCGGGGAAAGTGCGGGGGCCGCGTCCGTCACGTATCACATGCTTTCACCAATGTCGAAAGGTCTGTTCCATAAGGTAATCGCTCAAAGCGGTGTTTGTATTAACGACTGGGCGATAGGCAACAAAACCTTGGAAAGAGTATACAGAGTTGCGAATTTATTAGGTAAAGAGTGTAGTGATGTACAAGATTTGTTGGAGTTTTTGAGGAGCGTTGATCCTCTCAAGCTAACCTGCGTGACTTACAGAACAAGGACGCAAGATGAAAAGTACAGAGGACTGCCAATGTACTTTGTTCCGATTGTAGAGAAGAAATTCGATGGTGTCGAAGCATTTTTGAGCGAGGAACCAATCGAGACGCTTATGTCTGGTAATATTAACAACGTACCGATACTGTTGGGCTACAATAAATCTGAAGGAGTGTTGATGGTGGCGGATGTATTAAAAAAAAAAGAAATTATGAACGAAAAGCCTTCGTTTATTGTACCTAGGGAAATAGCGCAAACCGTTTCCGAAGAGAAAATAAAGGAATTTGGTGAGAGGATCAAGAGATTTTACTTTGGTGACGAGGGAATATCAGCGGACAACACAGCAACAATTGTCGATTTTCAAACAGATCTCTATTTTGCATACAACGTCCATAGATTTGCATATTTATACAGCGTTTACAATTATCCAATTTATTTATACAGATTCGATTATGAAACTGAATTGAATTTCATTAAAAACGCGTTAGGCCAGGGCGGAATAAAAGGTGCAGCCCACGCCGACGACCTGTTCTATTTCTTTTACAATCCCATAAACAAACATTTGATTGGAGATGAGCGATTGAAGATAATAATTTACGAAGTAACGAAACTTTGGACTGATTTTAGTAAAACGGGAAATCCAACACCGGACAACGCTTTGGGTGTCAAATGGTATCCGTACAGCGTGAACGGGAACAAAATTATGTTTTTGGATGAGCCTTTGAGATTCGAACAATGCTTTGAAATTGATAGGGTCGATTTTTGGAACAAACTGTACTCGGAAGCAGGCAGGCCGTGTATTAAAAAAAGCAATTTATGA
Protein
MRCGVRQHIKIISFAVSNLVNPAKDNPLVTVEQGTLRGSKKTLLDGSPYYSFKGIPYAEPPIGELRFQAPKPRKPWNGVLDAVEHGPVCPQYDISTSSTIEGNEDCLYLNVYTRSLQSDSKIPVMVYIHGGGYSSGSGNSGMYGPEFIIQHNVVLVTINYRLELLGFLSLDTAEVPGNAGMKDQVAALRWVKGNIVRFGGDPDNVTIFGESAGAASVTYHMLSPMSKGLFHKVIAQSGVCINDWAIGNKTLERVYRVANLLGKECSDVQDLLEFLRSVDPLKLTCVTYRTRTQDEKYRGLPMYFVPIVEKKFDGVEAFLSEEPIETLMSGNINNVPILLGYNKSEGVLMVADVLKKKEIMNEKPSFIVPREIAQTVSEEKIKEFGERIKRFYFGDEGISADNTATIVDFQTDLYFAYNVHRFAYLYSVYNYPIYLYRFDYETELNFIKNALGQGGIKGAAHADDLFYFFYNPINKHLIGDERLKIIIYEVTKLWTDFSKTGNPTPDNALGVKWYPYSVNGNKIMFLDEPLRFEQCFEIDRVDFWNKLYSEAGRPCIKKSNL

Summary

Similarity
Belongs to the type-B carboxylesterase/lipase family.
Feature
chain  Carboxylic ester hydrolase
EC Number
3.1.1.-
EMBL
BABH01039690    BABH01039691    KP001159    AJN91204.1    ODYU01012558    SOQ58953.1    + More
JTDY01002474    KOB71338.1    KU375439    APD13881.1    FJ997318    ADF43483.1    MF687553    ATJ44479.1    MF687632    ATJ44558.1    NWSH01000459    PCG76250.1    PCG76251.1    KX015867    ARM65396.1    KQ459586    KPI98095.1    KQ460323    KPJ15911.1    KP938878    AKS40359.1    JN019808    AEJ18172.1    KY021856    AQY62745.1    KY021869    AQY62758.1    KPJ15910.1    KX015866    ARM65395.1    KOB71341.1    KPJ15853.1    GCVX01000033    JAI18197.1    KPI98158.1    KY021878    AQY62767.1    RSAL01000125    RVE46587.1    KOB71339.1    ODYU01000269    SOQ34744.1    BABH01033219    EU255790    ABX46627.1    KX015868    ARM65397.1    KU215373    AMB19667.1    HQ122616    AEL33699.1    GCVX01000034    JAI18196.1    KY021882    AQY62771.1    KQ459592    KPI96776.1    KP938875    AKS40356.1    KX015872    ARM65401.1    MF687633    ATJ44559.1    NWSH01003954    PCG65624.1    GEYN01000043    JAV02086.1    MF687564    ATJ44490.1    KQ460313    KPJ16032.1    GCVX01000040    JAI18190.1    KX015873    ARM65402.1    KX015845    ARM65374.1    KU215369    AMB19663.1    KF960791    AII21993.1    GCVX01000041    JAI18189.1    KQ459144    KPJ03728.1    HQ199328    ADX30519.1    KU215371    AMB19665.1    KQ460845    KPJ12017.1    KF849357    AHJ81320.1    KX015869    ARM65398.1    NWSH01001642    PCG70596.1    RSAL01000139    RVE46156.1    JX489387    GEYN01000055    AFQ20792.1    JAV02074.1    MF687624    ATJ44550.1    KY021826    AQY62715.1    KY304476    AUN86407.1    KP114631    AJP62543.1    NEVH01002552    PNF42100.1    KZ150061    PZC74213.1    KF960778    AII21980.1    FJ652446    ACV60230.1    KX015871    ARM65400.1    KU375427    APD13869.1    KM008609    AIN76405.1    GEYN01000026    JAV02103.1    KQ459595    KPI95848.1    KF960782    AII21984.1    KY021833    AQY62722.1    KY021861    AQY62750.1    PCG70597.1    PZC74214.1    RSAL01000002    RVE55035.1    RVE55088.1    PNF42151.1    PNF42152.1    KU215366    AMB19660.1    JTDY01007971    KOB64827.1    KPI95949.1    PNF42092.1    KK852415    KDR24383.1    MF687557    ATJ44483.1    PNF42088.1    MF687626    ATJ44552.1    KPJ16038.1    GQ180944    ACT53736.1    ODYU01009893    SOQ54612.1    ODYU01001848    SOQ38619.1    KY021834    AQY62723.1    GEYN01000056    JAV02073.1    FJ997315    ADF43480.1    KZ149909    PZC78161.1    PNF42095.1    PNF42130.1    DQ445461    ABE01157.2   
Pfam
PF00135   COesterase
Interpro
IPR019819   Carboxylesterase_B_CS        + More
IPR019826   Carboxylesterase_B_AS       
IPR002168   Lipase_GDXG_HIS_AS       
IPR002018   CarbesteraseB       
IPR029058   AB_hydrolase       
IPR000997   Cholinesterase       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
5TYM     E-value=1.42867e-89,     Score=842

Ontologies

Topology

Length:
561
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.1607
Exp number, first 60 AAs:
0.00117
Total prob of N-in:
0.01086
outside
1  -  561
 
 

Population Genetic Test Statistics

Pi
194.349966
Theta
171.042446
Tajima's D
0.320165
CLR
0.662741
CSRT
0.466226688665567
Interpretation
Uncertain
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