SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13314  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012412
Annotation
PREDICTED:_protein_fem-1_homolog_CG6966_isoform_X2_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.464 Nuclear   Reliability : 1.868
 

Sequence

CDS
ATGTACCGGACACACTTTGAAACGGCAAAGACTCCGGGCGAAGAGAAGACTAAGAAATCAGCGGACGTGTTCGGCGACCTGCTGGGCAGCCAGGGGTACGAGTTCGCGAGCAAACGCGACACCGGACCCAAGACTATGAACGCCATGAGGAAAGTCGAGATGGCGCAAACCATGGACCCGGAGAAACTCAAGATCTATGAATGGACGGAGGGGAAGAAGGCCAACATCCGCGCCCTCCTGTGCTCGCTGCACACGGTGGTGTGGGAGGACTGCCGCTGGAGCCGCTGCGAGATGTCGCAGCTCGTCTCCCCCGCCGACGTCAAACGGAACTACAGGAAAGCGTGTCTAGCCGTGCACCCTGATAAACAAGTGGGAACATCGAACGAGAACATAGCTAAAATGATATTTATGGAACTGAACAATGCGTGGAGCGATTTCGAAAACGACACTAAACAACAGAACCTATTCCAATCTTAA
Protein
MYRTHFETAKTPGEEKTKKSADVFGDLLGSQGYEFASKRDTGPKTMNAMRKVEMAQTMDPEKLKIYEWTEGKKANIRALLCSLHTVVWEDCRWSRCEMSQLVSPADVKRNYRKACLAVHPDKQVGTSNENIAKMIFMELNNAWSDFENDTKQQNLFQS

Summary

EMBL
BABH01033814    BABH01033815    KQ459586    KPI98057.1    ODYU01003555    SOQ42472.1    + More
KZ150103    PZC73480.1    KQ460883    KPJ11249.1    LJIG01001528    KRT85412.1    GECU01020521    JAS87185.1    GECZ01032424    JAS37345.1    KQ971371    EFA09916.1    GEDC01016550    JAS20748.1    GEDC01015990    JAS21308.1    DS235019    EEB10557.1    GEBQ01002103    JAT37874.1    AGBW02008829    OWR52439.1    GEZM01073728    GEZM01073727    JAV64908.1    GAIX01007908    JAA84652.1    PYGN01000198    PSN51436.1    KB632100    ERL88847.1    APGK01041757    KB740997    ENN75844.1    GANO01000205    JAB59666.1    KK854366    PTY15104.1    GAMC01014314    JAB92241.1    NNAY01003085    OXU20010.1    GBXI01002303    JAD11989.1    JR040175    AEY59013.1    JRES01001623    KNC21390.1    GFDF01006399    JAV07685.1    NEVH01006582    PNF37548.1    KQ414756    KOC61652.1    KQ980368    KYN16339.1    GDHF01014263    JAI38051.1    KK107024    QOIP01000004    EZA62305.1    RLU24082.1    KQ981522    KYN40619.1    JXJN01007687    ADTU01026589    PNF37550.1    PNF37552.1    KK852470    KDR23238.1    PNF37553.1    PNF37551.1    KQ982481    KYQ55989.1    CH477340    EAT43105.1    GGFM01002726    MBW23477.1    GDUN01000153    JAN95766.1    CH964232    EDW81445.2    KZ288266    PBC30152.1    KQ976504    KYM82862.1    KQ977771    KYN00037.1    GL765283    EFZ16727.1    OUUW01000014    SPP88322.1    GL452067    EFN77984.1    JR040176    AEY59014.1    CH916369    EDV92666.1    GAKP01017690    JAC41262.1    SPP88323.1    CH933806    EDW15300.1    AXCM01003114    DS232003    EDS31350.1    SPP88324.1    KQ435760    KOX75578.1    GL888285    EGI63215.1    CM000160    EDW95623.1    KQ434868    KZC09191.1    GBYB01005317    JAG75084.1    CCAG010001986    GBYB01005319    JAG75086.1    GDIP01058684    JAM45031.1    APCN01003160    CP012526    ALC46161.1    AAAB01008844    EAA06048.5    CH940656    EDW58685.1    ATLV01025890    KE525402    KFB52665.1    PBC30153.1    GL437468    EFN70438.1    GDIP01090823    JAM12892.1    GFDL01009388    JAV25657.1    CH902617    EDV41873.1    CH954181    EDV47744.1    SPP88321.1    GGFJ01000656    MBW49797.1    GDIP01069240    JAM34475.1    GDIP01114674    JAL89040.1   
Pfam
PF00226   DnaJ        + More
PF13606   Ank_3
PF10409   PTEN_C2
PF00069   Pkinase
PF00651   BTB
Interpro
IPR036869   J_dom_sf        + More
IPR036770   Ankyrin_rpt-contain_sf       
IPR020683   Ankyrin_rpt-contain_dom       
IPR002110   Ankyrin_rpt       
IPR001623   DnaJ_domain       
IPR014020   Tensin_C2-dom       
IPR029021   Prot-tyrosine_phosphatase-like       
IPR029023   Tensin_phosphatase       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR000719   Prot_kinase_dom       
IPR000210   BTB/POZ_dom       
IPR011333   SKP1/BTB/POZ_sf       
IPR017441   Protein_kinase_ATP_BS       
SUPFAM
SSF46565   SSF46565        + More
SSF48403   SSF48403       
SSF52799   SSF52799       
SSF56112   SSF56112       
SSF54695   SSF54695       
Gene 3D
PDB
1N4C     E-value=5.23478e-35,     Score=364

Ontologies

Topology

Length:
158
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00096
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.38851
outside
1  -  158
 
 

Population Genetic Test Statistics

Pi
190.202367
Theta
60.759187
Tajima's D
0.829623
CLR
2.510266
CSRT
0.608869556522174
Interpretation
Uncertain
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