Gene

KWMTBOMO13313

Pre Gene Modal

BGIBMGA014074

Annotation

PREDICTED:_pre-mRNA-splicing_factor_ISY1_homolog_[Papilio_xuthus]

Location

Bomo_Chr22(+):13399443-13409157      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.384

CDS

ATGGCCAGAAACGCAGAGAAAGCAATGACAACACTAGCACGTTGGCGTGCGGCACAAGTTCAGGAAGCGGGAGGCCAGCGAGAACGACGTCCGTATCTTGCATCAGAATGTAATGATTTACCACAAGCCGAGAAGTGGAGGTTACAGATTGTCAGAGAAATTGCGAAAAAAGTGGCACAGATACAGAATGCCGGTCTCGGAGAGTTCCGGATTCGCGATCTTAACGACGAAATTAATAAACTTATGAGGGAGAAGCGACATTGGGAGGTTCAAATTAAATCTTTGGGCGGTCCCGATCATGCTCGAGTCGGTCCTAAAATGTTGGACCAAGACGGGAAAGAAGTGCCTGGCAACCGGGGATACAAATACTTTGGAGCTGCAAAGGATTTACCCGGCGTGCGAGAGCTATTCGAACAAGAGCCGCCCCCGCCCCCTCGCCGGACGAGAGCGGACCTCATGAGAGACGTCGACGCAGATTACTACGGCTACAGAGACGACGACGACGGCATTTTACTACCATTAGAACAAGAGGCTGAAAAAGCAGCGATAGCACGTGCAGTCGATGAATGGAAAAGAAACAAGGAACTCAACAAAGATCAAGACCTTCCCGAAGAGGAAAATATTTATCCTGAAGATCCGGATGACAAGAGGATGGAAGACGATGAAGAAGAACCCGAGAAAGCAACGGTCACCTCCCACGTGGCCGTGCCGTCGCAGAGGGACGTCGAAGAAGCATTGCTCAGGAGGAAGAAGCAGGAACTAATGGAGAAATATGGATGCCTAGACGCCAAAATAGAGAAGAGCTGA

Protein

MARNAEKAMTTLARWRAAQVQEAGGQRERRPYLASECNDLPQAEKWRLQIVREIAKKVAQIQNAGLGEFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQDGKEVPGNRGYKYFGAAKDLPGVRELFEQEPPPPPRRTRADLMRDVDADYYGYRDDDDGILLPLEQEAEKAAIARAVDEWKRNKELNKDQDLPEEENIYPEDPDDKRMEDDEEEPEKATVTSHVAVPSQRDVEEALLRRKKQELMEKYGCLDAKIEKS

Uniprot

S4PF19   A0A3S2PEP9   A0A067R926   A0A1B6CKF9   A0A2J7QYK9   A0A023GHS6   + More
G3ML33   A0A224YWB3   A0A1S4FFS8   A0A131Z352   A0A1Y1LWS6   L7M5T9   A0A2H1VNR3   A0A182GRL7   B7P3U9   E9G232   A0A0V0GBA2   A0A2M4AXB9   A0A194PYF9   A0A182J9R0   A0A182W1C0   Q173A1   A0A2M4AWF5   A0A3B3QUC2   A0A182M0R5   A0A182FPD2   D6WZG2   T1IVC2   J3JU20   A0A2W1BE70   A0A2M4BWL5   A0A182UWN1   W5JQK8   B0X8S7   A0A2M4BWK6   A0A1L8DGM4   A0A182TL20   A0A194R1X2   A0A182RV78   A0A1B0CNK7   Q28FR1   A0A182QL39   A0A2M4BWM8   A0A0P4VTB9   R4G3N3   A0A182L756   A0A0P5NPK6   A0A0P6AMJ4   A0A0P6JCD2   A0A164QM58   A0A1B6KEE7   A0A1Q3F8F0   A4FUN5   Q6P811   A0A182ND19   A0A069DSE7   A0A0P4WKB5   A0A1B6H2F0   W5KD90   A0A3Q1CSB7   A0A182JXU6   A0A3B4DGQ1   A0A3Q3RZB9   A0A2M4AWB6   L7LVZ1   W5U7V1   A0A1A9VAG6   A0A1A9Y0Z8   A0A0E9WZC6   A0A1W4Z8K7   A0A3Q3K9N1   A0A1B0G3S8   A0A2D4M847   A0A2H6NDG9   A0A1B0BML6   A0A0L8HFA9   A0A212FFD2   G3WXW5   F7CDJ5   A0A1B0A0F6   B4JF55   G3NGE9   A0A3B4Z171   A0A0A9XZY8   V9L0I9   A0A3B4V3B8   A0A1W4W234   W5N9D7   A0A3P9I932   A0A1U7S3W6   A0A1J1HL55   A0A182P002   A0A026WWN0   A0A2A3EPV4   H3A5X8   A0A1A9W3U0   A0A369S8B8   A0A0N0BDV9   A0A218UPQ0   B4PSL2  

Pubmed

23622113    24845553    22216098    28797301    26830274    28004739    + More
25576852    26483478    21292972    26354079    17510324    29240929    18362917    19820115    22516182    23537049    28756777    20920257    23761445    27129103    20966253    23594743    26334808    25329095    23127152    25613341    22118469    21709235    17495919    17994087    25401762    26823975    24402279    17554307    24508170    9215903    30042472    17550304   

EMBL

GAIX01004242    JAA88318.1    RSAL01000068    RVE49287.1    KK852617    KDR20169.1    + More
GEDC01023430    JAS13868.1    NEVH01009087    PNF33671.1    GBBM01001951    JAC33467.1    JO842584    AEO34201.1    GFPF01010751    MAA21897.1    GEDV01002718    JAP85839.1    GEZM01045005    JAV77984.1    GACK01005614    JAA59420.1    ODYU01003555    SOQ42471.1    JXUM01082717    KQ563332    KXJ74036.1    ABJB010635580    DS630485    EEC01271.1    GL732530    EFX86176.1    GECL01000697    JAP05427.1    GGFK01012125    MBW45446.1    KQ459586    KPI98058.1    CH477428    EAT41127.1    GGFK01011806    MBW45127.1    AXCM01002342    KQ971372    EFA10422.1    JH431580    APGK01043341    BT126731    KB741014    KB632381    AEE61693.1    ENN75430.1    ERL94157.1    KZ150103    PZC73479.1    GGFJ01008325    MBW57466.1    ADMH02000740    ETN65195.1    DS232500    EDS42669.1    GGFJ01008324    MBW57465.1    GFDF01008481    JAV05603.1    KQ460883    KPJ11250.1    AJWK01020464    CR761820    CAJ81535.1    AXCN02001574    GGFJ01008336    MBW57477.1    GDKW01001369    JAI55226.1    ACPB03000886    GAHY01001516    JAA75994.1    GDIQ01139597    GDIQ01071271    JAL12129.1    GDIP01029014    JAM74701.1    GDIQ01019486    JAN75251.1    LRGB01002384    KZS07877.1    GEBQ01030178    JAT09799.1    GFDL01011201    JAV23844.1    CR855375    BC115265    AAI15266.1    BC061420    AAH61420.1    GBGD01002233    JAC86656.1    GDIP01255131    JAI68270.1    GECZ01000903    JAS68866.1    GGFK01011768    MBW45089.1    GACK01010025    JAA55009.1    JT407682    AHH38076.1    GBXM01012863    JAH95714.1    CCAG010008228    IACM01081540    LAB29026.1    IACI01085660    LAA29926.1    JXJN01016980    KQ418303    KOF87892.1    AGBW02008829    OWR52438.1    AEFK01085662    AEFK01085663    CH916369    EDV93336.1    GBHO01017222    GBRD01013665    GDHC01017902    JAG26382.1    JAG52161.1    JAQ00727.1    JW872240    AFP04758.1    AHAT01015112    AHAT01015113    CVRI01000009    CRK88667.1    KK107078    EZA60467.1    KZ288194    PBC33823.1    AFYH01150890    AFYH01150891    NOWV01000042    RDD43148.1    KQ435848    KOX71018.1    MUZQ01000195    OWK55588.1    CM000160    EDW96472.1   

Proteomes

UP000283053    UP000027135    UP000235965    UP000069940    UP000249989    UP000001555    + More
UP000000305    UP000053268    UP000075880    UP000075920    UP000008820    UP000261540    UP000075883    UP000069272    UP000007266    UP000019118    UP000030742    UP000075903    UP000000673    UP000002320    UP000075902    UP000053240    UP000075900    UP000092461    UP000075886    UP000015103    UP000075882    UP000076858    UP000000437    UP000075884    UP000018467    UP000257160    UP000075881    UP000261440    UP000261640    UP000221080    UP000078200    UP000092443    UP000192224    UP000261600    UP000092444    UP000092460    UP000053454    UP000007151    UP000007648    UP000002280    UP000092445    UP000001070    UP000007635    UP000261360    UP000261420    UP000192221    UP000018468    UP000265200    UP000189705    UP000183832    UP000075885    UP000053097    UP000242457    UP000008672    UP000091820    UP000253843    UP000053105    UP000197619    UP000002282   

Pfam

PF06246   Isy1

Interpro

IPR009360   Isy1        + More
IPR029012   Helix_hairpin_bin_sf       
IPR037200   Isy1_sf       

SUPFAM

SSF140102   SSF140102       

Gene 3D

1.10.287.660    

ProteinModelPortal

S4PF19   A0A3S2PEP9   A0A067R926   A0A1B6CKF9   A0A2J7QYK9   A0A023GHS6   + More
G3ML33   A0A224YWB3   A0A1S4FFS8   A0A131Z352   A0A1Y1LWS6   L7M5T9   A0A2H1VNR3   A0A182GRL7   B7P3U9   E9G232   A0A0V0GBA2   A0A2M4AXB9   A0A194PYF9   A0A182J9R0   A0A182W1C0   Q173A1   A0A2M4AWF5   A0A3B3QUC2   A0A182M0R5   A0A182FPD2   D6WZG2   T1IVC2   J3JU20   A0A2W1BE70   A0A2M4BWL5   A0A182UWN1   W5JQK8   B0X8S7   A0A2M4BWK6   A0A1L8DGM4   A0A182TL20   A0A194R1X2   A0A182RV78   A0A1B0CNK7   Q28FR1   A0A182QL39   A0A2M4BWM8   A0A0P4VTB9   R4G3N3   A0A182L756   A0A0P5NPK6   A0A0P6AMJ4   A0A0P6JCD2   A0A164QM58   A0A1B6KEE7   A0A1Q3F8F0   A4FUN5   Q6P811   A0A182ND19   A0A069DSE7   A0A0P4WKB5   A0A1B6H2F0   W5KD90   A0A3Q1CSB7   A0A182JXU6   A0A3B4DGQ1   A0A3Q3RZB9   A0A2M4AWB6   L7LVZ1   W5U7V1   A0A1A9VAG6   A0A1A9Y0Z8   A0A0E9WZC6   A0A1W4Z8K7   A0A3Q3K9N1   A0A1B0G3S8   A0A2D4M847   A0A2H6NDG9   A0A1B0BML6   A0A0L8HFA9   A0A212FFD2   G3WXW5   F7CDJ5   A0A1B0A0F6   B4JF55   G3NGE9   A0A3B4Z171   A0A0A9XZY8   V9L0I9   A0A3B4V3B8   A0A1W4W234   W5N9D7   A0A3P9I932   A0A1U7S3W6   A0A1J1HL55   A0A182P002   A0A026WWN0   A0A2A3EPV4   H3A5X8   A0A1A9W3U0   A0A369S8B8   A0A0N0BDV9   A0A218UPQ0   B4PSL2  

PDB

6FF7     E-value=2.47617e-63,     Score=612

KEGG

101741771    K12870 pre-mRNA-splicing factor ISY1 | (RefSeq) uncharacterized LOC101741771

PATHWAY

03040    Spliceosome - Bombyx mori (domestic silkworm)

GO

GO:0000350   GO:0071020   GO:0000974   GO:0000389   GO:0071013   GO:0071014  

PANTHER

PTHR13021  

Length:

268

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.18778

outside

1  -  268

 

 

Pi

197.876379

Theta

157.387807

Tajima's D

0.383612

CLR

0.154146

CSRT

0.48057597120144

Interpretation

Uncertain