SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13311  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004672
Annotation
PREDICTED:_ran-binding_protein_3_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.232
 

Sequence

CDS
ATGTCGGTTGTTCGCGTGGGAGGCGGGCAGCTGGCGGGAGCGCGGGCGCGGCGTGCTGCGGCTCAACGAGTGCGGCGGCGGCGGGGCGGGGCGGCGGGGGGCGGGGGCGCGCGGCTCGTGGTGCGCGTGGCGGGCTCGCTGCGGGTCGTGCTCAACACCAAGCTGTGGCCCGACATGCTGGCCGACCAGGCCGGACCCAAGTCGCTGCGCATCACCGCGCTCGACGCACAACAGCAGATCAAACTGTTCCTCATTATGGGTTCCCCGGCCGACATAGTTCAGTTGACGAGAGCTATAAAAGCTCGAGTGCAAACGAGCAAGAAGCCGGCGGGCGGCGCGCGCGGCCACATCGCGCCCTCGCAGTCGGCCGCCGCGCGCCTCGACGCCGACGCGGACGACTGCGGCGACCGGCTGGCGGCGGCGCCCGGTGCGCCCGAGTACCAGTCCAACGTCGACGGCATGCGGGACGACAACGAAACCAAACCCCTGAAAAGGAAAGAGCCAGTCGACGACGAAACCTCGCCGAAGAGACAGTGCCCCGAAATAGTAATAGATTGA
Protein
MSVVRVGGGQLAGARARRAAAQRVRRRRGGAAGGGGARLVVRVAGSLRVVLNTKLWPDMLADQAGPKSLRITALDAQQQIKLFLIMGSPADIVQLTRAIKARVQTSKKPAGGARGHIAPSQSAAARLDADADDCGDRLAAAPGAPEYQSNVDGMRDDNETKPLKRKEPVDDETSPKRQCPEIVID

Summary

Pfam
PF00638   Ran_BP1
Interpro
IPR011993   PH-like_dom_sf        + More
IPR000156   Ran_bind_dom       
Gene 3D
PDB
2Y8G     E-value=2.33603e-08,     Score=136

Ontologies

Topology

Length:
185
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.12783
Exp number, first 60 AAs:
0.12049
Total prob of N-in:
0.07884
outside
1  -  185
 
 

Population Genetic Test Statistics

Pi
221.827803
Theta
161.157998
Tajima's D
1.041212
CLR
0
CSRT
0.675366231688416
Interpretation
Uncertain
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