Gene

KWMTBOMO13310  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004672

Annotation

PREDICTED:_ran-binding_protein_3_[Bombyx_mori]

Location

Bomo_Chr22(+):13313551-13316855      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.573

CDS

ATGGAAGACGCAAAGCAAGAAAAAACCCCAGGAGATATGTGCAATGGAACATCACAAACCAGAATGGTATTGGCCAAGCCTCGCTTAGGAGGATTTGGATCACCTAGTTTTAGTTCCACTTCGAATAAAACAAATAATCCTTTTGGTTCAGTGCTACGCCCTCCACAATTGAAAGCGACAACTAATCCATTCCTTAAACCAAACCCAATTGAAGAATCAGGAAAGGAGAAAGACAAAGAAGCTTCTGAAAACAGACTCAATGAATCCAAAGAGAATATCGAGGTGCCACAGTTTGTGCCTTTAGGTGGAGCAAATGTGGCTTCTCGCAATGTAAATGCGGTGCCAGCAACCAACAGCCCAGCCGCACCTAGTTTTGTGTTTGGTCAAAATCTTAGTGAAAGGGTAGTTATTAAAGAAAATGGGAATAATGGTGAAGCCTCCGCGACAGAACATAGCTCTTCAAATGGGACAACTGAATTACTTTTCACAAATGCTGCAGCTTCAGTTAAAGAAAATAATCAGGAATCTGAGTCTAGTAGAGCTGAAACAAGTAATCGTGATGCCTTAGTAGCAGCTGCTGCAGAATACGAAAGATCACATGCACGACCTCTGCCGCCTACTACAAACTGTACAATCACTGGGGAAGAGGACGAAACAAATGTTTTACAGGTTTTAAAACTACTTAATAATAAATTACAGTTTTTATTTATTTATTGA

Protein

MEDAKQEKTPGDMCNGTSQTRMVLAKPRLGGFGSPSFSSTSNKTNNPFGSVLRPPQLKATTNPFLKPNPIEESGKEKDKEASENRLNESKENIEVPQFVPLGGANVASRNVNAVPATNSPAAPSFVFGQNLSERVVIKENGNNGEASATEHSSSNGTTELLFTNAAASVKENNQESESSRAETSNRDALVAAAAEYERSHARPLPPTTNCTITGEEDETNVLQVLKLLNNKLQFLFIY

Uniprot

H9J582   A0A2A4J3R8   A0A2A4JCX5   A0A2H1VNH2   A0A2W1BIE6   A0A194R165   + More
A0A194PYG4   S4PXV6   A0A212F0P3   A0A0L7KUT8   A0A1E1W0N0   K7IMQ3   A0A232EMH3   E9IVR9   E2BCI1   A0A151IKP6   A0A0C9PLH5   A0A0C9RD29   A0A158NVF8   E2A8B0   F4WR22   D6WZG4   A0A195FKW0   A0A1I8NSK9   N6T6I5   U4UF43   A0A2R7WIW9   A0A0M4EH30   A0A146LK58   A0A0K8SM56   A0A0A9WU61   A0A0L0CBF5   W6UWB5   A0A068WNP1   A0A1L8DCN8   A0A1B6E1F6   A0A023EYL4   A0A068Y569   A0A161N051   A0A0P4VIC9  

Pubmed

19121390    28756777    26354079    23622113    22118469    26227816    + More
20075255    28648823    21282665    20798317    21347285    21719571    18362917    19820115    23537049    26823975    25401762    26108605    24013640    23485966    25474469    27129103   

EMBL

BABH01039734    BABH01039735    NWSH01003581    PCG66090.1    NWSH01001847    PCG69935.1    + More
ODYU01003497    SOQ42370.1    KZ150103    PZC73475.1    KQ460883    KPJ11254.1    KQ459586    KPI98063.1    GAIX01004373    JAA88187.1    AGBW02011073    OWR47271.1    JTDY01005613    KOB66831.1    GDQN01010552    JAT80502.1    NNAY01003355    OXU19559.1    GL766384    EFZ15331.1    GL447283    EFN86607.1    KQ977176    KYN05106.1    GBYB01001918    JAG71685.1    GBYB01006190    JAG75957.1    ADTU01027133    GL437526    EFN70323.1    GL888284    EGI63249.1    KQ971372    EFA10423.1    KQ981512    KYN40897.1    APGK01050248    KB741169    ENN73298.1    KB632294    ERL91657.1    KK854897    PTY19582.1    CP012526    ALC47804.1    GDHC01010271    GDHC01003165    JAQ08358.1    JAQ15464.1    GBRD01011940    GBRD01011939    JAG53885.1    GBHO01032300    GBHO01032298    GBHO01032295    JAG11304.1    JAG11306.1    JAG11309.1    JRES01000634    KNC29743.1    APAU02000011    EUB62752.1    LK028579    CDS19271.1    GFDF01009856    JAV04228.1    GEDC01005539    JAS31759.1    GBBI01004500    JAC14212.1    LN902843    CDS37323.1    GEMB01003002    JAS00202.1    GDKW01002983    JAI53612.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000002358    UP000215335    UP000008237    UP000078542    UP000005205    UP000000311    UP000007755    UP000007266    UP000078541    UP000095300    UP000019118    UP000030742    UP000092553    UP000037069    UP000019149    UP000017246   

PRIDE

H9J582   

Pfam

PF00638   Ran_BP1

Interpro

IPR011993   PH-like_dom_sf        + More
IPR000156   Ran_bind_dom       

Gene 3D

2.30.29.30    

ProteinModelPortal

H9J582   A0A2A4J3R8   A0A2A4JCX5   A0A2H1VNH2   A0A2W1BIE6   A0A194R165   + More
A0A194PYG4   S4PXV6   A0A212F0P3   A0A0L7KUT8   A0A1E1W0N0   K7IMQ3   A0A232EMH3   E9IVR9   E2BCI1   A0A151IKP6   A0A0C9PLH5   A0A0C9RD29   A0A158NVF8   E2A8B0   F4WR22   D6WZG4   A0A195FKW0   A0A1I8NSK9   N6T6I5   U4UF43   A0A2R7WIW9   A0A0M4EH30   A0A146LK58   A0A0K8SM56   A0A0A9WU61   A0A0L0CBF5   W6UWB5   A0A068WNP1   A0A1L8DCN8   A0A1B6E1F6   A0A023EYL4   A0A068Y569   A0A161N051   A0A0P4VIC9  

KEGG

101745286    K15304 Ran-binding protein 3 | (RefSeq) ran-binding protein 3

GO

GO:0046907   GO:0005623   GO:0005737   GO:0008536   GO:0005634   GO:0006611   GO:0005643   GO:0043547   GO:0016021  

Length:

238

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00061

Exp number, first 60 AAs:

0.00021

Total prob of N-in:

0.14048

outside

1  -  238

 

 

Pi

139.147528

Theta

139.798272

Tajima's D

-0.437324

CLR

37.270559

CSRT

0.256637168141593

Interpretation

Uncertain