Gene

KWMTBOMO13298

Annotation

Golgi-associated_PDZ_and_coiled-coil_motif-containing_protein_[Operophtera_brumata]

Location

Bomo_Chr22(-):13074864-13077730      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.191

CDS

ATGGCGACCACCGGAGTAGGTTTTCGGTGGTTAGATATTTTAGAAAAGGAATTTGATAAAGCGTGTGTCGAATTGGACACTTCTTTGGTAGAGTTGGAAGCAGAAGAGCCAGAAGTCGTATTTGGAGCTCGGCAGAAGATAGCCACACTCAGTTCATGTTTCGCACAACTTACACATAAGGCATTGACTATTTTCCAGAATAGTGCAAAATTAGAGACAGTTGAACCTCGTGTTATATGGTTACCGAAGTGCAAAGACATCGCATTACATGAATGCTGCTACCCACCTTGA

Protein

MATTGVGFRWLDILEKEFDKACVELDTSLVELEAEEPEVVFGARQKIATLSSCFAQLTHKALTIFQNSAKLETVEPRVIWLPKCKDIALHECCYPP

Uniprot

A0A194PYB0   A0A194R1Y8   A0A1E1WVH6   A0A2H1VC42   A0A0L7LSS4   A0A212F0H5   + More
A0A2P8YAL3   A0A2R7WC85   A0A067R1G7   T1HUD3   A0A0A9Y0D5   N6URY4   A0A2J7R714   A0A1B6HQS8   A0A069DUU0   A0A1B6KFT8   E0W359   A0A2Y9D446   T1IY45   A0A3R7SPX9   R7V1V3   A0A226PAQ1   A7RPA4   A0A0B6XZ80   Q6PHG0   C3ZNT3   V4B1A2   A0A2T7P6I9   A0A1S3HET2   A0A3M6UXT6   A0A2B4SFR3   A0A2C9JKB0   A0A0B7BRL7   K1R1H6   A0A210QUR0   T1KJW2   Q7ZV28   A0A3Q1JWH0   A0A060VRK0   A0A1S3M9M3   A0A1S3S8F3   A0A3Q1IDY9   A0A1S3MA91   A0A1S3S8E7   A0A3Q1IQ07   A0A023GLC3   A0A0S7JQW8   A0A224Z654   A0A131YKB1   L7M8P5  

Pubmed

26354079    26227816    22118469    29403074    24845553    25401762    + More
26823975    23537049    26334808    20566863    23254933    24621616    17615350    23594743    18563158    30382153    15562597    22992520    28812685    24755649    28797301    26830274    25576852   

EMBL

KQ459586    KPI98013.1    KQ460883    KPJ11265.1    GDQN01000029    JAT91025.1    + More
ODYU01001764    SOQ38418.1    JTDY01000159    KOB78523.1    AGBW02011073    OWR47258.1    PYGN01000754    PSN41281.1    KK854531    PTY16620.1    KK852994    KDR12723.1    ACPB03025161    ACPB03025162    ACPB03025163    ACPB03025164    ACPB03025165    GBHO01019031    GDHC01001983    JAG24573.1    JAQ16646.1    APGK01018839    APGK01018840    KB740085    KB631844    ENN81492.1    ERL86667.1    NEVH01006738    PNF36627.1    GECU01030705    JAS77001.1    GBGD01001184    JAC87705.1    GEBQ01029657    JAT10320.1    DS235882    EEB20065.1    AAZO01007334    JH431669    QCYY01002454    ROT70188.1    AMQN01006323    KB298084    ELU09651.1    AWGT02000121    OXB76497.1    DS469525    EDO46649.1    HACG01002308    CEK49173.1    CU138502    BC056565    AAH56565.1    GG666653    EEN45815.1    KB199905    ESP04073.1    PZQS01000006    PVD29006.1    RCHS01000500    RMX58482.1    LSMT01000078    PFX28711.1    HACG01047950    CEK94815.1    JH817539    EKC35000.1    NEDP02001786    OWF52461.1    CAEY01000169    BC046027    AAH46027.1    FR904287    CDQ57441.1    GBBM01001515    JAC33903.1    GBYX01234083    JAO66778.1    GFPF01010636    MAA21782.1    GEDV01010051    JAP78506.1    GACK01005550    JAA59484.1   

Proteomes

UP000053268    UP000053240    UP000037510    UP000007151    UP000245037    UP000027135    + More
UP000015103    UP000019118    UP000030742    UP000235965    UP000009046    UP000283509    UP000014760    UP000198419    UP000001593    UP000000437    UP000001554    UP000030746    UP000245119    UP000085678    UP000275408    UP000225706    UP000076420    UP000005408    UP000242188    UP000015104    UP000265040    UP000193380    UP000087266   

Pfam

PF00595   PDZ

Interpro

IPR038879   GOPC        + More
IPR001478   PDZ       
IPR036034   PDZ_sf       

SUPFAM

SSF50156   SSF50156       

ProteinModelPortal

A0A194PYB0   A0A194R1Y8   A0A1E1WVH6   A0A2H1VC42   A0A0L7LSS4   A0A212F0H5   + More
A0A2P8YAL3   A0A2R7WC85   A0A067R1G7   T1HUD3   A0A0A9Y0D5   N6URY4   A0A2J7R714   A0A1B6HQS8   A0A069DUU0   A0A1B6KFT8   E0W359   A0A2Y9D446   T1IY45   A0A3R7SPX9   R7V1V3   A0A226PAQ1   A7RPA4   A0A0B6XZ80   Q6PHG0   C3ZNT3   V4B1A2   A0A2T7P6I9   A0A1S3HET2   A0A3M6UXT6   A0A2B4SFR3   A0A2C9JKB0   A0A0B7BRL7   K1R1H6   A0A210QUR0   T1KJW2   Q7ZV28   A0A3Q1JWH0   A0A060VRK0   A0A1S3M9M3   A0A1S3S8F3   A0A3Q1IDY9   A0A1S3MA91   A0A1S3S8E7   A0A3Q1IQ07   A0A023GLC3   A0A0S7JQW8   A0A224Z654   A0A131YKB1   L7M8P5  

KEGG

101738845    no KO assigned | (RefSeq) golgi-associated PDZ and coiled-coil motif-containing protein-like

GO

GO:0005794   GO:0043004   GO:0016021  

PANTHER

PTHR16528  

Length:

96

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00121

Exp number, first 60 AAs:

0.00082

Total prob of N-in:

0.25211

outside

1  -  96

 

 

Pi

48.856266

Theta

155.182045

Tajima's D

-1.162037

CLR

1117.618557

CSRT

0.113644317784111

Interpretation

Uncertain