Silkworm Genome Informatics Database

Gene

KWMTBOMO13297

Pre Gene Modal

BGIBMGA004693

Annotation

PREDICTED:_uncharacterized_protein_LOC106100155_[Papilio_polytes]

Location

Bomo_Chr22(+):13053141-13072308 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.691

CDS

ATGTTAAGTGTGGCTGGGGCGGTGCTGGCGTGCCTTTGTTTGGCGCGCACCTCACCGGCCGAGCCTTACAATCTTCGTGTCTACTCACCAAATACGCACAGCTCTACGGATACAAATAGCATTCTAGCCAGCATTGAAGAGCGGTTGCGTGTTCTAGAAACAGTTAGCGCGGTACAAGCCAAACAAACTCGCCGCCTGGACGCGATTCAGGATAAATTAGATCGTGTCGAGACTACTCTGTCTTTGAAATTAGAAAGAGTACAACTAGCAGCGGAGAGATTGGAACATAGACTTCACATGTTTCAAGTCAATATACAGACTACAGTCAAAGAAAACACGCAGAAATTAGAACGAAGTCAAACAAATTTAGTGGCACAACTCGCTCAGAACTTGACGAGCCACATTGACACGCACAAACATTTATTGGAGAAGGCTAACGGTGCTTACGCAGAGACTTGGCACAGAGGTCTTGTGTTAGAATCTTTAATGCGCGACGGACTGTCACTAGTGAATGTTACCAGAAGGGAATTAGCTGATGGACTACGAACTTTGGCGAGGAGGCAACGAGACGCTAGGCTCACCTCAGCTGACATTGAAGCTAACTTCGCCCGAAGGATCAATGAAAACACTTATAAAATCGATCTAAAGATGAAGGAAGTTTTAGAAATCCAAAAGCGTTTCATGAATTCCTGTGAGAGAATACAACTCGATGGACCGACCCAAGTAGCAGATGTGCTGGATAAATTAATAGATTCACTCATCAACAAGACTGCAGCAACATTCCACGAATTACAGAATATTCAAGTGACGATGCGTAATCATGACAATAGGGTAATGAAACTGCTTGGTACAATGCGAGTACCACAGAACGATCCAGCGTGTCGGAGATTAGAAACAGCTTTCCGTAATACATCTCACACGGTCCTTAGAGAGAACGAATTGAAACAATTGACGGAAAAGTTCGTAGCGTTGACGGATCGGGCCGACGCAGCTTTGCAAAGGCTTGAAGCACAGTTATCGGACAGCTTAGACGAACCGGTGCCCTCCTCCGAAGTCACAGCTGAAGCTGACAGACTTCTACTTAAATTGAAGGGATTAAGAGACGGCGATTCAAGCGAATTCGATTGGGAGGATGATGCTGGTTATTTCGACGACGGCGGTGGAGGCGACATCATGGAAGAGGACAAGCTCGTCCTCAGTAAGGCATCAAATACGAAAAAGAGGGCAACGGAAAGCGCTTCAGTGCGCCACCTACATCGGAGACATCTTCACAAACATCCATTTGATCGTGGCCCCAACTCGAAGGATCCTTCTTTAACATAA

Protein

MLSVAGAVLACLCLARTSPAEPYNLRVYSPNTHSSTDTNSILASIEERLRVLETVSAVQAKQTRRLDAIQDKLDRVETTLSLKLERVQLAAERLEHRLHMFQVNIQTTVKENTQKLERSQTNLVAQLAQNLTSHIDTHKHLLEKANGAYAETWHRGLVLESLMRDGLSLVNVTRRELADGLRTLARRQRDARLTSADIEANFARRINENTYKIDLKMKEVLEIQKRFMNSCERIQLDGPTQVADVLDKLIDSLINKTAATFHELQNIQVTMRNHDNRVMKLLGTMRVPQNDPACRRLETAFRNTSHTVLRENELKQLTEKFVALTDRADAALQRLEAQLSDSLDEPVPSSEVTAEADRLLLKLKGLRDGDSSEFDWEDDAGYFDDGGGGDIMEEDKLVLSKASNTKKRATESASVRHLHRRHLHKHPFDRGPNSKDPSLT

Uniprot

H9J5A3 A0A194R5X2 A0A194PXG0 I4DPJ0 A0A212F0L6 A0A2H1VC63 + More
A0A0L7LT27 A0A1S4N2F5 E0W360 C1P640

Pubmed

19121390 26354079 22651552 22118469 26227816 20566863 + More
9851916

EMBL

BABH01037024 KQ460883 KPJ11266.1 KQ459586 KPI98012.1 AK403631 + More
BAM19830.1 AGBW02011073 OWR47257.1 ODYU01001764 SOQ38417.1 JTDY01000159 KOB78529.1 AAZO01007334 DS235882 EEB20066.1 BX284604 CAX65067.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000007151 UP000037510 UP000009046 + More
UP000001940

PRIDE

H9J5A3

Pfam

PF00053   Laminin_EGF        + More
PF02210   Laminin_G_2
PF06009   Laminin_II
PF00052   Laminin_B
PF00055   Laminin_N
PF00054   Laminin_G_1

Interpro

IPR038684   Laminin_N_sf        + More
IPR013320   ConA-like_dom_sf
IPR002049   Laminin_EGF
IPR000034   Laminin_IV
IPR013032   EGF-like_CS
IPR008211   Laminin_N
IPR008979   Galactose-bd-like_sf
IPR001791   Laminin_G
IPR000742   EGF-like_dom
IPR010307   Laminin_dom_II

SUPFAM

SSF49785 SSF49785 + More
SSF49899 SSF49899

Gene 3D

2.60.120.1490 2.60.120.260

ProteinModelPortal

H9J5A3 A0A194R5X2 A0A194PXG0 I4DPJ0 A0A212F0L6 A0A2H1VC63 + More
A0A0L7LT27 A0A1S4N2F5 E0W360 C1P640

KEGG

101738706 no KO assigned | (RefSeq) uncharacterized LOC101738706

GO

GO:0000003 GO:0071711 GO:0009408 GO:0040017 GO:0007155 GO:0042127 GO:0051788 GO:0016477 GO:0010950 GO:0001764 GO:0005604 GO:0007414

SignalP

Position: 1 - 19, Likelihood: 0.847089

Length:

440

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02158

Exp number, first 60 AAs:

0.02158

Total prob of N-in:

0.00226

outside

1 - 440

Pi

203.675489

Theta

176.326

Tajima's D

0.038532

CLR

100.317469

CSRT

0.383380830958452

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics