SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13295  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004706
Annotation
PREDICTED:_SH3_domain-binding_glutamic_acid-rich_protein_homolog_isoform_X1_[Papilio_polytes]
Location in the cell
Nuclear   Reliability : 2.465
 

Sequence

CDS
ATGGTTGTCAAAATTTATATCAGTGGCATTTCTGGCAACAAGGAGGTGAAGAAACGTCAGCAGCGGGTCCTGATGATTTTAGACTCAAAAAATATAAAATATGAAGTCATCGACATAACGGAACCAGGGAGAGAGTCCGATAAAGATTTCATGCAAAACAATGCTAAATCTTCTGGTGGCACCGTCAGTGACCCGAACCCGCGTTCACCACTGCCGCCGCAGATGTTTAACGATGAAGAATATTGTGGGGATTATGATCAGTTTGATTTAGCCAATGAAGTTGATACTCTTGAGCAGTTTCTAAAGTTGGAGGCACCTCCAGAAGAACCACCTCAAGAAACAGAAAAGGAAAGTACCTTAAATGGTGATCTTGATGGAGAAATAGCTGAAGAAACCTCCCAAGAAACAGAAACTACAGCGGAAAAAGCAGAAAATGATGAAGCAGACACCATTGAAACATCTGAAAAAGTAAAGGAGACTAGTCCTGTTAAAGAAAACTCACCAATTAAAGAAATTGAAGAAACTACAAAAGAAGCTACACCTGTTCCTGTAGATAATGAAGTGCAGGAAGATGTTGCTAAACAAGGTTCACCCGAGAAGGAAGCCTCACCAGATCTACAAAATTTGGTTGGAGATGAAGCAAAAGAAAAATCTCCAGTAAAAGAGACTGACGATGAGCCAAAAGAGATATCAAAAGAAAGTTCTCCAGAAAAAGAGGGACCAGTGAATGAAAATGGCACCGTGAGCTCGCGTGAACAGTCTGAAGGGAAGGATGTTGAAGTGACTGAAGCAATAGATAAAACAATAGACAATCCCTCAGACCTACTGATCGAAAGTGAGCAGGCTGCATCTGCTGAATAA
Protein
MVVKIYISGISGNKEVKKRQQRVLMILDSKNIKYEVIDITEPGRESDKDFMQNNAKSSGGTVSDPNPRSPLPPQMFNDEEYCGDYDQFDLANEVDTLEQFLKLEAPPEEPPQETEKESTLNGDLDGEIAEETSQETETTAEKAENDEADTIETSEKVKETSPVKENSPIKEIEETTKEATPVPVDNEVQEDVAKQGSPEKEASPDLQNLVGDEAKEKSPVKETDDEPKEISKESSPEKEGPVNENGTVSSREQSEGKDVEVTEAIDKTIDNPSDLLIESEQAASAE

Summary

Pfam
PF04908   SH3BGR
Interpro
IPR006993   Glut_rich_SH3-bd        + More
IPR036249   Thioredoxin-like_sf       
SUPFAM
SSF52833   SSF52833       
PDB
2CT6     E-value=2.45434e-11,     Score=164

Ontologies

GO

Topology

Length:
286
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02809
outside
1  -  286
 
 

Population Genetic Test Statistics

Pi
66.581025
Theta
114.208387
Tajima's D
-0.961137
CLR
162.87808
CSRT
0.144292785360732
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 YEVIDITEPGR 100.00 5e-04
26280517 EASEYEPYEPDR 100.00 5e-04
25044914 EATIQVCQDR 100.00 5e-04
28467696 EATFEIKPYK 100.00 5e-04
28556443 IYISGISGNK 100.00 5e-04
28556443 AENDEADTIETSEK 100.00 0.001
26822097 IYISGISGNK 100.00 0.001
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