Silkworm Genome Informatics Database

Gene

KWMTBOMO13289

Pre Gene Modal

BGIBMGA004690

Annotation

PREDICTED:_importin-13_[Bombyx_mori]

Location

Bomo_Chr22(+):12920441-12933495 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 1.915

CDS

ATGTCTCAAGATGGGTGGAACGACGCTGTGAGCGACAGTTCGCTGGAGGCTTGCGAGGCCAGCCTGGCGGCGCTGCGGGAGGCGGGCGGCGCGCGGCACCGCCACACCGCGCTGCAACTCCTCGCCGACCTCGCCGCACTCACCGCGCCCATCATGCGCAAGGACGACGTGCCCAACTCCATCAACGAGGAACTGTTATTAGCGTTGATAACGTGCTGCGTCGCGTTAGGCGAGACCCACGCCAAGGCTCTGGTGGAGGTGACGGAAACCAACGATGCTTCGGAGAACGCGTGCGGCGCGCGACAACTCCTGGATATCCTGCTGGCGGCGCAGGCGGCACCTGGACACTATCCCGTACACGAGACCAGGTCTAACCTTGTATTTGGATTCTGGTATACGTTACAGGACGAAGTACTCCACATTATAGATGACACGAAGGTGATTCATCCGGTCTGGAAGGAAGTTTTCTCGCGTCTCCTGCTGGCCCTGGTCACCAAGTCCGAAGCTGCTCCGGAAAATAATTTATCTAAAGACGACCTTGAACTGCTCAGGTGTTATCGGCAGGATATCGCTGATACTGTGATGTACTGTTTCGCTATACTCGGCGACTGGTGCTGGAGCACTGTGGAGAGCGCGTTCAACTCGGCCGAGACGGATTCACGTCGCGAAGCCGCCCTGCACATATTCCTGTCGTTGGCGGACGCCGCGCCCTACGAACGGGCCCCCGACGCCCTGTTCAACATGCTGGAACATGCCGTCAACATCGCCAACACTTCGACCGACAATAGGATGTTAAACACCGCTTTGGACTGTCTCGGCGGGTACGCGTCGTGGCTGAGTTCGGTGTCGGGACAGGAGCGCTGTGCAGCCCTGGGGCTCTCCAGCGTGATGGCCGCCGGCGCCGCCCTCCAGCGGTGCGTGGCCCCCGCCGCCCTCGCCCTGCGCAAGCTGTGCGCCGACTGCAGCGCGCCCGCGGCCGACCTCGCGCCCGACATAGTGCACGCCGCGCGGAGCACAGGTGGCCGTAGCGACGGCTGGGTGCGGCGCCAGCTGTGCGGCGCTGCGGGCGCGGCGCTAGCGGCAGCGCCGCCTCTACTGGCTGCACCGCTGTTGGAAGATCTCGCACGCACGCTCCGGGATGACATCGCTATGCAAAGACGCGACGTGAACCTGACGTGCTGCGCGGCGGAGTGCGCGGCCGTGGTGATGGCGGCGCTGGCCCCCAGCCCCGCGCTTGCCGCCCAACTGTTCCGCATCATCGCCCCCACCCTGCCGCCGCTCGCTCAACACGAAGCTCTCGTCGAATATTTATTCACGATACTAAAGCAGACGGTGTCAGCTCTAATGGAAGAGTGCGTGCCGCTGGTCGCCGAAATAGCGGAGCTGCTGATGACTGGCTTCACTAACTTCAGTTGCGCTCCGGGACTGGACATAGTGAAACTGATGGTGTTGGTCGTGGGCGAGTGGTCGGGCTCGGCGGCGCTGGTGAGCAGCGTGGTGGCGACCAGCGTGCAAGAGCTGGCGCCGCAGCCCGCCGCCAGGCCAGACCTCTCCGACGGACTCTTCGCTATGTTGATGGCCCTCACTAAGAAGAAACCAGAAGTCCTCAACTGGATCGAACATTTGCTCCCTGAACTGGTCGACCTAGGCGGGAATTCAATCCGCGTGTGGGCGCCGGGCGCGGTGCGGTCGGTGTGCGGCTGGCTGTCGGCGCTCTGTGTCGCGCGCCCGCGGGCTGCGCATGCGCGCGGAGCCGCCCTCACGCACGCCCTGCTGATCTGTATCGGCGGCGTGATGCCTCGCAACCAAGTGATGCCCGTCTCAGACCTGCTGCTGTCAATGAACCGTGCGGATTGGGGGGAGGAGGAAGAAAAGCTGGAGACGTGGCTGCGAACCTCACTGGCGCCCTCGGATTTCCCCACGCCACACGCCACACACGCACACAAACAGAAATTCATAGCCGGCGTGCTCAGGGAACGAACCAGTAAGCGCAGGATACTCGAAGTGGTGCAGGAGTTCTCGCTGGCGTGTCGAGGACTCATCGGCACCGAGTACTCGCGGCAGGCGATCGCCTCCAGAAGTCTAGTCTCTTAA

Protein

MSQDGWNDAVSDSSLEACEASLAALREAGGARHRHTALQLLADLAALTAPIMRKDDVPNSINEELLLALITCCVALGETHAKALVEVTETNDASENACGARQLLDILLAAQAAPGHYPVHETRSNLVFGFWYTLQDEVLHIIDDTKVIHPVWKEVFSRLLLALVTKSEAAPENNLSKDDLELLRCYRQDIADTVMYCFAILGDWCWSTVESAFNSAETDSRREAALHIFLSLADAAPYERAPDALFNMLEHAVNIANTSTDNRMLNTALDCLGGYASWLSSVSGQERCAALGLSSVMAAGAALQRCVAPAALALRKLCADCSAPAADLAPDIVHAARSTGGRSDGWVRRQLCGAAGAALAAAPPLLAAPLLEDLARTLRDDIAMQRRDVNLTCCAAECAAVVMAALAPSPALAAQLFRIIAPTLPPLAQHEALVEYLFTILKQTVSALMEECVPLVAEIAELLMTGFTNFSCAPGLDIVKLMVLVVGEWSGSAALVSSVVATSVQELAPQPAARPDLSDGLFAMLMALTKKKPEVLNWIEHLLPELVDLGGNSIRVWAPGAVRSVCGWLSALCVARPRAAHARGAALTHALLICIGGVMPRNQVMPVSDLLLSMNRADWGEEEEKLETWLRTSLAPSDFPTPHATHAHKQKFIAGVLRERTSKRRILEVVQEFSLACRGLIGTEYSRQAIASRSLVS

Uniprot

H9J5A0 A0A3S2M6V1 A0A2A4J193 A0A2H1VL34 A0A194PXD3 A0A194R184 + More
A0A2A4J0Y1 A0A2A4IZJ3 A0A1W4XE14 A0A1W4XPD4 A0A069DXQ1 A0A023EZU5

Pubmed

19121390 26354079 26334808 25474469

EMBL

BABH01037042 RSAL01000018 RVE52811.1 NWSH01004365 PCG65182.1 ODYU01003145 + More
SOQ41528.1 KQ459586 KPI98006.1 KQ460883 KPJ11274.1 PCG65184.1 PCG65181.1 GBGD01000407 JAC88482.1 GBBI01004698 JAC14014.1

Proteomes

UP000005204 UP000283053 UP000218220 UP000053268 UP000053240 UP000192223 + More

PRIDE

H9J5A0

Pfam

PF18773   Importin_rep        + More
PF03810   IBN_N
PF08389   Xpo1
PF18806   Importin_rep_3

Interpro

IPR040709   Importin_rep_1        + More
IPR016024   ARM-type_fold
IPR011989   ARM-like
IPR001494   Importin-beta_N
IPR013598   Exportin-1/Importin-b-like
IPR040520   Importin_rep_3

SUPFAM

SSF48371 SSF48371

Gene 3D

1.25.10.10

ProteinModelPortal

H9J5A0 A0A3S2M6V1 A0A2A4J193 A0A2H1VL34 A0A194PXD3 A0A194R184 + More
A0A2A4J0Y1 A0A2A4IZJ3 A0A1W4XE14 A0A1W4XPD4 A0A069DXQ1 A0A023EZU5

PDB

3ZKV E-value=1.64371e-26, Score=299

KEGG

101741155 no KO assigned | (RefSeq) importin-13

GO

GO:0005634 GO:0008536 GO:0006886 GO:0005488 GO:0020037 GO:0006397 GO:0005737 GO:0048869 GO:0003676 GO:0016491 GO:0015930

Subcellular location

Nucleus

Length:

697

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.656489999999998

Exp number, first 60 AAs:

0.003

Total prob of N-in:

0.01043

outside

1 - 697

Pi

285.954125

Theta

179.491376

Tajima's D

1.990414

CLR

0.804217

CSRT

0.88245587720614

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics