SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13280
Pre Gene Modal
BGIBMGA004714
Annotation
PREDICTED:_probable_cytochrome_P450_313a2_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.328 Mitochondrial   Reliability : 1.354
 

Sequence

CDS
ATGGTAGCATCTGGTAACGTTTTGCCTGCCGGTTCAGGAATAGTGGTTTCTATCTGGGGAATACATAGAGACCCAAAGTACTGGGGTCCAGAGGCGGAACACTTCGATCCAGACAGGTTTCTACCGGAGCGTTTTAATGTCGAGCACCCGTGCTGCTACATGCCGTTCAGTAGCGGCCCTAGGAATTGTTTGGGTTATCAATATGCAATGATTTCGATGAAGGCTTCTTTATCTGCGATATTACGTAGATACAAGGTAGTGGGTGAACCGGAGAAAGGTCCTGTTCCTCGAATCAGGGTAAAAGTGGACATCATGATGAAGTCAGTGGACGGATGCCAGGTGGCTTTGGAGAGAAGGCCGACCAAATTATAA
Protein
MVASGNVLPAGSGIVVSIWGIHRDPKYWGPEAEHFDPDRFLPERFNVEHPCCYMPFSSGPRNCLGYQYAMISMKASLSAILRRYKVVGEPEKGPVPRIRVKVDIMMKSVDGCQVALERRPTKL

Summary

Cofactor
heme
Similarity
Belongs to the cytochrome P450 family.
EMBL
BABH01037058    BABH01037059    BABH01037052    BABH01037064    BABH01037065    BABH01037061    + More
JTDY01004128    KOB68554.1    JTDY01002945    KOB70438.1    JTDY01007290    KOB65321.1    KOB70439.1    KQ459586    KPI98000.1    KQ460883    KPJ11283.1    NWSH01005164    PCG64388.1    KPJ11285.1    AB201381    BAD99563.1    GCVX01000086    JAI18144.1    KY212088    ARA91652.1    KPJ11284.1    AGBW02008898    OWR52238.1    KX443470    ASO98045.1    KPI97998.1    KC789756    AGO62011.1    KPI97999.1    JX310094    AFP20605.1    KP001145    AJN91190.1    RBVL01000320    RKO09374.1    AGBW02015005    OWR40717.1    KPJ11286.1    KF701170    AHW57340.1    KY212090    ARA91654.1    RSAL01000018    RVE52820.1    JTDY01011574    KOB55455.1    KY212089    ARA91653.1    RVE52821.1    KX425016    ASN63843.1    KF701175    AHW57345.1    ODYU01003376    SOQ42054.1    RSAL01000100    RVE47555.1    JTDY01006414    KOB66031.1    KM016717    AID54869.1    JTDY01007865    KOB64900.1    NWSH01001465    PCG71165.1    GDQN01000461    JAT90593.1    PCG71164.1    NWSH01007729    PCG62839.1    KX609528    ARN17935.1    KQ460323    KPJ15874.1    GCVX01000088    JAI18142.1    PCG71161.1    ODYU01011123    SOQ56666.1    KX443471    ASO98046.1    KM016716    AID54868.1    DS232542    EDS43223.1    CH900366    EAT32374.1    KPI98134.1    DS232782    EDS45650.1    KQ971326    KYB28487.1    SOQ56667.1    CH477795    EAT36132.2    JXUM01004862    KQ560183    KXJ83957.1    AB795798    BAQ56325.1    JXUM01007647    KQ560244    KXJ83621.1    KZ149894    PZC78854.1    KM016722    AID54874.1    KPI98133.1    NEVH01009068    PNF34044.1    CH477923    EAT35036.2    NWSH01000444    PCG76362.1    SOQ42053.1    GFDF01000662    JAV13422.1    LC326250    BBA58211.1    KQ971344    EFA05708.1    PNF34049.1    GBYB01007184    GBYB01007185    JAG76951.1    JAG76952.1    EAT35039.1    KK852542    KDR21746.1    EAT36133.1    ODYU01000688    SOQ35886.1    AXCN02001559    EAT35033.2    AXCP01008626    AXCP01008627    GCVX01000087    JAI18143.1    EDS45649.1    JXUM01004863    JXUM01004864    JXUM01004865    KXJ83958.1    EDS45648.1    ATLV01024976    KE525366    KFB52027.1    KQ971379    EEZ97716.1    BABH01012758   
Pfam
PF00067   p450
Interpro
IPR002403   Cyt_P450_E_grp-IV        + More
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR036396   Cyt_P450_sf       
IPR002401   Cyt_P450_E_grp-I       
IPR002402   Cyt_P450_E_grp-II       
IPR001878   Znf_CCHC       
SUPFAM
SSF48264   SSF48264       
Gene 3D
PDB
6C94     E-value=3.54494e-17,     Score=209

Ontologies

Topology

Length:
123
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.375
Exp number, first 60 AAs:
1.18909
Total prob of N-in:
0.13250
outside
1  -  123
 
 

Population Genetic Test Statistics

Pi
158.848758
Theta
124.665791
Tajima's D
0.861034
CLR
0.519644
CSRT
0.622718864056797
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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