SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13279
Pre Gene Modal
BGIBMGA004717
Annotation
PREDICTED:_cytochrome_P450_4c21-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.047 Mitochondrial   Reliability : 1.308
 

Sequence

CDS
ATGTTTGTAAGTGGCTATACATCCGGTAACGTTTTGCCTGCCGGTTCAGGGATAATGGTTTCTATTTGGGGAATTCACAGAGACCCAAAGTACTGGGGTCCGGAGGCGGAACACTTCGATCCAGACAGGTTTCTGCCGGAGCGTTTTAATCTCGAGCACCCATGCTGCTACATGCCGTTCAGTAGCGGCCCTAGGAACTGTCTGGGTTATCAGTACGCAATGATATCGATTAAAACTTCTTTATCTGCAATACTGCGGAGATACAAGGTAGTAGGTGAACCGGAGAAAGGTCCTGTTCCTCAAATCAGGGTCAAACTGGATATCATGATGAAGTCAGTGAACGGATGCCAGGTGGCTTTGGAGAGAAGGCCAACAAAATAG
Protein
MFVSGYTSGNVLPAGSGIMVSIWGIHRDPKYWGPEAEHFDPDRFLPERFNLEHPCCYMPFSSGPRNCLGYQYAMISIKTSLSAILRRYKVVGEPEKGPVPQIRVKLDIMMKSVNGCQVALERRPTK

Summary

Cofactor
heme
Similarity
Belongs to the cytochrome P450 family.
EMBL
BABH01037061    BABH01037064    BABH01037065    BABH01037058    BABH01037059    BABH01037052    + More
JTDY01004128    KOB68554.1    JTDY01007290    KOB65321.1    JTDY01002945    KOB70438.1    KOB70439.1    KQ459586    KPI98000.1    KQ460883    KPJ11283.1    NWSH01005164    PCG64388.1    GCVX01000086    JAI18144.1    KPJ11285.1    KX443470    ASO98045.1    KC789756    AGO62011.1    JX310094    AFP20605.1    AGBW02008898    OWR52238.1    KY212088    ARA91652.1    KPI97999.1    KPJ11284.1    RBVL01000320    RKO09374.1    KP001145    AJN91190.1    AB201381    BAD99563.1    AGBW02015005    OWR40717.1    KPI97998.1    KPJ11286.1    KY212090    ARA91654.1    KF701170    AHW57340.1    RSAL01000018    RVE52820.1    JTDY01011574    KOB55455.1    KY212089    ARA91653.1    RVE52821.1    KX425016    ASN63843.1    KF701175    AHW57345.1    JTDY01006414    KOB66031.1    RSAL01000100    RVE47555.1    ODYU01003376    SOQ42054.1    NWSH01001465    PCG71164.1    KM016717    AID54869.1    GCVX01000088    JAI18142.1    NWSH01007729    PCG62839.1    JTDY01007865    KOB64900.1    PCG71161.1    PCG71165.1    GDQN01000461    JAT90593.1    KQ460323    KPJ15874.1    KX443471    ASO98046.1    KM016716    AID54868.1    JXUM01004862    KQ560183    KXJ83957.1    ODYU01011123    SOQ56666.1    KQ971344    EFA05708.1    CH477795    EAT36132.2    KPI98134.1    DS232782    EDS45649.1    CH900366    EAT32374.1    EDS45648.1    DS232542    EDS43223.1    EDS45650.1    GFDF01000662    JAV13422.1    JXUM01007647    KQ560244    KXJ83621.1    KYB27142.1    EAT36133.1    AXCN02001559    KPI98133.1    AB795798    BAQ56325.1    SOQ56667.1    KX609528    ARN17935.1    CH477923    EAT35039.1    SOQ42053.1    LC326250    BBA58211.1    AXCP01008626    GL451328    EFN79463.1    EDS43226.1    NWSH01000444    PCG76362.1    KM016722    AID54874.1    JXUM01004863    JXUM01004864    JXUM01004865    KXJ83958.1    KF979121    AHL26982.1    DQ279461    ABB86762.2    GCVX01000087    JAI18143.1    GBYB01007184    GBYB01007185    JAG76951.1    JAG76952.1    EAT35036.2    KQ971326    KYB28487.1    EAT35033.2    NEVH01009068    PNF34049.1    ATLV01024976    KE525366    KFB52025.1    GCVX01000053    JAI18177.1    KQ971379    EEZ97716.1   
Pfam
PF00067   p450
Interpro
IPR017972   Cyt_P450_CS        + More
IPR001128   Cyt_P450       
IPR002401   Cyt_P450_E_grp-I       
IPR036396   Cyt_P450_sf       
IPR002403   Cyt_P450_E_grp-IV       
IPR002402   Cyt_P450_E_grp-II       
IPR001878   Znf_CCHC       
SUPFAM
SSF48264   SSF48264       
Gene 3D
PDB
6C94     E-value=1.0824e-17,     Score=213

Ontologies

Topology

Length:
126
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.4035
Exp number, first 60 AAs:
3.11685
Total prob of N-in:
0.21467
outside
1  -  126
 
 

Population Genetic Test Statistics

Pi
37.794544
Theta
39.528911
Tajima's D
-0.400402
CLR
0
CSRT
0.267586620668967
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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