Silkworm Genome Informatics Database

Gene

KWMTBOMO13272

Pre Gene Modal

BGIBMGA004723

Annotation

hypothetical_protein_KGM_04463_[Danaus_plexippus]

Location

Bomo_Chr22(-):12573382-12588926 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.196 Nuclear Reliability : 1.328

CDS

ATGACCTCTATGCCTCCTTGCTATCATCTACCACTTGAGTATGCTAAGCTGGTTTCCGAATGCTCGAGACTTCGTCGAGATGAAGGTGTTGCTGGGTCCAGCGTTGTTTGGATCTTCAAGCCGGTGGCGCAGAGTCAAGGCAGAGGAATATTCCTGTTTCGGAGCGTTTGCGAGATGAGCTGTGGTACGGCGGCGGTGGTGCAGCGATATATCGAACGGCCATTATTGATCGCCGGGTACAAGTTCGATCTCAGACTGTACGTGTGCGTGCCCAGTTACAGACCGCTTACAGCGTACCTATATGCCGAAGGACTCGCTAGATTTGGAACGGATAAATACACATTATCAGATATTCACAATCCGTATAGGCATCTAACGAATTCGTCATTGAATAAAACCGGACCTCGCTTCGCCGAATGTAAAGATAGGATTGGCAACGGTTGTAAATGGACATTAAAGCAAGTACGAAGAGCATTAATAGGACGATGGGGTGCCGCAGAATGGTTGGTTTGGCAGAGGATACGAGCGCTGGTGACCCTCACGCTATTAGCGCAGGCGGCTGGTACTCCTCCAGCTAGGAACTGCTTCGAGTTCTATGGATTCGATGTCCTGCTTGACGACAGCTTGAAGCCTTGGCTCTTGGAGGTCAATCTTTCACCCGCACTCGGTACCAACTGTGAAGCAGATATAATCGTGAAACAGCCGATGTTACACGAACTGTTTGATCTTCTTGGTTTGCCCATGAAACACACTGGCTTATCGCAATTACAAGGTCCACCTAATACCCAAGTTACAAGTTGTAGTTCAGAGGACGAGAGCGGTACATCAAAGCCTGTTCGGACAGGAGGCGCGCGGCGTGGACTCCGATGGAGACGACGCAGGACTTTACCTGTACATTGCGTTAACTTACAAGCCCCGACAAATGAAAAGCTAACGGATACGCCTGGAGATGGAACCGTTGGAAGACAATTTAAAATATCATCCGATATTTCCACAGATAGCACTGACTTACAGTCAACTTCGAGTATGGCCACACAATCGGCGGATAATGCAGACGAAACGTGGCGCGGTGGGTACGCGACGGTTGCGACGCGAAGGAAGATAATGAACGCTTGCAGCTGGGGTAATGGCGTGCGGTGGGATCGAGCTGTGGGGAGAGTGGGTCAATGGGTGCGAATATATCCGCATTTACTACCTAATGAAGACCAAGTCCCGATGGAGGATGCCCGTGAAAGTGTCGCGCACGTTTCCAAATTCATTCGGGCAGCGCGTGAAGTGAGTCGTGATAGCGGAGGCGATGCTGCTATCCGCGATTCAGCGCGCGACTCTGTTTTCGAGGCCGCACTCCGAAGGAAGCTACAGTATGGCGCGCATTTTGAAGTGTGGCATCCGCCATTTTGA

Protein

MTSMPPCYHLPLEYAKLVSECSRLRRDEGVAGSSVVWIFKPVAQSQGRGIFLFRSVCEMSCGTAAVVQRYIERPLLIAGYKFDLRLYVCVPSYRPLTAYLYAEGLARFGTDKYTLSDIHNPYRHLTNSSLNKTGPRFAECKDRIGNGCKWTLKQVRRALIGRWGAAEWLVWQRIRALVTLTLLAQAAGTPPARNCFEFYGFDVLLDDSLKPWLLEVNLSPALGTNCEADIIVKQPMLHELFDLLGLPMKHTGLSQLQGPPNTQVTSCSSEDESGTSKPVRTGGARRGLRWRRRRTLPVHCVNLQAPTNEKLTDTPGDGTVGRQFKISSDISTDSTDLQSTSSMATQSADNADETWRGGYATVATRRKIMNACSWGNGVRWDRAVGRVGQWVRIYPHLLPNEDQVPMEDARESVAHVSKFIRAAREVSRDSGGDAAIRDSARDSVFEAALRRKLQYGAHFEVWHPPF

Uniprot

A0A212EGW3 A0A194R0Q8 A0A1Y1MY79 A0A1Y1N1U9 A0A3L8DGE9 A0A1Y1N4Y7 + More
F4X6J0 A0A026WT51 A0A195E6Y1 A0A088AHJ7 E2AHW8 A0A2A3EA39 A0A146L3G4 A0A0A9ZEM7

Pubmed

22118469 26354079 28004739 30249741 21719571 24508170 + More
20798317 26823975 25401762

EMBL

AGBW02015005 OWR40716.1 KQ460883 KPJ11287.1 GEZM01017511 JAV90641.1 + More
GEZM01017516 JAV90635.1 QOIP01000008 RLU19386.1 GEZM01017514 JAV90637.1 GL888818 EGI57950.1 KK107109 EZA59113.1 KQ979568 KYN20943.1 GL439602 EFN66958.1 KZ288310 PBC28588.1 GDHC01015626 JAQ03003.1 GBHO01003334 JAG40270.1

Proteomes

UP000007151 UP000053240 UP000279307 UP000007755 UP000053097 UP000078492 + More
UP000005203 UP000000311 UP000242457

Pfam

PF03133 TTL

Interpro

IPR013815 ATP_grasp_subdomain_1 + More
IPR004344 TTL/TTLL_fam

Gene 3D

3.30.1490.20

ProteinModelPortal

A0A212EGW3 A0A194R0Q8 A0A1Y1MY79 A0A1Y1N1U9 A0A3L8DGE9 A0A1Y1N4Y7 + More
F4X6J0 A0A026WT51 A0A195E6Y1 A0A088AHJ7 E2AHW8 A0A2A3EA39 A0A146L3G4 A0A0A9ZEM7

PDB

4YLS E-value=1.17684e-28, Score=316

KEGG

101742158 K16600 tubulin polyglutamylase TTLL2 [EC:6.-.-.-] | (RefSeq) probable tubulin polyglutamylase TTLL2

GO

GO:0006464 GO:0005524 GO:0005549 GO:0007608 GO:0016020 GO:0006397 GO:0005737 GO:0048869 GO:0003676 GO:0016491 GO:0015930

Length:

466

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0614

Exp number, first 60 AAs:

0.02947

Total prob of N-in:

0.00442

outside

1 - 466

Pi

288.375862

Theta

154.21673

Tajima's D

2.175951

CLR

0.000008

CSRT

0.906754662266887

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics