SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13260
Annotation
PREDICTED:_uncharacterized_protein_LOC101747137_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 3.145
 

Sequence

CDS
ATGGGGCTGGCATCACCCGTGCTAATAGAAGGGAAAGCGCTCACTCAGAGCATTTGGCGGAGCGAGATCGACTGGGACGACGTCATCCTGGAAAAGGACGAGGTGGCGTGGAAACGCTACATGGAGAACCTCCGCACGTTGCAAGGCCTCCGAATAGCAAGGTGCTTCTCGTGCTGCAACACTGAGGGGGAGCTGCACACGTTCACCGACGCCAGCGAGAAGGCCTACGCGTGTGCAGTCTATTGGCGTCAGAAGACAGATGAGAGCACCTACCGCGTCACGCTTCTAGCAGGGAAAGCCAGGGTGACCCCACTGAGACCAGTCTCTATCCCAAGGCTGGAGCTGCAAGCTGCACTGCTGGGGACAAGGATGGCGCAGGCGATAGCGAACGAATTGGACATCGCGGTCGGCAGAAGGACGTACTGGACTGACTCCAGTACAGTCCTGACATGGATAAAGACCGACCCACGCACGTTCAAACCTTTCGTTGCGCACCGACTCGCCGAGATAGAAGAGTCAACGAAGCCCCAAGAATGGCGATGGGTGCCTGGCTCGCAGAACCCAGCAGACGACGCAACTAGAGAGGCGCCGGCGGATTTCGACCACACGCATCGGTGGTTTAATGGACCCGAGTTCCTGTCGTGGGATGAATCGCGCTGGCCCAAGCCGCGAACATTCAAGCAAGAACCGTCTGGAGAAGAGAAAGAGGCCTTCCTGGTCGCCACGGCGAGGACCGCTGACGCTCGACCCACGCCCGATCCGCACAGATTCTCGAGCTGGGTCAAGTTATTGAGAGCAACAGCCAGGGTCCTCCAATTTATCGAGCTGTGTCGACCCCGGAAGGAGAGCGCCTGCGTGTCCAGACAATTGGAGCAGCAAGATCCCACGTGGAGGACGACGCGAGCGAAGCAGCCCCGATCAACATGGAAGATAAGGACTCCAGAAGCACCTACAAAAGCGTGGCTGCTGCTTGATCCAATCCACTTGAAGGAAGCGGAGAAGATCCTACTGAGAGGCAGCCAAGGAGAGAGCTTCGGTGAAAAAGATCCCGAACGTCACCCCAAGTTGCGACGGCTCGACGTCGTGATGGAAGATGGCCTGTTGCGCATGCACGGACGTATCGACGCAGCGCAATACATAGATGCAGACCGCAAGCGACCGATCGTACTGGACGGGAAGCACGTGATAGCGAGATTATTGATCAAACACTATCACGAGGCGTTCCAGCACGGCCCCGACAACCGTGTACGAACCGTCGACGTCAGAACGAGCGGCGGTCTGCTTAAGAGACCTGCCTCCAAGATGATCCTACTGGTGCCTGCAACGAGCGACGAGCCCACGCCCATAGAGTCGCCACGACAAGGAGTCGGTGCTACGCACGAGGGGGAGGATGTTGGCGACAGCGGCGTCGCCCCATAA
Protein
MGLASPVLIEGKALTQSIWRSEIDWDDVILEKDEVAWKRYMENLRTLQGLRIARCFSCCNTEGELHTFTDASEKAYACAVYWRQKTDESTYRVTLLAGKARVTPLRPVSIPRLELQAALLGTRMAQAIANELDIAVGRRTYWTDSSTVLTWIKTDPRTFKPFVAHRLAEIEESTKPQEWRWVPGSQNPADDATREAPADFDHTHRWFNGPEFLSWDESRWPKPRTFKQEPSGEEKEAFLVATARTADARPTPDPHRFSSWVKLLRATARVLQFIELCRPRKESACVSRQLEQQDPTWRTTRAKQPRSTWKIRTPEAPTKAWLLLDPIHLKEAEKILLRGSQGESFGEKDPERHPKLRRLDVVMEDGLLRMHGRIDAAQYIDADRKRPIVLDGKHVIARLLIKHYHEAFQHGPDNRVRTVDVRTSGGLLKRPASKMILLVPATSDEPTPIESPRQGVGATHEGEDVGDSGVAP

Summary

EMBL
AF530470    AAQ09229.1    AB042119    BAA95570.1    AB042118    BAA95569.1    + More
NWSH01008670    PCG62455.1    RSAL01000375    RVE42106.1    AAZX01023278    KQ459986    KPJ18861.1    LNIX01000003    OXA57597.1    LNIX01000039    OXA39294.1    LNIX01000019    OXA44812.1    LNIX01000004    OXA56382.1    OXA44855.1    LNIX01000015    OXA46575.1    LNIX01000007    OXA52015.1    JXUM01127084    KQ567147    KXJ69602.1    GEHC01000914    JAV46731.1    JXUM01013493    KQ560378    KXJ82704.1    GEHC01000967    JAV46678.1    JXUM01109099    KQ565290    KXJ71123.1    JXUM01005879    KQ560203    KXJ83865.1    GEZM01052587    JAV74399.1    GAMC01020594    JAB85961.1    GAMC01020598    GAMC01020596    GAMC01020592    JAB85959.1    JTDY01001530    KOB73634.1    GEHC01000872    JAV46773.1    GEZM01052586    JAV74401.1    GEHC01000947    JAV46698.1    LNIX01000018    OXA45362.1    LNIX01000012    OXA48117.1    GEHC01000913    JAV46732.1    GAMC01017930    JAB88625.1    GGFL01005193    MBW69371.1    APCN01002024    KQ460211    KPJ16510.1    JXUM01083542    KQ563383    KXJ73941.1    JXUM01136032    KQ568367    KXJ69026.1    GGFJ01001476    MBW50617.1    GGFL01001842    MBW66020.1    GGFJ01001462    MBW50603.1    GGFL01001682    MBW65860.1    AAGJ04043389    JXUM01031097    KQ560909    KXJ80382.1    JXUM01038372    KQ561162    KXJ79503.1    GGMR01005535    MBY18154.1    GGFJ01000302    MBW49443.1    GGFJ01000218    MBW49359.1    GAMC01020600    JAB85955.1    GGFJ01000306    MBW49447.1    LSMT01000554    PFX16342.1    GGFJ01000470    MBW49611.1    GGFJ01000471    MBW49612.1    GGFJ01000487    MBW49628.1    LN877231    CTR11689.1    AAGJ04125735    GGFJ01000432    MBW49573.1    ABLF02013940    ABLF02036313    ABLF02066938    ABLF02066950    JXUM01111221    KQ565482    KXJ70922.1    AAGJ04001285    AAGJ04091218    GCES01140631    JAQ45691.1    GCES01110894    JAQ75428.1    GGFJ01000333    MBW49474.1    GBYX01459357    JAO22202.1    GGMR01020500    MBY33119.1    GCES01111900    JAQ74422.1    AB110069    BAD01589.1    BAD01590.1    GCES01134385    JAQ51937.1    GCES01132273    JAQ54049.1    JXUM01009840    KQ560293    KXJ83223.1    GCES01103975    JAQ82347.1    KL367508    KFD68106.1    AAGJ04008210    GBYX01459355    JAO22204.1    KL367687    KFD60188.1    GEHC01000955    JAV46690.1    JXUM01130316    KQ567562    KXJ69370.1    GEHC01000945    JAV46700.1    KQ460970    KPJ10166.1    NWSH01001945    PCG69607.1    AAGJ04142769    AAGJ04142770    JXUM01008943    KQ560272    KXJ83402.1    JYDH01000002    KRY42884.1    JXUM01149621    KQ570816    KXJ68292.1    KL367527    KFD66131.1    JXUM01144298    KQ569759    KXJ68523.1    KL367480    KFD71819.1   
Pfam
PF03564   DUF1759        + More
PF05380   Peptidase_A17
PF00665   rve
PF18701   DUF5641
PF17921   Integrase_H2C2
PF05585   DUF1758
PF01565   FAD_binding_4
PF09129   Chol_subst-bind
PF00628   PHD
PF00078   RVT_1
Interpro
IPR040676   DUF5641        + More
IPR036397   RNaseH_sf       
IPR005312   DUF1759       
IPR001584   Integrase_cat-core       
IPR008042   Retrotrans_Pao       
IPR012337   RNaseH-like_sf       
IPR041588   Integrase_H2C2       
IPR008737   Peptidase_asp_put       
IPR001995   Peptidase_A2_cat       
IPR001878   Znf_CCHC       
IPR006094   Oxid_FAD_bind_N       
IPR016166   FAD-bd_PCMH       
IPR016164   FAD-linked_Oxase-like_C       
IPR016170   Cytok_DH_C_sf       
IPR015213   Cholesterol_OX_subst-bd       
IPR036318   FAD-bd_PCMH-like_sf       
IPR016169   FAD-bd_PCMH_sub2       
IPR016167   FAD-bd_PCMH_sub1       
IPR011011   Znf_FYVE_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR019787   Znf_PHD-finger       
IPR036875   Znf_CCHC_sf       
IPR019786   Zinc_finger_PHD-type_CS       
IPR000253   FHA_dom       
IPR000477   RT_dom       
IPR021109   Peptidase_aspartic_dom_sf       
IPR002999   Tudor       
IPR001841   Znf_RING       
IPR001969   Aspartic_peptidase_AS       
SUPFAM
SSF53098   SSF53098        + More
SSF56176   SSF56176       
SSF55103   SSF55103       
SSF57903   SSF57903       
SSF57756   SSF57756       

Ontologies

Topology

Length:
472
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00034
outside
1  -  472
 
 

Population Genetic Test Statistics

Pi
202.153278
Theta
154.466009
Tajima's D
1.242803
CLR
0
CSRT
0.728063596820159
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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