Gene
KWMTBOMO13252
Pre Gene Modal
BGIBMGA004727
Annotation
PREDICTED:_piggyBac_transposable_element-derived_protein_3-like?_partial_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.063
Sequence
CDS
ATGTTAAAGACGTTCTTGTTTGTAGCCTGTATCGCTAATGTGCTTCTAGCAGACTCTACTGAAGAAATCAAATGTAATCAGAATGAGGTATTCGATTTATGTCCTGCCCCATGTCCTCCAAGAAGATGCGGTATAGACCCAGCCTTAGTGCTTTGTGCTCCGTCGCCTACAATCGGAGATCCAGGTTGCGAGCCCGGCTGTCGATGTATTGACGGTTACGTCAGGAATGATACAGATGTTTGTATTCCGAAAGAAGAATGTCATATGGATTTAGCTATGGAGGACTTCGAATTTACGCAGGATGAATGGAAGCAAATCAACGCGTTAGAAATTTCTTTTTCGATCGCTTCTATAAACAATGACGCTCTCGTAGAATCGGATAGTGAACCCATGCAATTACCGAAAAAGAAAAGACGTTTGGTTATCGCAAGTGATAGTGATAGTGACAGTGAGTCGGCTGAAAATTTTGTTGCCGCCAATATATCGCAAAATGACCGTATTTCCTCAAAATGGTCGAGGCCAAAAAGACGACAGCCATCAGTGATTCCTTTCACCGAGTTCGAGGGTATGAAACCTCCATATTCTAATTTGCTGAAAGAAGCTGGCCCTGACCAGTATTATGATCTATTGGTGCCTGAAGAAATTCTTGAAATGATTGCTGAGCAGACAAATTTGTTCGCAAGTCAAAACATCACAGCCAGGCAAACAAAGCCTGGATCAAGGTCTCATTCATGGAAGCCAACAAACAAGACAGAAATAAAACAGTTTCTTGGGCTGGTCTTGTTTATGGGCGTAGTAAAGCTGCCGAAATTAGCTTATTATTGGCGCAAAGACAAGATACTTGGACAAACTTTTCCAGCCACCGTTATGAGTAGGAACCGCTTCGAGTTACTACTGCAATACCTACACTTTAGCGACAATTTATCTGTCGACAGAAACGATCGTATTGCCAAAATAAGACCTTTAATCGATGCTCTCAATGCTACTTTCCAGAAATATTATTCACCTAAAGAAGATGTTTGTGTGGATGAAAGCCAAGTACCTTTCAGAGGTCGAATAATATTCAGGCAATACAATAAAAGTAAGCGACACAAGTATGGCATGAAGCTATTTAAGTTATGTACTGTTCCCGGATATACTTGCAAACTTAATTTGTATAGTGGGAAAAACATTGACGCAATAAATACTACGCCAACAAATCTGGTGATGGCACTATGTGAAAATATATTTGACAAAGGACACACGCTAGCAACTGATAATTGGTACACTAGCTTGCAACTGGCTTATCGGTTATTGGAGAAGCAAACCCATTTAATTGGCACATTGCGAAAAAACAGAAGAGGATTGCCTAAAGCTGTTGTTGATTCGAAACTGCAAAAAGGTGAAACAATGGCTATGGAGAATGAAGATGGAGTAACAGTGCTTAAATGGAAAGATAAGAGGGACGTGCTTATGCTGTCGACAAAGCATTCCGACAAAATTGCTGTGGTGGTGAAAAAAGGCAAACAGATTCGTAAATCAAAAGTTATTTTGGATTATAATAAATCGAAAGGGTCTGTAGACATGAGTGACCAGATGGGTGCCTATTCTTCGCCATTGCGGAAAACCGTAAAATGGTATAGAAAATTGGCAATAGAACTACTTCTAAATACGGCAGTTGTAAATGCTTGGGTCATGTACAATGAAAATAAGCAGAGCAAATCTTCAATTGTCGACTTTAGGAGGGCTCTCATAAATTATTTGACTCGGCCAGCAGATTCCCAAGAAATAATTATCAATGAAAGACCTAAAAGACTCAAGCATGTTCTAAAATTAAAGGAAGGAAAAGTAAGAGACACGCGTCGTTTTTGCGTGAAATGTTATAAAGATTCAGTACAGGAATTTGGTCGTAAAGTAGCTAAGAATAAAGCTAAGAAAGTGAAAATCCAATGTAATAAGAATGAGGTATTCGATTTATGTCCTGCCCCATGTCCTCCAAGAAGATGCGGTATAGACCCAGCCACAGTGAATTGTATTCCGTCGCCTAAAATCGGAGATCCAGGTTGCGAGCCCGGCTGTAGATGTATTGACGGTTACGTCAGGAATGATACAGATGCTTGTATTCCCAAAGAAGAATGTCGGTCATCCGTGGTTATCGCACCATCTCCTTTGAGGCGGCGTGTGTACTGGCTGGGACGCTGCCTTGGATTCTGGAAGCGGAGGCGCTCGCCGCTGACTATCAGTGGCGGGCTGACCTTCGTGCCCGGGGCGTGGCGCGTCCCAGCCCCAGTGTGGTCAGAGCGCGGAAGGCCCAATCTCGGCGGTCCGTGCTGGAGTCATGGTCCAGACGGCTGGCTGATCCTTCGGCTGGTCGTAGGACCGTCGAGGCGTGACAGAGGACGCCTCACTTTCCGGCTCACGCAGGTGCTCACTGGGCATGGTTGCTTCGGTGAGTTCCTGCACCGGATCAGAGCCGAGCCGGCGGCAGAGTGCCACCATTGTGGTTGCGACTTGGATACGGCGGAGCACACGCTCGTTGCCTGCCCCGCATGGGAGGAGTGGCGCCGTGTCCTCGTCGCAAAAATAGGAAATGACTTGTCGTTGCCGAGTGTTGTGGCCTCGATGCTCGGCGACGACGAGTCGTGGAAGGCGGTGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGTGGCGGGGCGCGTGAGAGACGCACAATCCCGTCGCCGTCGAGCGGGGACCAGGGAGGCGAATCTCGCCCAAGCCCTGGCCCTCTAA
Protein
MLKTFLFVACIANVLLADSTEEIKCNQNEVFDLCPAPCPPRRCGIDPALVLCAPSPTIGDPGCEPGCRCIDGYVRNDTDVCIPKEECHMDLAMEDFEFTQDEWKQINALEISFSIASINNDALVESDSEPMQLPKKKRRLVIASDSDSDSESAENFVAANISQNDRISSKWSRPKRRQPSVIPFTEFEGMKPPYSNLLKEAGPDQYYDLLVPEEILEMIAEQTNLFASQNITARQTKPGSRSHSWKPTNKTEIKQFLGLVLFMGVVKLPKLAYYWRKDKILGQTFPATVMSRNRFELLLQYLHFSDNLSVDRNDRIAKIRPLIDALNATFQKYYSPKEDVCVDESQVPFRGRIIFRQYNKSKRHKYGMKLFKLCTVPGYTCKLNLYSGKNIDAINTTPTNLVMALCENIFDKGHTLATDNWYTSLQLAYRLLEKQTHLIGTLRKNRRGLPKAVVDSKLQKGETMAMENEDGVTVLKWKDKRDVLMLSTKHSDKIAVVVKKGKQIRKSKVILDYNKSKGSVDMSDQMGAYSSPLRKTVKWYRKLAIELLLNTAVVNAWVMYNENKQSKSSIVDFRRALINYLTRPADSQEIIINERPKRLKHVLKLKEGKVRDTRRFCVKCYKDSVQEFGRKVAKNKAKKVKIQCNKNEVFDLCPAPCPPRRCGIDPATVNCIPSPKIGDPGCEPGCRCIDGYVRNDTDACIPKEECRSSVVIAPSPLRRRVYWLGRCLGFWKRRRSPLTISGGLTFVPGAWRVPAPVWSERGRPNLGGPCWSHGPDGWLILRLVVGPSRRDRGRLTFRLTQVLTGHGCFGEFLHRIRAEPAAECHHCGCDLDTAEHTLVACPAWEEWRRVLVAKIGNDLSLPSVVASMLGDDESWKAVLDFCECTISQKEVAGRVRDAQSRRRRAGTREANLAQALAL
Summary
Uniprot
ProteinModelPortal
PDB
1CCV
E-value=0.00395744,
Score=99
Ontologies
GO
Topology
SignalP
Position: 1 - 17,
Likelihood: 0.998887
Length:
918
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.31034
Exp number, first 60 AAs:
0.00439
Total prob of N-in:
0.01371
outside
1 - 918
Population Genetic Test Statistics
Pi
176.660924
Theta
146.276038
Tajima's D
0
CLR
191.371571
CSRT
0.364481775911204
Interpretation
Uncertain
