SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13243
Pre Gene Modal
BGIBMGA004725
Annotation
PREDICTED:_aspartic_and_glutamic_acid-rich_protein-like_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.488
 

Sequence

CDS
ATGAAGTCACTAATTCTTTTTGTCGCTTTGGCTCATGCCGTCTTCATAATTCATTCAGCTGAACTTCCAAATAAGGAACTCAAAATATCTGCAACCGTGGACAAGAACATACCCACAGATGGATCTTCATCATCACTAACCGCTGATGCAAGTATCAGCTTTGGAAAATCGAATACAAAAGGAGAAGATGACGATGAAGAATACGACGGAAGTGATAATGCTGGGAATGATGAATATAAATACAAATTAACCAAGAAGCTCGTAAATAGTTGTCAATATAGTAAGAATTATAAAGACAAAACAAATTATGAAGATTGTGGTTGTAAATATTATGAAAGTGAGGAGGATAACAATGAGTATAAAGGCTATAATAGTGATGAAGATACTTGTGGTTGTCAAGACAATGAAGACAATGAAGACGAAGAAGAAGAAGAGGAAGAGTACGAAAGTGAAGAGTTTGAGTCCTCTGAGGAAATTAAAAAGTACAAGTATTCAAAATATAACGACGACAATAGTAACGATAGTGATAATAGTGATGACAGTGAGGACAGTGACGACAGCGAAGGTGAGGATTGGAACAAAAAATAA
Protein
MKSLILFVALAHAVFIIHSAELPNKELKISATVDKNIPTDGSSSSLTADASISFGKSNTKGEDDDEEYDGSDNAGNDEYKYKLTKKLVNSCQYSKNYKDKTNYEDCGCKYYESEEDNNEYKGYNSDEDTCGCQDNEDNEDEEEEEEEYESEEFESSEEIKKYKYSKYNDDNSNDSDNSDDSEDSDDSEGEDWNKK

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.991235
 
 
Length:
195
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.47131
Exp number, first 60 AAs:
1.47131
Total prob of N-in:
0.06632
outside
1  -  195
 
 

Population Genetic Test Statistics

Pi
275.942202
Theta
148.714124
Tajima's D
-0.385068
CLR
0.340285
CSRT
0.266486675666217
Interpretation
Uncertain
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