SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13242  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009951
Annotation
glutathione_S-transferase_epsilon_3_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.298
 

Sequence

CDS
ATGTTGTACAAACTAAACGCGAGCCCTCCGGCGCGCACTGCCATGATGGTGTGTGAACTCTTCAAGGTTCCTGTTAAAATGGTTGACGTAAATTTATCCAAAGGAGAACATTTTTCCCCGGAATATTTAAAGAGAAACCCTCTTCACACTGTACCTACTCTAGAAGATGGCGACCTGATTATTACTGATAGCCACGCGATTGCAATGTATCTCGCCGACAAATATGGAAAAGACGATAGTCTGTACCCTAAAGACTTAAAAAGCAGAGCAATAGTGAACCAAAGGTTATTCTTTGATAGCACGGTGTTGTTCTCTAGAATGAGAAGTGTTACTTTTCCAGTCATAATTGAAGGATGTAAAACTGTCACGGAGAAGCAAATTAATGACATTATCGAAGCATATGGTTATGTTGAAACTTATCTATCGAACACCAAATTCATAGCCACCAATAACTTGACGATTGCTGACATTTCTGCCTACGCCGTAGTTTCATCTCTCCTTTTTATTGTGCCTTTAGATGGAGCCAAATTCCCCAAAACACAAACGTGGTTGAATGAAATGGAAAAGAAACCTTTTGCACAGAAATATAATGTGAACGGCGTGGCCGAATTGGGCGCACTATTGAAAGAGAAACTTGGATCTTAA
Protein
MLYKLNASPPARTAMMVCELFKVPVKMVDVNLSKGEHFSPEYLKRNPLHTVPTLEDGDLIITDSHAIAMYLADKYGKDDSLYPKDLKSRAIVNQRLFFDSTVLFSRMRSVTFPVIIEGCKTVTEKQINDIIEAYGYVETYLSNTKFIATNNLTIADISAYAVVSSLLFIVPLDGAKFPKTQTWLNEMEKKPFAQKYNVNGVAELGALLKEKLGS

Summary

Similarity
Belongs to the GST superfamily.
EMBL
EF506488    ABS56976.1    BABH01040727    GCVX01000107    JAI18123.1    KX500033    + More
ARM39003.1    KM099183    AIL29313.1    GCVX01000125    JAI18105.1    NWSH01005772    PCG63962.1    AB232916    GEYN01000102    BAE80117.1    JAV02027.1    U66342    AAC35245.1    ODYU01008927    SOQ52931.1    GQ856239    ACX85225.1    AGBW02009555    OWR50525.1    GCVX01000120    JAI18110.1    KF929204    AHW45902.1    KJ468613    AIB07714.1    ODYU01009192    SOQ53446.1    MH177593    AYM01165.1    ODYU01010121    SOQ55004.1    KF482965    AIH07589.1    MH177589    AYM01161.1    GEYN01000101    JAV02028.1    KF482960    AIH07584.1    MH177588    AYM01160.1    EU289223    GU170399    ABX84142.1    ADP76648.1    KF929203    AHW45901.1    KT852953    ALR34895.1    MH177587    AYM01159.1    KF482959    AIH07583.1    AF526170    AAP75790.1    SOQ55005.1    AF526172    AAP75792.1    AF526171    AAP75791.1    ODYU01003852    SOQ43130.1    KA646899    AFP61528.1    AF147205    AAD54937.1    ODYU01003966    SOQ43371.1    KA646898    AFP61527.1    FJ233082    ACO83224.1    AF147206    AAD54938.1    GALX01005435    JAB63031.1    KU522318    APX61037.1    MF787213    AWX49641.1    GALX01003869    JAB64597.1    GFDG01000651    JAV18148.1    GFDG01000650    JAV18149.1    KF929205    AHW45903.1    CH933808    EDW08749.1    ODYU01007862    SOQ51007.1    KQ460685    KPJ12893.1    MH177582    AYM01154.1    KQ971311    EEZ98835.1    CM000158    EDW91635.1    ODYU01011645    SOQ57522.1    CM000362    CM002911    EDX07671.1    KMY94824.1    CH954179    EDV55076.1    CH902619    EDV36030.1    JTDY01009017    KOB64197.1    KX229711    APW77572.1    MH177586    AYM01158.1    JTDY01000981    KOB75213.1    DS233036    EDS27664.1    CH933816    EDW17222.1    EEZ98834.1    KF482958    AIH07582.1    MG879007    AWX68887.1    CM000071    EAL25890.1    CH480816    EDW48456.1    SOQ51006.1    JRES01000678    KNC29245.1    NWSH01001309    PCG71767.1    EDX07669.1    KMY94822.1    OUUW01000001    SPP75875.1    KJ637332    AIC76455.1    EEZ98833.1    EDW17223.2    MH177581    AYM01153.1    MF034820    AVT42186.1    MH177592    AYM01164.1    CH479183    EDW36396.1    MH177596    AYM01168.1    GQ131803    ACZ73898.1    AE013599    AAF57695.1    AY122149    AAM52661.1    EEZ98840.1    GFDL01006446    JAV28599.1    GFDL01006306    JAV28739.1    APGK01021182    APGK01021183    BT126591    KB740293    KB631672    AEE61555.1    ENN80934.1    ERL85262.1    EDW91637.1    GQ131804    ACZ73899.1    EAL25886.2   
Pfam
PF13417   GST_N_3        + More
PF14497   GST_C_3
PF02798   GST_N
PF00043   GST_C
Interpro
IPR004046   GST_C        + More
IPR036282   Glutathione-S-Trfase_C_sf       
IPR036249   Thioredoxin-like_sf       
IPR004045   Glutathione_S-Trfase_N       
IPR040079   Glutathione_S-Trfase       
IPR010987   Glutathione-S-Trfase_C-like       
SUPFAM
SSF52833   SSF52833        + More
SSF47616   SSF47616       
PDB
3VWX     E-value=2.66327e-49,     Score=490

Ontologies

Topology

Length:
214
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.59861
Exp number, first 60 AAs:
0.00133
Total prob of N-in:
0.11366
outside
1  -  214
 
 

Population Genetic Test Statistics

Pi
74.843207
Theta
159.53696
Tajima's D
-1.349093
CLR
148.234611
CSRT
0.0819459027048648
Interpretation
Uncertain
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