SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13238
Annotation
PREDICTED:_uncharacterized_protein_LOC105842123_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.118 PlasmaMembrane   Reliability : 1.767
 

Sequence

CDS
ATGTCTGATCGAAGTAAGCGTAGGAAGCGCGAGCGTGATCGTACACCTATCCCTGGTATGGAGAAGCGACTTCAAAAGATTTTGGATCGCTTAGACACTTTAGAAAGTTACAGGTTTCGCAATGATACTGAAGGTAGTACGACAACGCCGAGTGCGCGGTTGGCGCATGACGGCGCCATCGCGGCGGCAGCTGTCGCGTCGGGTGAGCCGCCTGCACCAATTGCTGTTTCAAGAAACGTCGAGTCGTCCGATGCAAGTTTGAATTTATCCGTGCCGTGCTCGAGTGCAACGATCAACGGTTCGGGTACGGGGGTATTGAATGAGGTGGCTGAGAAAATTGCTAATGCGATTGGTGCAATTCCGTTGGCAGTGAGAGTGCAACGCCTGTCATACGATCCCTGGTGCGCGATGTGGCTCTGGTGGCATCGAGTCCTAATCGTGAATTTCTACGTGAACTCGCCCGACAACATGCTTCAAACTCGCTGGATCAGAACCGTGCTCGTCAGGACGCTTATGTTAACAAGCGCCGCAATACAGTGCGCTCCTTTCAAAATGGAGATCTGGTGTTCGTGCGTAAGACAAGCCAAGCTACGGGCAAGTTGGACTCAGGAATGCGAGGGCCAAGTCACTGGCTCCTATGGCAATACAACGCAGGCGGCCGCAGAGTATATAATTCTATGGCGCGGCGAGTGGACACCAGATGTGTGCACTGCATTCTCTGAAAGGCTCTGCACTCTTACAGCGAGCATCCTGAGGGCTCTGCTCTACAGACACTGTGATGCGTACTCGTGTACTCCTGAGGGCTCTGCACTGTACGAGGACATTGAACAATCCGGCTCTGTTCGATGTTGTTTCTCGGTTGCTAAACGAATCGAAACATGTCTTACTGGTGACGAGCATCCAGTTAGTGAGGCAATTGATCATGCTGAAGCTGTTGAAGATCCATTCTCCGACTCCGATCGAATAACGGGCGAGGACGCACCGCCGTCAGGAGAGGCCGTCTAA
Protein
MSDRSKRRKRERDRTPIPGMEKRLQKILDRLDTLESYRFRNDTEGSTTTPSARLAHDGAIAAAAVASGEPPAPIAVSRNVESSDASLNLSVPCSSATINGSGTGVLNEVAEKIANAIGAIPLAVRVQRLSYDPWCAMWLWWHRVLIVNFYVNSPDNMLQTRWIRTVLVRTLMLTSAAIQCAPFKMEIWCSCVRQAKLRASWTQECEGQVTGSYGNTTQAAAEYIILWRGEWTPDVCTAFSERLCTLTASILRALLYRHCDAYSCTPEGSALYEDIEQSGSVRCCFSVAKRIETCLTGDEHPVSEAIDHAEAVEDPFSDSDRITGEDAPPSGEAV

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
334
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.42251
Exp number, first 60 AAs:
0.00115
Total prob of N-in:
0.31981
outside
1  -  334
 
 

Population Genetic Test Statistics

Pi
254.116881
Theta
155.113371
Tajima's D
2.488694
CLR
0.050616
CSRT
0.942602869856507
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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