Gene

KWMTBOMO13237

Pre Gene Modal

BGIBMGA009954

Annotation

PREDICTED:_ATP-sensitive_inward_rectifier_potassium_channel_11-like_[Plutella_xylostella]

Location

Bomo_Chr22(-):11186100-11186734      View in EpiBrowser

Full name

Guanylate cyclase      

Location in the cell

Nuclear   Reliability : 2.623

CDS

ATGTACACACAATTTTTTTGTATTTGTGTGTGTGAACTCTTATCACATAAGCTCTTCACTACGGTATTAGAAGACGTAATAAAGATGCTTACATGGGACTTCAAAGGCATAAATAACAATGACGTATTCCGGTCGCAACTTCGCTTTGTGGACGATTTGATGCTCTTTGCCGATGATTCAACTGATCTCCAAAGTATGCTACAAGAAATTTACGATGCTTCGTTAGAGATGGACCTGAAGATAAACATATCCAAAACTAAGCTGAGGAGGAATGCCTCTGACATTTCAAATTCAACGGTTAGGGTTGGTAAAAAACCACTAAATAGTGAACATCATGGGAATGTTGTATTCTTTGGTAGCGAACATCAAAGTAAAGATATCAGCAGAAGAATACAACTCGAATGGGCTGCATTCGAAGAAATGAAATTCAAAATCACCAAATCACCAAAATCACCAATAAGACACTAA

Protein

MYTQFFCICVCELLSHKLFTTVLEDVIKMLTWDFKGINNNDVFRSQLRFVDDLMLFADDSTDLQSMLQEIYDASLEMDLKINISKTKLRRNASDISNSTVRVGKKPLNSEHHGNVVFFGSEHQSKDISRRIQLEWAAFEEMKFKITKSPKSPIRH

Catalytic Activity

GTP = 3',5'-cyclic GMP + diphosphate

Similarity

Belongs to the ATP-dependent DNA ligase family.
Belongs to the ligand-gated ion channel (TC 1.A.9) family.

Uniprot

H9JKA3   A0A3S2TAR4   A4KWF4   A4KWG0   A4KWF2   A0A3S2TRE0   + More
S4NRD2   D7F157   D7F164   D7F165   D7F159   A0A3S2LUJ5   D7F158   A0A3S2KX72   A0A2W1BMB6   D7F166   A0A1I8ATT3   A0A2H1VY30   A0A1I7Z5Z9   A0A016UWI5   A0A016UTS3   D7F160   A0A2G8KBI6   A0A2H1VS24   A0A016S1D2   D7F176   H3E3P6   D7F177   A0A2W1B5F8   A0A016U3R5   W4YXJ1   W4YXJ0   A0A016VVN3   A0A016S795   A0A016WA79   A0A016WEQ1   A0A016TIA8   A0A2W1BZV1   H3FXG0   A0A2W1BCS2   A0A2G8JFM9   A0A016U3X5   H3FWQ5   A0A2G8LDC7   A0A2G8L2C7   A0A016S5B2   A0A224XSN7   A0A1E1XRS4   A0A0N5C0B1   A0A2W1BLC9   A0A0B2VAE2   D7F179   A0A023GMF8   A0A0B2VZ02   A0A0K0FAW8   A0A0B2USY0   A0A016UYJ1   A0A2G8K4F2   A0A023EXV2   A0A2G8KES6   H3F702   A0A016VCD9   A0A0N4WFA1   A0A016WAL0   A0A016VBP7   A0A016VEC1   A0A016VCU3   A0A016SGC3   A0A016SX67   A0A016TNL1   A0A016TNH6   A0A016TMT8   A0A016TNS4   A0A1I7ZX63   A0A2G8KF77  

EC Number

4.6.1.2

Pubmed

19121390    17360547    23622113    20470440    28756777    26392177    + More
25730766    29023486    18806794    29209593    25474469   

EMBL

BABH01041142    RSAL01002362    RVE40503.1    EF113399    EF113400    ABO45233.1    + More
EF113402    ABO45239.1    EF113398    EF113401    ABO45231.1    RSAL01000016    RVE53061.1    GAIX01012906    JAA79654.1    FJ265542    ADI61810.1    FJ265549    ADI61817.1    FJ265550    ADI61818.1    FJ265544    ADI61812.1    RSAL01000007    RVE54059.1    FJ265543    ADI61811.1    RSAL01002130    RVE40575.1    KZ150072    PZC74016.1    FJ265551    ADI61819.1    ODYU01004982    SOQ45402.1    JARK01001362    EYC18843.1    EYC18844.1    FJ265545    ADI61813.1    MRZV01000717    PIK45367.1    ODYU01004088    SOQ43598.1    JARK01001655    EYB84321.1    FJ265561    ADI61829.1    FJ265562    ADI61830.1    KZ150317    PZC71439.1    JARK01001396    EYC09581.1    AAGJ04144474    AAGJ04050748    JARK01001340    EYC30828.1    JARK01001621    EYB86109.1    JARK01000460    EYC36749.1    JARK01000347    EYC38051.1    JARK01001434    EYC02684.1    KZ149907    PZC78256.1    KZ150485    PZC70710.1    MRZV01002136    PIK34564.1    KE124867    JARK01001397    EPB76339.1    EYC09328.1    MRZV01000118    PIK58243.1    MRZV01000249    PIK54411.1    JARK01001626    EYB85833.1    GFTR01005437    JAW10989.1    GFAA01001426    JAU02009.1    KZ149985    PZC75698.1    JPKZ01001740    KHN80451.1    FJ265564    ADI61832.1    GBBM01001358    JAC34060.1    JPKZ01000640    KHN86200.1    JPKZ01003248    KHN72508.1    JARK01001359    EYC20046.1    MRZV01000899    PIK42833.1    GBBI01004876    JAC13836.1    MRZV01000640    PIK46507.1    JARK01001348    EYC25050.1    UZAF01017047    VDO37285.1    JARK01000472    EYC36631.1    EYC25049.1    EYC25048.1    EYC25046.1    JARK01001568    EYB89432.1    JARK01001500    JARK01001343    EYB95040.1    EYC28825.1    JARK01001424    EYC04316.1    EYC04315.1    EYC04314.1    EYC04317.1    MRZV01000629    PIK46657.1   

Proteomes

UP000005204    UP000283053    UP000095287    UP000024635    UP000230750    UP000005239    + More
UP000007110    UP000046392    UP000031036    UP000035680    UP000038042    UP000268014   

PRIDE

H9JKA3    D7F157    D7F164    D7F165    D7F159    D7F158    + More
D7F166    D7F160    D7F176    D7F177    D7F179   

Pfam

PF00078   RVT_1        + More
PF13855   LRR_8
PF14529   Exo_endo_phos_2
PF11411   DNA_ligase_IV
PF04675   DNA_ligase_A_N
PF04679   DNA_ligase_A_C
PF01068   DNA_ligase_A_M
PF01826   TIL
PF00067   p450
PF00034   Cytochrom_C
PF01549   ShK
PF02931   Neur_chan_LBD
PF00211   Guanylate_cyc
PF07714   Pkinase_Tyr
PF01094   ANF_receptor

Interpro

IPR000477   RT_dom        + More
IPR032675   LRR_dom_sf       
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR005135   Endo/exonuclease/phosphatase       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR001357   BRCT_dom       
IPR036420   BRCT_dom_sf       
IPR012340   NA-bd_OB-fold       
IPR016059   DNA_ligase_ATP-dep_CS       
IPR012310   DNA_ligase_ATP-dep_cent       
IPR021536   DNA_ligase_IV_dom       
IPR029710   LIG4       
IPR000977   DNA_ligase_ATP-dep       
IPR012308   DNA_ligase_ATP-dep_N       
IPR036599   DNA_ligase_N_sf       
IPR012309   DNA_ligase_ATP-dep_C       
IPR036084   Ser_inhib-like_sf       
IPR002919   TIL_dom       
IPR036396   Cyt_P450_sf       
IPR017972   Cyt_P450_CS       
IPR001128   Cyt_P450       
IPR002401   Cyt_P450_E_grp-I       
IPR002327   Cyt_c_1A/1B       
IPR009056   Cyt_c-like_dom       
IPR036909   Cyt_c-like_dom_sf       
IPR003582   ShKT_dom       
IPR006201   Neur_channel       
IPR018000   Neurotransmitter_ion_chnl_CS       
IPR036719   Neuro-gated_channel_TM_sf       
IPR006202   Neur_chan_lig-bd       
IPR036734   Neur_chan_lig-bd_sf       
IPR029052   Metallo-depent_PP-like       
IPR001828   ANF_lig-bd_rcpt       
IPR001245   Ser-Thr/Tyr_kinase_cat_dom       
IPR001170   ANPR/GUC       
IPR011009   Kinase-like_dom_sf       
IPR028082   Peripla_BP_I       
IPR001054   A/G_cyclase       
IPR000719   Prot_kinase_dom       
IPR029787   Nucleotide_cyclase       

SUPFAM

SSF56219   SSF56219        + More
SSF52113   SSF52113       
SSF50249   SSF50249       
SSF57567   SSF57567       
SSF48264   SSF48264       
SSF46626   SSF46626       
SSF90112   SSF90112       
SSF63712   SSF63712       
SSF56112   SSF56112       
SSF53822   SSF53822       
SSF55073   SSF55073       

Gene 3D

3.80.10.10     3.60.10.10     1.10.3260.10     3.40.50.10190     1.10.630.10     1.10.760.10     2.70.170.10     3.60.21.10     3.30.70.1230    

ProteinModelPortal

H9JKA3   A0A3S2TAR4   A4KWF4   A4KWG0   A4KWF2   A0A3S2TRE0   + More
S4NRD2   D7F157   D7F164   D7F165   D7F159   A0A3S2LUJ5   D7F158   A0A3S2KX72   A0A2W1BMB6   D7F166   A0A1I8ATT3   A0A2H1VY30   A0A1I7Z5Z9   A0A016UWI5   A0A016UTS3   D7F160   A0A2G8KBI6   A0A2H1VS24   A0A016S1D2   D7F176   H3E3P6   D7F177   A0A2W1B5F8   A0A016U3R5   W4YXJ1   W4YXJ0   A0A016VVN3   A0A016S795   A0A016WA79   A0A016WEQ1   A0A016TIA8   A0A2W1BZV1   H3FXG0   A0A2W1BCS2   A0A2G8JFM9   A0A016U3X5   H3FWQ5   A0A2G8LDC7   A0A2G8L2C7   A0A016S5B2   A0A224XSN7   A0A1E1XRS4   A0A0N5C0B1   A0A2W1BLC9   A0A0B2VAE2   D7F179   A0A023GMF8   A0A0B2VZ02   A0A0K0FAW8   A0A0B2USY0   A0A016UYJ1   A0A2G8K4F2   A0A023EXV2   A0A2G8KES6   H3F702   A0A016VCD9   A0A0N4WFA1   A0A016WAL0   A0A016VBP7   A0A016VEC1   A0A016VCU3   A0A016SGC3   A0A016SX67   A0A016TNL1   A0A016TNH6   A0A016TMT8   A0A016TNS4   A0A1I7ZX63   A0A2G8KF77  

KEGG

NA   

GO

GO:0003964   GO:0004519   GO:0005506   GO:0016705   GO:0020037   GO:0046872   GO:0009055   GO:0043005   GO:0005887   GO:0045202   GO:0034220   GO:0007268   GO:0050877   GO:0005230   GO:0007165   GO:0042391   GO:0004888   GO:0005524   GO:0016021   GO:0035556   GO:0004672   GO:0004383  

PANTHER

PTHR45997:SF1  

Length:

155

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0922

Exp number, first 60 AAs:

0.0922

Total prob of N-in:

0.16305

outside

1  -  155

 

 

Pi

124.541085

Theta

153.744735

Tajima's D

-0.622015

CLR

0

CSRT

0.218289085545723

Interpretation

Uncertain