SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13234
Pre Gene Modal
BGIBMGA009973
Annotation
PREDICTED:_carbohydrate_sulfotransferase_11_[Papilio_xuthus]
Full name
Carbohydrate sulfotransferase      
Location in the cell
Nuclear   Reliability : 1.91
 

Sequence

CDS
ATGACAATTTTCAAGAGCAACACCACAACTGCACCGGTGAAGGATTGGGCGATACCACCTGATAATTACACCAAATGGATGTTTCAGGGTCCAGTTATAGGCGATGACGAGCCTGAGACGGATTCGAATCAGAACCAATGGTTGGAGCCAGACAACATAACGGTCCAAGAACTAGAGCAACGCGTAATTAGAGTACAGAATGTTTGTCGTAAGCGACACCTGCCTTCAGATACAATAAATAACAAGGAATTCTTTGTAGATCACCTGCATAATCTCGTGTGGTGTAATGTTTTTAAAGCTGCCAGTTCCTCTTGGTTATACAAATTCAACATTCTAGGCGGTTACGATAGGAAATTTTTGGGAAGAACAAGGCAAACGCCTCTGATGCTGGCAAGAAAAAAGTTTCCACGTCCAAATGCCGAAGAATTGAAGGACTCTATAAACACGCCCGGCGTAATTTCTTTAATGATAGTTCGCGAGCCATTCGTTCGTCTCCTGTCAGCGTATCGGGATAAATTAGAGAACATAACTCCGCCATATTACAGAAAACTAGCGAGGGCCATCGTGGCCAGGCACAGGGAAGATGCAACAAAAATCCTTGGACCAATAAAAAGTTTCGGACCTACGTTTTACGAATTCGTAGCTTATTTGATACATAAACATAAGGAAAAAGATGAAAAATTTACTTTTGATGAGCACTGGGCGCCGTATTATCAGTTTTGCTCTCCGTGCGCAGTTAATTTTACAGTAATCGGTAAAGTGGAAACTCTTAAAAGGGACTCTGCGTATGTGATACAACAACTAGGTCTCGGACATTTGTTAGGTCGAACCACAGGGGATAAGCGGACGAGACTTCGTACAGTAATGAACAAATCAAGAGACGGAAAGAACACGACATCTATATTGAAATATTACTTTAGTCAACTAAATGAAAATTTGCTTAAAGATCTCTTGAATATTTACGGTATAGATTTCGAAATGTTTGGATATGATCCAAATGTGTATCAAAGTTTCGTTAGAAAATAA
Protein
MTIFKSNTTTAPVKDWAIPPDNYTKWMFQGPVIGDDEPETDSNQNQWLEPDNITVQELEQRVIRVQNVCRKRHLPSDTINNKEFFVDHLHNLVWCNVFKAASSSWLYKFNILGGYDRKFLGRTRQTPLMLARKKFPRPNAEELKDSINTPGVISLMIVREPFVRLLSAYRDKLENITPPYYRKLARAIVARHREDATKILGPIKSFGPTFYEFVAYLIHKHKEKDEKFTFDEHWAPYYQFCSPCAVNFTVIGKVETLKRDSAYVIQQLGLGHLLGRTTGDKRTRLRTVMNKSRDGKNTTSILKYYFSQLNENLLKDLLNIYGIDFEMFGYDPNVYQSFVRK

Summary

Similarity
Belongs to the sulfotransferase 2 family.
EC Number
2.8.2.-
EMBL
BABH01036744    KQ459586    KPI97986.1    KQ460883    KPJ11298.1    AGBW02013113    + More
OWR43961.1    JTDY01000397    KOB77370.1    ODYU01002682    SOQ40495.1    NEVH01017000    PNF24697.1    PYGN01001983    PSN31927.1    KK852601    KDR20510.1    JRES01000714    KNC29023.1    CH477639    EAT37943.1    JXUM01089185    JXUM01089186    KQ563751    KXJ73378.1    CH902620    EDV31767.1    CM000361    CM002910    EDX03810.1    KMY88279.1    CH954177    EDV57849.1    CH480820    EDW54358.1    AE014134    AY051453    AAF52238.1    AAK92877.1    AGB92630.1    CM000157    EDW88940.1    OUUW01000004    SPP79537.1    AXCM01001573    AXCN02000839    CVRI01000037    CRK93608.1    CH933807    EDW12332.1    AAAB01008984    EAA15163.4    CH379060    KRT04300.1    JXJN01012999    EAL33883.3    CH479180    EDW29171.1    CH963920    EDW78156.1    CH940649    EDW64577.1    APCN01003745    AJVK01004152    AJVK01004153    AJVK01004154    CCAG010014402    CCAG010014403    CCAG010014404    DS231822    EDS25795.1    ADMH02000581    ETN65775.1    CP012523    ALC38287.1    GEDC01014208    JAS23090.1    CH916372    EDV98836.1    AJWK01031561    UFQT01000144    SSX20840.1    KK853243    KDR09457.1    AJWK01035509    AXCM01006480    AXCM01006481    GDAI01002816    JAI14787.1    APGK01014012    APGK01052024    KB741208    KB739171    KB631654    ENN72858.1    ENN82357.1    ERL85063.1    GEZM01077621    GEZM01077620    JAV63233.1    KQ971355    EFA05831.1    ATLV01023045    KE525339    KFB48323.1    GBYB01003742    JAG73509.1    GDHC01003177    JAQ15452.1    GBHO01029251    JAG14353.1    GEDC01025447    JAS11851.1    KZ288226    PBC31884.1    JR047098    AEY60326.1    GAPW01001954    JAC11644.1    CVRI01000067    CRL06910.1    DS231833    EDS32298.1    AXCN02000879    AXCN02000880    APCN01001505    APCN01001506    AAAB01008960    EAA11525.4    QCYY01001875    ROT74611.1    KQ976423    KYM88771.1    GL888033    EGI69087.1    KQ983012    KYQ48355.1    GECZ01030087    GECZ01013471    JAS39682.1    JAS56298.1    GECU01015142    JAS92564.1    GECZ01019330    GECZ01006051    JAS50439.1    JAS63718.1   
Pfam
PF03567   Sulfotransfer_2
Interpro
IPR005331   Sulfotransferase        + More
IPR018011   Carb_sulfotrans_8-10       
IPR027417   P-loop_NTPase       
SUPFAM
SSF52540   SSF52540       

Ontologies

Topology

Subcellular location
Golgi apparatus membrane  
Length:
341
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.16307
Exp number, first 60 AAs:
0
Total prob of N-in:
0.07440
outside
1  -  341
 
 

Population Genetic Test Statistics

Pi
262.91049
Theta
207.238498
Tajima's D
0.860973
CLR
0.252702
CSRT
0.614569271536423
Interpretation
Uncertain
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