Gene

KWMTBOMO13232  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009976

Annotation

PREDICTED:_104_kDa_microneme/rhoptry_antigen_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr22(-):10931624-10962044      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.758

CDS

ATGTATCAGAGACCACCGTTCTGGCGGGTGCCACACCAACGCGTGGACCCTGAAGACGAGCCCAGGAACTTTGGTCAACGAAAGGTGACGCCAGGTACTCCGGCCGGCAGGGACTTAGTCCGTGGGGATATCATCGCGAAGATCGACGATTATGACGCACGTGACCTTCGACACGAGGACGCACAGAATCTATTCAAGAATGCTCCAAATCAGATTAAATTAGTCATACAAAGGGGCGGTTCGAGTCCTCATCTATACTCTGTACCACGCACGACGGGCAGCTATGTAGGCCGTGTGCCGACACCCACATTTTATCACGAGCTCGCCGAGGACGTGGAACGCGAAGGACTGAGAGGTTCAGGCACGCCACTAGCGCCACGTTCGCCCATACCCAACGCAAGCGCCACACCATTCAGGACTCCAAGCCCGTTGCCTCCGTCATGGCGTGGTCCGGAATCTCTGCCTCGCAGCACACCGGTGCCACCTTCGCAATTCCAGCCACAACTGGACGGCGAATACAGAACCTATCTGCTGTCGCCTTCTTCCACGCGCACCGATGAGACCATCGATGAGTCTATTCAGAGGAACGACTGGAGCCGCAGTACGCGATCGCTCTCTGTTCGATACACGTCCATACCTACAAGTGTAACAATGTCGCTCAACCCCAACTTCTTCCCGAACGGATACCAGGATCCTAAACATCCTGAAGAAGAAGTTGTCAGCAACTGGCCGTACCGCACCACTCCTCTCGTGCTCCCGGGAGCTAAGGTCCGAAGGGAGCCTGGCCCCACAGAGAGTTACCTGCGTCATCACCCCAACCCAGCAATGAGGGCACCTCCTAACCACGACTACCGTGATACCCTTATGAAACAAAAGGTGGCAGAGTCGGTGCTGCAGCGAGTGGTTGGCGAAGAGGCACCTAAGGTGTTGCACAAGCAATTCAACTCTCCAATCAATCTATACTCGGAACAGAACATTGCAAACTCTATCAGGCAGCAAACTTCGCCTCTGCCAACTAACGGCCATTACGGACGGCCGCACGTTGTCAAGAGGCAATACGACCCCGCCAAGTCCGAGACGTACCGCGCGCTGCAGGAGGACGGCCTGCCCGACGCCGCCACCGAACTCTCCGCGCCCGTCGCCACCAAGGTCTTCACAGCGCCGACCAGCAAGAGGCCAGCGCCTACACCGAAACCGACGAAGCAGTCCGACGCGAAACCGAAAGGAAAACAAACGACCTTCGTAAATTCACTACACGAAGAACACATTCAACAGTCGAATTCATTCAAACGCCTCATGTTCAACGTACTTGGGGACACCGAATTCTAA

Protein

MYQRPPFWRVPHQRVDPEDEPRNFGQRKVTPGTPAGRDLVRGDIIAKIDDYDARDLRHEDAQNLFKNAPNQIKLVIQRGGSSPHLYSVPRTTGSYVGRVPTPTFYHELAEDVEREGLRGSGTPLAPRSPIPNASATPFRTPSPLPPSWRGPESLPRSTPVPPSQFQPQLDGEYRTYLLSPSSTRTDETIDESIQRNDWSRSTRSLSVRYTSIPTSVTMSLNPNFFPNGYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESVLQRVVGEEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTKQSDAKPKGKQTTFVNSLHEEHIQQSNSFKRLMFNVLGDTEF

Uniprot

A0A2H1V2M4   A0A3S2LFS1   I4DIK1   A0A0L7LPB7   A0A2J7RJJ5   A0A2J7RJJ3   + More
A0A2J7RJJ9   A0A2J7RJJ7   A0A0Q9WHM8   A0A0Q9WI76   A0A151I117   A0A151XB97   A0A0Q9XBU0   A0A0R3P7K3   A0A3B0JAD3   A0A0Q9WRP5   A0A3B0J5U0   A0A0R3P980   A0A0Q9WZW3   A0A0Q9XKG2   A0A0R3P929   B4LEL6   A0A1W4US39   A0A195E804   A0A195F284   B4HK07   A0A0Q9XMT3   Q29D06   A0A0Q9WPB0   Q058U1   A0A0J9UHE3   A0A026WSY6   E1JI73   A0A0J9RRJ4   B4KZ65   A0A1W4UF88   A0A1W4UEP9   W8BZG7   A0A0A1XRR8   A0A0R1DUV9   Q95TZ7   A0A0J9RRZ2   A0A2J7RJJ8   A0A0Q9WP65   E2B6V5   Q8IQB4   A0A0J9RRM9   A0A0P8Y9N2   A0A1W4USC5   B3M679   A0A0Q9WZ91   A0A0P9C3B8   A0A034W4M8   A0A182QFX6   B4PFL1   W8BCA8   A0A0N8P0V3   A0A0M4EI34   T1PDC1   E2AHW2   A0A1J1I8S2   A0A034W0I2   A0A0M8ZNK4   A0A1J1ICE8   A0A1I8NBW7   A0A1I8NBW4   N6U6S5   A0A1J1I780   U4UGN0   A0A1I8Q0C5   A0A1I8Q081   A0A1I8Q0B0   A0A1I8Q0A1   A0A0Q9WIP2  

Pubmed

22651552    26227816    17994087    15632085    10731132    12537568    + More
12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    24508170    24495485    25830018    17550304    20798317    25348373    25315136    23537049   

EMBL

ODYU01000392    SOQ35097.1    RSAL01000018    RVE52832.1    AK401119    BAM17741.1    + More
JTDY01000397    KOB77373.1    NEVH01002992    PNF41005.1    PNF41006.1    PNF41007.1    PNF41003.1    CH940647    KRF84173.1    KRF84179.1    KQ976580    KYM79892.1    KQ982335    KYQ57599.1    CH933809    KRG05805.1    CH379070    KRT09096.1    OUUW01000002    SPP77393.1    KRF84177.1    SPP77394.1    KRT09091.1    CH963847    KRF97736.1    KRG05812.1    KRT09093.1    EDW69101.2    KQ979568    KYN20949.1    KQ981864    KYN34199.1    CH480815    EDW40743.1    KRG05809.1    EAL30608.3    KRF97733.1    BT029127    AE014296    ABJ17060.1    ACZ94653.1    CM002912    KMY98435.1    KK107109    EZA59107.1    BT133470    ACZ94656.1    AFH97160.1    KMY98441.1    EDW17862.2    GAMC01011916    JAB94639.1    GBXI01000298    JAD13994.1    CM000159    KRK00966.1    AY058415    AAL13644.1    AAN11991.2    KMY98447.1    PNF41004.1    KRF97737.1    GL446009    EFN88596.1    AAN11990.2    KMY98438.1    CH902618    KPU78162.1    EDV39699.2    KRF97740.1    KPU78160.1    GAKP01009857    JAC49095.1    AXCN02000346    EDW93137.2    GAMC01011917    JAB94638.1    KPU78164.1    CP012525    ALC43451.1    KA646684    AFP61313.1    GL439602    EFN66952.1    CVRI01000043    CRK96114.1    GAKP01009851    JAC49101.1    KQ435969    KOX67895.1    CRK96113.1    APGK01037555    APGK01037556    APGK01037557    KB740948    ENN77350.1    CRK96112.1    KB632288    ERL91503.1    KRF84178.1   

Proteomes

UP000283053    UP000037510    UP000235965    UP000008792    UP000078540    UP000075809    + More
UP000009192    UP000001819    UP000268350    UP000007798    UP000192221    UP000078492    UP000078541    UP000001292    UP000000803    UP000053097    UP000002282    UP000008237    UP000007801    UP000075886    UP000092553    UP000000311    UP000183832    UP000053105    UP000095301    UP000019118    UP000030742    UP000095300   

PRIDE

Q058U1    E1JI73    Q95TZ7    Q8IQB4   

Pfam

PF00595   PDZ        + More
PF15936   DUF4749
PF00379   Chitin_bind_4

Interpro

IPR031847   DUF4749        + More
IPR006643   Zasp-like_motif       
IPR001478   PDZ       
IPR036034   PDZ_sf       
IPR031311   CHIT_BIND_RR_consensus       
IPR000618   Insect_cuticle       

SUPFAM

SSF50156   SSF50156       

ProteinModelPortal

A0A2H1V2M4   A0A3S2LFS1   I4DIK1   A0A0L7LPB7   A0A2J7RJJ5   A0A2J7RJJ3   + More
A0A2J7RJJ9   A0A2J7RJJ7   A0A0Q9WHM8   A0A0Q9WI76   A0A151I117   A0A151XB97   A0A0Q9XBU0   A0A0R3P7K3   A0A3B0JAD3   A0A0Q9WRP5   A0A3B0J5U0   A0A0R3P980   A0A0Q9WZW3   A0A0Q9XKG2   A0A0R3P929   B4LEL6   A0A1W4US39   A0A195E804   A0A195F284   B4HK07   A0A0Q9XMT3   Q29D06   A0A0Q9WPB0   Q058U1   A0A0J9UHE3   A0A026WSY6   E1JI73   A0A0J9RRJ4   B4KZ65   A0A1W4UF88   A0A1W4UEP9   W8BZG7   A0A0A1XRR8   A0A0R1DUV9   Q95TZ7   A0A0J9RRZ2   A0A2J7RJJ8   A0A0Q9WP65   E2B6V5   Q8IQB4   A0A0J9RRM9   A0A0P8Y9N2   A0A1W4USC5   B3M679   A0A0Q9WZ91   A0A0P9C3B8   A0A034W4M8   A0A182QFX6   B4PFL1   W8BCA8   A0A0N8P0V3   A0A0M4EI34   T1PDC1   E2AHW2   A0A1J1I8S2   A0A034W0I2   A0A0M8ZNK4   A0A1J1ICE8   A0A1I8NBW7   A0A1I8NBW4   N6U6S5   A0A1J1I780   U4UGN0   A0A1I8Q0C5   A0A1I8Q081   A0A1I8Q0B0   A0A1I8Q0A1   A0A0Q9WIP2  

PDB

1V5L     E-value=0.0711825,     Score=85

KEGG

101737298    no KO assigned | (RefSeq) PDZ and LIM domain protein 3

GO

GO:0007498   GO:0051371   GO:0008157   GO:0030239   GO:0030018   GO:0042302   GO:0005515   GO:0051536   GO:0016491   GO:0016829   GO:0005737   GO:0048869   GO:0003676   GO:0015930  

Length:

442

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00123

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00496

outside

1  -  442

 

 

Pi

202.162458

Theta

175.536916

Tajima's D

-1.368216

CLR

1.579998

CSRT

0.0785460726963652

Interpretation

Possibly Positive selection