Pre Gene Modal
BGIBMGA009983
Annotation
PREDICTED:_ribosome_biogenesis_protein_BRX1_homolog_[Papilio_xuthus]
Full name
Ribosome biogenesis protein BRX1 homolog
Alternative Name
Brix domain-containing protein 2 homolog
Location in the cell
Mitochondrial Reliability : 2.36
Sequence
CDS
ATGGTAAAAGTTAAGAAACCTTCCAAAGTAAAACAACGAATCACTGAACCCGTAACTAAAGATGAAAATGTACCTTTACCTCCAGTACGAATGTCTAGTGATCCTGCACCCAAACAGGTGAAATGGATAAACAGACAGAGGGTACTCGTCTTTGCGATGAGAGGTATCAATCATCGTCACAGGCATTTAATGGAAGATATTAAGAAATTAATGCCACATCATAAGACAGAGTCCAAAATGGAGAGAAGCAAAAACTTGTATGTTGTTAATGAAATTAGCGAGATGAAAAACTGCAACAAATGCATTTTATTTGAAGGAAGAAAGATGAGGGATTTATATATGTGGATATCTAATATACCCAATGGACCAAGTGCTAAATTTTTGGTGGAAAACATTTATACTATGGGGGAACTGAAAATGACTGGCAATTGTTTGAGAGGATCTAGGCCTTTGTTATCTTTCGATCCACAGTTTACAAAAGATCCTCACTACTGCTTACTGAAAGAATTACTGGTACAAATTTTTGGTGTACCTAATTATCATCCAAAAAGTCAACCATTTTTCGATCATGTGTATACCTTTATGGTATTAGATAACAGAATTTGGTTCAGAAATTATCAGATTCTGTCTGAAGATGGTGCTTTAGCTGAAATAGGACCACGATTTGTATTGAATCCTGTCAAGATATTCTCAGGATCGTTTGGTGGTGCAACATTATGGGAAAATCCTAAATACATTAGTCCTGCCAAACTAAGACAGGCTTATTCTAGAAAAGCAGGTAACAAATATGAAAACAGGATCGAAAAGAAGGCCTTGTATGAAGCAACAAAACCTGAAACAGGCTACCCTGATATAGAAGGTGCAGATTTCTTCAAAGGAAATCCAATAGAAAAGGCAAAGGAAGTGATTATAAAAGAGGAAATTGAAAACGAGACTTCTGTAGCAGAGGGTAGATTTGTGAAGAAGCCAGTATTTTCTATAAAATCATCTAACCGTCCTGATAAGGTTATCAGAAGGAAACAATTGAAAGCTAAAAGCAAACTTATTTCTGATCAAATAAAGAAACGAAAACAATTTAAAAAGAAAAAACCTTCTAAAATGTAA
Protein
MVKVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQRVLVFAMRGINHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMWISNIPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIFGVPNYHPKSQPFFDHVYTFMVLDNRIWFRNYQILSEDGALAEIGPRFVLNPVKIFSGSFGGATLWENPKYISPAKLRQAYSRKAGNKYENRIEKKALYEATKPETGYPDIEGADFFKGNPIEKAKEVIIKEEIENETSVAEGRFVKKPVFSIKSSNRPDKVIRRKQLKAKSKLISDQIKKRKQFKKKKPSKM
Summary
Description
Required for biogenesis of the 60S ribosomal subunit.
Similarity
Belongs to the BRX1 family.
Keywords
Complete proteome
Nucleus
Reference proteome
Ribosome biogenesis
Feature
chain Ribosome biogenesis protein BRX1 homolog
Uniprot
H9JKD2
A0A2H1V4Z2
S4NMS1
A0A194Q3I2
A0A194R620
A0A0L7KU54
+ More
A0A212FFE7 E9IPX9 D6X2R7 A0A158NSW2 A0A195DPN6 A0A151I093 A0A151X5U4 A0A195EXH5 F4WSJ8 A0A154PEL4 A0A232EZR3 E2AFS7 K7IM03 A0A0J7K9M1 A0A0K8TSG6 A0A195CSV0 A0A3L8DV55 A0A0C9RAE8 A0A0N0BD64 A0A1I8N076 N6STV3 A0A2A3EKA8 B3M906 J3JXQ1 A0A1I8PXI5 B4J1H7 A0A088AD36 E2BNX2 A0A0L0CPQ0 A0A067REJ9 W8BRC9 A0A034VVP5 A0A240SY16 B4H7Y5 A0A1B6FE47 Q29D54 A0A0K8UF98 A0A3B0J5Q7 A0A1W4W647 B4PHT4 A0A1B6JRZ8 A0A1B6IZH6 A0A0K8UKG1 A0A1A9UTQ7 B3NC16 A0A2P8XJ97 A0A2J7RHR5 B4HU40 A0A0M3QW47 A0A0J9RNP5 B4LBQ6 B4QQJ4 A0A1A9ZG25 A0A1B6E3U0 A0A1L8DSA5 Q9VZE6 B4NLY8 A0A1A9XGS2 A0A0A9XMP1 U5EX77 A0A0K8TIJ9 T1I7W4 A0A0P4VQQ9 A0A224XIY1 A0A210PEC9 A0A0V0GDJ6 A0A182YNN0 T1GVJ1 A0A0B7BU22 A0A1Q3EXW8 A0A182JBQ1 Q17JQ6 A0A1S4F0C9 A0A182V2T0 Q7Q7D7 A0A182XD13 A0A182KW40 A0A182HME3 E9HB73 B0WRY6 A0A182G8L9 A0A2R7W8J4 A0A084WEW6 A0A164W9K3 E9GIB8 A0A182MEH4 A0A0P5XG23 A0A2C9M1A6 A0A0P6IPM0 A0A0N8CR23 A0A182K6U0 A0A0P5LXC5
A0A212FFE7 E9IPX9 D6X2R7 A0A158NSW2 A0A195DPN6 A0A151I093 A0A151X5U4 A0A195EXH5 F4WSJ8 A0A154PEL4 A0A232EZR3 E2AFS7 K7IM03 A0A0J7K9M1 A0A0K8TSG6 A0A195CSV0 A0A3L8DV55 A0A0C9RAE8 A0A0N0BD64 A0A1I8N076 N6STV3 A0A2A3EKA8 B3M906 J3JXQ1 A0A1I8PXI5 B4J1H7 A0A088AD36 E2BNX2 A0A0L0CPQ0 A0A067REJ9 W8BRC9 A0A034VVP5 A0A240SY16 B4H7Y5 A0A1B6FE47 Q29D54 A0A0K8UF98 A0A3B0J5Q7 A0A1W4W647 B4PHT4 A0A1B6JRZ8 A0A1B6IZH6 A0A0K8UKG1 A0A1A9UTQ7 B3NC16 A0A2P8XJ97 A0A2J7RHR5 B4HU40 A0A0M3QW47 A0A0J9RNP5 B4LBQ6 B4QQJ4 A0A1A9ZG25 A0A1B6E3U0 A0A1L8DSA5 Q9VZE6 B4NLY8 A0A1A9XGS2 A0A0A9XMP1 U5EX77 A0A0K8TIJ9 T1I7W4 A0A0P4VQQ9 A0A224XIY1 A0A210PEC9 A0A0V0GDJ6 A0A182YNN0 T1GVJ1 A0A0B7BU22 A0A1Q3EXW8 A0A182JBQ1 Q17JQ6 A0A1S4F0C9 A0A182V2T0 Q7Q7D7 A0A182XD13 A0A182KW40 A0A182HME3 E9HB73 B0WRY6 A0A182G8L9 A0A2R7W8J4 A0A084WEW6 A0A164W9K3 E9GIB8 A0A182MEH4 A0A0P5XG23 A0A2C9M1A6 A0A0P6IPM0 A0A0N8CR23 A0A182K6U0 A0A0P5LXC5
Pubmed
19121390
23622113
26354079
26227816
22118469
21282665
+ More
18362917 19820115 21347285 21719571 28648823 20798317 20075255 26369729 30249741 25315136 23537049 17994087 22516182 26108605 24845553 24495485 25348373 15632085 17550304 29403074 22936249 10731132 12537572 12537569 25401762 26823975 27129103 28812685 25244985 17510324 12364791 14747013 17210077 20966253 21292972 26483478 24438588 15562597
18362917 19820115 21347285 21719571 28648823 20798317 20075255 26369729 30249741 25315136 23537049 17994087 22516182 26108605 24845553 24495485 25348373 15632085 17550304 29403074 22936249 10731132 12537572 12537569 25401762 26823975 27129103 28812685 25244985 17510324 12364791 14747013 17210077 20966253 21292972 26483478 24438588 15562597
EMBL
BABH01036769
ODYU01000696
SOQ35898.1
GAIX01014226
JAA78334.1
KQ459586
+ More
KPI97970.1 KQ460883 KPJ11311.1 JTDY01005816 KOB66591.1 AGBW02008829 OWR52443.1 GL764659 EFZ17309.1 KQ971372 EFA09831.1 ADTU01025191 KQ980653 KYN14833.1 KQ976619 KYM79126.1 KQ982494 KYQ55704.1 KQ981923 KYN32928.1 GL888322 EGI62813.1 KQ434889 KZC10293.1 NNAY01001466 OXU23865.1 GL439158 EFN67676.1 LBMM01011009 KMQ87083.1 GDAI01000527 JAI17076.1 KQ977305 KYN03778.1 QOIP01000004 RLU24186.1 GBYB01010052 JAG79819.1 KQ435878 KOX69984.1 APGK01056711 KB741277 KB631624 ENN71104.1 ERL84775.1 KZ288220 PBC32138.1 CH902618 EDV38950.1 BT128021 AEE62983.1 CH916366 EDV95868.1 GL449511 EFN82564.1 JRES01000080 KNC34353.1 KK852511 KDR22306.1 GAMC01004908 GAMC01004906 GAMC01004904 GAMC01004902 JAC01648.1 GAKP01011546 JAC47406.1 AJWK01006928 CH479219 EDW34775.1 GECZ01021273 JAS48496.1 CH379070 EAL30560.1 GDHF01027284 JAI25030.1 OUUW01000002 SPP77167.1 CM000159 EDW93393.2 GECU01005814 JAT01893.1 GECU01015394 JAS92312.1 GDHF01025117 JAI27197.1 CH954178 EDV50904.1 PYGN01001944 PSN32073.1 NEVH01003737 PNF40373.1 CH480817 EDW50461.1 CP012525 ALC43519.1 CM002912 KMY97556.1 CH940647 EDW68683.1 CM000363 EDX09200.1 GEDC01004720 JAS32578.1 GFDF01004854 JAV09230.1 AE014296 AY118916 CH964278 EDW85356.1 GBHO01025219 GDHC01004271 JAG18385.1 JAQ14358.1 GANO01001070 JAB58801.1 GBRD01000600 JAG65221.1 ACPB03018168 GDKW01002412 JAI54183.1 GFTR01005422 JAW11004.1 NEDP02076749 OWF34840.1 GECL01000356 JAP05768.1 CAQQ02133676 HACG01049547 CEK96412.1 GFDL01014888 JAV20157.1 CH477231 EAT46918.1 AAAB01008960 EAA10980.4 APCN01004410 GL732614 EFX71001.1 DS232062 DS232212 EDS33596.1 EDS37714.1 JXUM01008038 JXUM01008039 KK854460 PTY16032.1 ATLV01023260 KE525341 KFB48760.1 LRGB01001274 KZS13078.1 GL732546 EFX80650.1 AXCM01001699 GDIQ01163736 GDIP01072816 JAK87989.1 JAM30899.1 GDIQ01007793 JAN86944.1 GDIP01107263 JAL96451.1 GDIQ01166689 JAK85036.1
KPI97970.1 KQ460883 KPJ11311.1 JTDY01005816 KOB66591.1 AGBW02008829 OWR52443.1 GL764659 EFZ17309.1 KQ971372 EFA09831.1 ADTU01025191 KQ980653 KYN14833.1 KQ976619 KYM79126.1 KQ982494 KYQ55704.1 KQ981923 KYN32928.1 GL888322 EGI62813.1 KQ434889 KZC10293.1 NNAY01001466 OXU23865.1 GL439158 EFN67676.1 LBMM01011009 KMQ87083.1 GDAI01000527 JAI17076.1 KQ977305 KYN03778.1 QOIP01000004 RLU24186.1 GBYB01010052 JAG79819.1 KQ435878 KOX69984.1 APGK01056711 KB741277 KB631624 ENN71104.1 ERL84775.1 KZ288220 PBC32138.1 CH902618 EDV38950.1 BT128021 AEE62983.1 CH916366 EDV95868.1 GL449511 EFN82564.1 JRES01000080 KNC34353.1 KK852511 KDR22306.1 GAMC01004908 GAMC01004906 GAMC01004904 GAMC01004902 JAC01648.1 GAKP01011546 JAC47406.1 AJWK01006928 CH479219 EDW34775.1 GECZ01021273 JAS48496.1 CH379070 EAL30560.1 GDHF01027284 JAI25030.1 OUUW01000002 SPP77167.1 CM000159 EDW93393.2 GECU01005814 JAT01893.1 GECU01015394 JAS92312.1 GDHF01025117 JAI27197.1 CH954178 EDV50904.1 PYGN01001944 PSN32073.1 NEVH01003737 PNF40373.1 CH480817 EDW50461.1 CP012525 ALC43519.1 CM002912 KMY97556.1 CH940647 EDW68683.1 CM000363 EDX09200.1 GEDC01004720 JAS32578.1 GFDF01004854 JAV09230.1 AE014296 AY118916 CH964278 EDW85356.1 GBHO01025219 GDHC01004271 JAG18385.1 JAQ14358.1 GANO01001070 JAB58801.1 GBRD01000600 JAG65221.1 ACPB03018168 GDKW01002412 JAI54183.1 GFTR01005422 JAW11004.1 NEDP02076749 OWF34840.1 GECL01000356 JAP05768.1 CAQQ02133676 HACG01049547 CEK96412.1 GFDL01014888 JAV20157.1 CH477231 EAT46918.1 AAAB01008960 EAA10980.4 APCN01004410 GL732614 EFX71001.1 DS232062 DS232212 EDS33596.1 EDS37714.1 JXUM01008038 JXUM01008039 KK854460 PTY16032.1 ATLV01023260 KE525341 KFB48760.1 LRGB01001274 KZS13078.1 GL732546 EFX80650.1 AXCM01001699 GDIQ01163736 GDIP01072816 JAK87989.1 JAM30899.1 GDIQ01007793 JAN86944.1 GDIP01107263 JAL96451.1 GDIQ01166689 JAK85036.1
Proteomes
UP000005204
UP000053268
UP000053240
UP000037510
UP000007151
UP000007266
+ More
UP000005205 UP000078492 UP000078540 UP000075809 UP000078541 UP000007755 UP000076502 UP000215335 UP000000311 UP000002358 UP000036403 UP000078542 UP000279307 UP000053105 UP000095301 UP000019118 UP000030742 UP000242457 UP000007801 UP000095300 UP000001070 UP000005203 UP000008237 UP000037069 UP000027135 UP000092461 UP000008744 UP000001819 UP000268350 UP000192221 UP000002282 UP000078200 UP000008711 UP000245037 UP000235965 UP000001292 UP000092553 UP000008792 UP000000304 UP000092445 UP000000803 UP000007798 UP000092443 UP000015103 UP000242188 UP000076408 UP000015102 UP000075880 UP000008820 UP000075903 UP000007062 UP000076407 UP000075882 UP000075840 UP000000305 UP000002320 UP000069940 UP000030765 UP000076858 UP000075883 UP000076420 UP000075881
UP000005205 UP000078492 UP000078540 UP000075809 UP000078541 UP000007755 UP000076502 UP000215335 UP000000311 UP000002358 UP000036403 UP000078542 UP000279307 UP000053105 UP000095301 UP000019118 UP000030742 UP000242457 UP000007801 UP000095300 UP000001070 UP000005203 UP000008237 UP000037069 UP000027135 UP000092461 UP000008744 UP000001819 UP000268350 UP000192221 UP000002282 UP000078200 UP000008711 UP000245037 UP000235965 UP000001292 UP000092553 UP000008792 UP000000304 UP000092445 UP000000803 UP000007798 UP000092443 UP000015103 UP000242188 UP000076408 UP000015102 UP000075880 UP000008820 UP000075903 UP000007062 UP000076407 UP000075882 UP000075840 UP000000305 UP000002320 UP000069940 UP000030765 UP000076858 UP000075883 UP000076420 UP000075881
ProteinModelPortal
H9JKD2
A0A2H1V4Z2
S4NMS1
A0A194Q3I2
A0A194R620
A0A0L7KU54
+ More
A0A212FFE7 E9IPX9 D6X2R7 A0A158NSW2 A0A195DPN6 A0A151I093 A0A151X5U4 A0A195EXH5 F4WSJ8 A0A154PEL4 A0A232EZR3 E2AFS7 K7IM03 A0A0J7K9M1 A0A0K8TSG6 A0A195CSV0 A0A3L8DV55 A0A0C9RAE8 A0A0N0BD64 A0A1I8N076 N6STV3 A0A2A3EKA8 B3M906 J3JXQ1 A0A1I8PXI5 B4J1H7 A0A088AD36 E2BNX2 A0A0L0CPQ0 A0A067REJ9 W8BRC9 A0A034VVP5 A0A240SY16 B4H7Y5 A0A1B6FE47 Q29D54 A0A0K8UF98 A0A3B0J5Q7 A0A1W4W647 B4PHT4 A0A1B6JRZ8 A0A1B6IZH6 A0A0K8UKG1 A0A1A9UTQ7 B3NC16 A0A2P8XJ97 A0A2J7RHR5 B4HU40 A0A0M3QW47 A0A0J9RNP5 B4LBQ6 B4QQJ4 A0A1A9ZG25 A0A1B6E3U0 A0A1L8DSA5 Q9VZE6 B4NLY8 A0A1A9XGS2 A0A0A9XMP1 U5EX77 A0A0K8TIJ9 T1I7W4 A0A0P4VQQ9 A0A224XIY1 A0A210PEC9 A0A0V0GDJ6 A0A182YNN0 T1GVJ1 A0A0B7BU22 A0A1Q3EXW8 A0A182JBQ1 Q17JQ6 A0A1S4F0C9 A0A182V2T0 Q7Q7D7 A0A182XD13 A0A182KW40 A0A182HME3 E9HB73 B0WRY6 A0A182G8L9 A0A2R7W8J4 A0A084WEW6 A0A164W9K3 E9GIB8 A0A182MEH4 A0A0P5XG23 A0A2C9M1A6 A0A0P6IPM0 A0A0N8CR23 A0A182K6U0 A0A0P5LXC5
A0A212FFE7 E9IPX9 D6X2R7 A0A158NSW2 A0A195DPN6 A0A151I093 A0A151X5U4 A0A195EXH5 F4WSJ8 A0A154PEL4 A0A232EZR3 E2AFS7 K7IM03 A0A0J7K9M1 A0A0K8TSG6 A0A195CSV0 A0A3L8DV55 A0A0C9RAE8 A0A0N0BD64 A0A1I8N076 N6STV3 A0A2A3EKA8 B3M906 J3JXQ1 A0A1I8PXI5 B4J1H7 A0A088AD36 E2BNX2 A0A0L0CPQ0 A0A067REJ9 W8BRC9 A0A034VVP5 A0A240SY16 B4H7Y5 A0A1B6FE47 Q29D54 A0A0K8UF98 A0A3B0J5Q7 A0A1W4W647 B4PHT4 A0A1B6JRZ8 A0A1B6IZH6 A0A0K8UKG1 A0A1A9UTQ7 B3NC16 A0A2P8XJ97 A0A2J7RHR5 B4HU40 A0A0M3QW47 A0A0J9RNP5 B4LBQ6 B4QQJ4 A0A1A9ZG25 A0A1B6E3U0 A0A1L8DSA5 Q9VZE6 B4NLY8 A0A1A9XGS2 A0A0A9XMP1 U5EX77 A0A0K8TIJ9 T1I7W4 A0A0P4VQQ9 A0A224XIY1 A0A210PEC9 A0A0V0GDJ6 A0A182YNN0 T1GVJ1 A0A0B7BU22 A0A1Q3EXW8 A0A182JBQ1 Q17JQ6 A0A1S4F0C9 A0A182V2T0 Q7Q7D7 A0A182XD13 A0A182KW40 A0A182HME3 E9HB73 B0WRY6 A0A182G8L9 A0A2R7W8J4 A0A084WEW6 A0A164W9K3 E9GIB8 A0A182MEH4 A0A0P5XG23 A0A2C9M1A6 A0A0P6IPM0 A0A0N8CR23 A0A182K6U0 A0A0P5LXC5
PDB
6EM5
E-value=4.98768e-64,
Score=620
Ontologies
PANTHER
Topology
Subcellular location
Length:
367
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03119
Exp number, first 60 AAs:
0.00013
Total prob of N-in:
0.08862
outside
1 - 367
Population Genetic Test Statistics
Pi
324.234134
Theta
221.898659
Tajima's D
1.413627
CLR
0
CSRT
0.765211739413029
Interpretation
Uncertain
