Silkworm Genome Informatics Database

Gene

KWMTBOMO13204

Pre Gene Modal

BGIBMGA009957

Annotation

PREDICTED:_cAMP-specific_3'?5'-cyclic_phosphodiesterase?_isoform_F_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr22(+):10169877-10175315 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.616

CDS

ATGTCCGCGTGTGTAGTGGAAGAAGGTAGGGAGGAGGGAGGCGGCGCGTGCGCTGTCGACATGTCTAATGACAGTGGCGATGACATGCCGCAGCCGCCGCGCAGGGAGGTCCTGCTGAGCGCCCGAGGCCGCAGAGCCTGTTCGGAACAAGGCCCGCATCCATCTCTAGGCTACTTGCAGTACGGGACTTCACACCTTTGGGGCGCCAATAACAGCCGCCGTGGGTGGAGTCGGAAACGGACATCGGCCCCGCAGATGAGTAACGTGCATGGTTCAATGCCACGTGTTGCTCTCGTGTTACGGTCACGGCGTAGCTGGCCTGTCGCTCCGCAGTCTTGCCGCAGGTAA

Protein

MSACVVEEGREEGGGACAVDMSNDSGDDMPQPPRREVLLSARGRRACSEQGPHPSLGYLQYGTSHLWGANNSRRGWSRKRTSAPQMSNVHGSMPRVALVLRSRRSWPVAPQSCRR

Uniprot

A0A194PY60 A0A194R0T8 A0A212F5J0 A0A0L7LF06 A0A2P8YRP7 J9KTE3 + More
A0A026X1G3 A0A195C103 A0A151WH29

Pubmed

26354079 22118469 26227816 29403074 24508170

EMBL

KQ459586 KPI97963.1 KQ460883 KPJ11317.1 AGBW02010187 OWR49000.1 + More
JTDY01001402 KOB73964.1 PYGN01000406 PSN46913.1 ABLF02018892 ABLF02018893 KK107031 EZA62125.1 KQ978457 KYM93851.1 KQ983136 KYQ47118.1

Proteomes

UP000053268 UP000053240 UP000007151 UP000037510 UP000245037 UP000007819 + More
UP000053097 UP000078542 UP000075809

Pfam

PF14000 Packaging_FI

Interpro

IPR025147 Packaging_FI

ProteinModelPortal

A0A194PY60 A0A194R0T8 A0A212F5J0 A0A0L7LF06 A0A2P8YRP7 J9KTE3 + More
A0A026X1G3 A0A195C103 A0A151WH29

KEGG

101742254 K13293 cAMP-specific phosphodiesterase 4 [EC:3.1.4.53] | (RefSeq) cAMP-specific 3',5'-cyclic phospho

GO

GO:0016021

Length:

115

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00203

Exp number, first 60 AAs:

0.00079

Total prob of N-in:

0.28980

outside

1 - 115

Pi

195.125555

Theta

145.935238

Tajima's D

0.770709

CLR

0.000061

CSRT

0.586770661466927

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics