Gene

KWMTBOMO13200  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009987

Annotation

PREDICTED:_NADH_dehydrogenase_[ubiquinone]_1_beta_subcomplex_subunit_7_[Papilio_machaon]

Location

Bomo_Chr22(-):10071214-10074406      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.093

CDS

ATGGGGCAAATTATGGGAGGATATCATGCTCGCTCTGTGGACCTGAATTCAGACGATAATCCTACTTTTGACCCTCAAGCTGGATTTCAATACGAAAGAAAACAACGAGAAATGATTGCTAAGGAAGAAGATCTTATTTCGGCTCGTATACCCAATAAATATAGAGACTACTGCGCTCACTATTTACTGGACTATCAAGTTTGTCGCTATAAAGAAATGCCGCTTCTTTATCGATGCGCCCATGAGAAACACAATTATTTGAATTGCGAACAACAAGATTACGTTTTACGTATGAAGGAATTTGAACGGGAACGTCGCCTTAGAGTACGGGAAAATCGGATTAGTGCTACTGCCTAA

Protein

MGQIMGGYHARSVDLNSDDNPTFDPQAGFQYERKQREMIAKEEDLISARIPNKYRDYCAHYLLDYQVCRYKEMPLLYRCAHEKHNYLNCEQQDYVLRMKEFERERRLRVRENRISATA

Uniprot

H9JKD6   S4Q098   A0A194R0K8   I4DL91   A0A3S2NWU6   A0A212F1I6   + More
A0A1E1W3N6   A0A2H1VC38   A0A2A4J5B4   A0A0L7K4U6   A0A0L7KXS9   B4L250   B4M8E1   B4JL10   Q9VXZ0   B4R4X8   A0A3Q7YR78   Q6XHM6   A0A3Q7YS97   A0A3B0JB65   B3MY77   A0A0M4EZ92   A0A3R7PJ66   W8C0F1   Q29II4   B4MTB5   A0A034WRU9   A0A0K8TPD0   B4H2I9   A0A0C9QI49   B3NUW0   A0A0K8UYF5   A0A1W4VFV0   T1H5N3   B0VZS9   A0A2P8XQK5   A0A1B0CMS2   A0A1B0DID3   T1J207   A0A067RJ77   D6X169   N6U9M9   A0A0M9A779   T1HHP5   A0A0P4VLN1   A0A1I8N3Y3   A0A1L8EH83   A0A224XPG4   A0A0T6B3B5   A0A1I8NMN7   U5ESL6   I3KHR1   A0A0L0CQ14   A0A195FVV4   A0A3P8VR03   A0A1B6KDR7   F4WLM5   C4N196   A0A1A9XDW0   A0A1B0B8J7  

Pubmed

19121390    23622113    26354079    22651552    22118469    26227816    + More
17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    14525923    17550304    24495485    15632085    25348373    26369729    29403074    24845553    18362917    19820115    23537049    27129103    25315136    25186727    26108605    24487278    21719571    19576987   

EMBL

BABH01036832    BABH01036833    GAIX01000163    JAA92397.1    KQ460883    KPJ11328.1    + More
AK402059    KQ459586    BAM18681.1    KPI97952.1    RSAL01000040    RVE50948.1    AGBW02010868    OWR47599.1    GDQN01009459    JAT81595.1    ODYU01001568    SOQ37962.1    NWSH01003294    PCG66603.1    JTDY01010679    JTDY01001687    KOB58101.1    KOB73155.1    JTDY01004609    KOB67955.1    CH933810    EDW06790.1    CH940653    EDW62417.1    CH916370    EDW00263.1    AE014298    BT011534    KX531925    AAF48416.1    AAS15670.1    AHN59729.1    AHN59730.1    ANY27735.1    CM000366    EDX17935.1    GQ314165    GQ314166    GQ314167    GQ314168    GQ314169    GQ314170    GQ314171    GQ314172    GQ314173    GQ314174    GQ314175    GQ314176    GQ314177    GQ314178    GQ314179    ADG54468.1    ADG54469.1    ADG54470.1    ADG54471.1    ADG54472.1    ADG54473.1    ADG54474.1    ADG54475.1    ADG54476.1    ADG54477.1    ADG54478.1    ADG54479.1    ADG54480.1    ADG54481.1    ADG54482.1    AY232157    GQ314133    GQ314134    GQ314135    GQ314136    GQ314137    GQ314138    GQ314139    GQ314140    GQ314141    GQ314142    GQ314143    GQ314144    GQ314145    GQ314146    GQ314147    GQ314148    CM000162    AAR10180.1    ADG54436.1    ADG54437.1    ADG54438.1    ADG54439.1    ADG54440.1    ADG54441.1    ADG54442.1    ADG54443.1    ADG54444.1    ADG54445.1    ADG54446.1    ADG54447.1    ADG54448.1    ADG54449.1    ADG54450.1    ADG54451.1    EDX01728.1    GQ314149    GQ314150    GQ314151    GQ314152    GQ314153    GQ314154    GQ314155    GQ314156    GQ314157    GQ314158    GQ314159    GQ314160    GQ314161    GQ314162    GQ314163    GQ314164    ADG54452.1    ADG54453.1    ADG54454.1    ADG54455.1    ADG54456.1    ADG54457.1    ADG54458.1    ADG54459.1    ADG54460.1    ADG54461.1    ADG54462.1    ADG54463.1    ADG54464.1    ADG54465.1    ADG54466.1    ADG54467.1    OUUW01000003    SPP77733.1    CH902632    EDV32571.1    CP012528    ALC49442.1    QCYY01002704    ROT68229.1    GAMC01001415    GAMC01001413    JAC05143.1    CH379063    EAL32669.1    CH963851    EDW75354.1    GAKP01002459    GAKP01002458    JAC56493.1    GDAI01001394    JAI16209.1    CH479204    EDW30556.1    GBYB01014388    JAG84155.1    CH954180    EDV47058.1    GDHF01033869    GDHF01033056    GDHF01020736    GDHF01016097    JAI18445.1    JAI19258.1    JAI31578.1    JAI36217.1    DS231815    EDS35171.1    PYGN01001529    PSN34255.1    AJWK01019137    AJWK01019138    AJWK01019139    AJWK01019140    AJWK01019141    AJWK01019142    AJWK01019143    AJVK01015501    AJVK01015502    AJVK01015503    AJVK01015504    AJVK01015505    AJVK01015506    JH431791    KK852652    KDR19402.1    KQ971368    EFA10667.1    APGK01043557    KB741015    KB632161    ENN75312.1    ERL89251.1    KQ435720    KOX78655.1    ACPB03001018    GDKW01003008    JAI53587.1    GFDG01000732    JAV18067.1    GFTR01002049    JAW14377.1    LJIG01016017    KRT81865.1    GANO01003192    JAB56679.1    AERX01023479    JRES01000182    KNC33524.1    KQ981208    KYN44775.1    GEBQ01030390    JAT09587.1    GL888208    EGI64961.1    EZ048869    ACN69161.1    JXJN01009945   

Proteomes

UP000005204    UP000053240    UP000053268    UP000283053    UP000007151    UP000218220    + More
UP000037510    UP000009192    UP000008792    UP000001070    UP000000803    UP000000304    UP000002282    UP000268350    UP000007801    UP000092553    UP000283509    UP000001819    UP000007798    UP000008744    UP000008711    UP000192221    UP000015102    UP000002320    UP000245037    UP000092461    UP000092462    UP000027135    UP000007266    UP000019118    UP000030742    UP000053105    UP000015103    UP000095301    UP000095300    UP000005207    UP000037069    UP000078541    UP000265120    UP000007755    UP000092443    UP000092460   

PRIDE

H9JKD6    Q9VXZ0   

Pfam

PF05676   NDUF_B7        + More
PF00005   ABC_tran
PF00664   ABC_membrane
PF01753   zf-MYND
PF00176   SNF2_N
PF00271   Helicase_C

Interpro

IPR008698   NADH_UbQ_OxRdtase_B18_su        + More
IPR003593   AAA+_ATPase       
IPR039421   Type_I_exporter       
IPR017871   ABC_transporter_CS       
IPR003439   ABC_transporter-like       
IPR027417   P-loop_NTPase       
IPR011527   ABC1_TM_dom       
IPR036640   ABC1_TM_sf       
IPR002893   Znf_MYND       
IPR014001   Helicase_ATP-bd       
IPR000330   SNF2_N       
IPR029060   PIN-like_dom_sf       
IPR038718   SNF2-like_sf       
IPR001650   Helicase_C       

SUPFAM

SSF52540   SSF52540        + More
SSF90123   SSF90123       
SSF88723   SSF88723       

Gene 3D

1.20.1560.10     3.40.50.10810    

CDD

cd00079  HELICc

ProteinModelPortal

H9JKD6   S4Q098   A0A194R0K8   I4DL91   A0A3S2NWU6   A0A212F1I6   + More
A0A1E1W3N6   A0A2H1VC38   A0A2A4J5B4   A0A0L7K4U6   A0A0L7KXS9   B4L250   B4M8E1   B4JL10   Q9VXZ0   B4R4X8   A0A3Q7YR78   Q6XHM6   A0A3Q7YS97   A0A3B0JB65   B3MY77   A0A0M4EZ92   A0A3R7PJ66   W8C0F1   Q29II4   B4MTB5   A0A034WRU9   A0A0K8TPD0   B4H2I9   A0A0C9QI49   B3NUW0   A0A0K8UYF5   A0A1W4VFV0   T1H5N3   B0VZS9   A0A2P8XQK5   A0A1B0CMS2   A0A1B0DID3   T1J207   A0A067RJ77   D6X169   N6U9M9   A0A0M9A779   T1HHP5   A0A0P4VLN1   A0A1I8N3Y3   A0A1L8EH83   A0A224XPG4   A0A0T6B3B5   A0A1I8NMN7   U5ESL6   I3KHR1   A0A0L0CQ14   A0A195FVV4   A0A3P8VR03   A0A1B6KDR7   F4WLM5   C4N196   A0A1A9XDW0   A0A1B0B8J7  

PDB

5O31     E-value=1.09125e-13,     Score=179

KEGG

101741007    K03963 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7 | (RefSeq) NADH dehydrogenase [ub

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0008137   GO:0005739   GO:0016021   GO:0042626   GO:0005524   GO:0003954   GO:0006120   GO:0005747   GO:0046872   GO:0003824   GO:0016829   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

PANTHER

PTHR20900   PTHR24221  

Length:

118

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.16033

outside

1  -  118

 

 

Pi

286.196879

Theta

198.64018

Tajima's D

1.378832

CLR

0

CSRT

0.758862056897155

Interpretation

Uncertain