SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13198
Pre Gene Modal
BGIBMGA009990
Annotation
_putative_cuticle_protein_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.019
 

Sequence

CDS
ATGATCACCCAAATAAATACTACTGTTTTGCCGTTAATTCTTTCTATTACTGCAATAAAAGTTCCAGTTGATGATAAGGAGGATGATACCACCGAAGCAGTCTCCTCAACTTCGGACGACAGTCAAAAACCTATAAATTATTACACGCAAGACGATACGAATTTAGATAGTTACCTTATACCTCCAAATCCCCATCAATCCCATGAGGTGCTTCCCGATTCTGTCATAACGCCAGCCACTTACCTATTGCCACCGTCATCAGAACAGCAGCCTGGGTATTATTATCCATCAACGGAACCTGGCGAACAAAGTGATTGGTACCCCATTGCTCAGGGTAAACCAATTCCACTGCAAACACCATCTATTTTGCCCCCACTAAAAATAGAGACCGAAGTACCGGTATTTTCAACCAATCCGAAGGAATCTAAAAAATTGAGAGGTATAAGGGTTGGAAGGGTGAGGGATTTGGAAAAGTTCGATCCTCGCAAGCCTATTCTTAACCTTGAACCACCATCTGTTAGTGCGCCTGATGAATACGCATTCAAGACTCCCTCTGAACAGCTAGAGCTTCCGTTTGAAGAAACATTACATGTAAAACCGTCTAACTTCAAACCACCTTATGTAGATACTGATAGCAGAAATCACCTTCAAACCCATAGCATAAATCCTATTGAACCAACTTTGGCATTGCATTTGGTACCACCGAAACCATTATCAAAACATAAAGTGCCCACAAAATTATATCCAAAGAAATATCCGGGTGAATTTAAGCCCGTTTCCATTCCAATAGCACAATTTGCAGATGATCTAATAGAAATTCCTAAAGCTAAACCCGTAAAGCCTTTCCATCCAATTGCAAATATTGAAAACGATTTTGTTCCCCAATTAGACGACAAAAGGATATTTTTATATCAACAAGCCGAAGAGAAACGGAAACTGAAAAACGAAATTCAAGTTCCACAGCATCAACATTTCGAGAGTGGTCCCTTGCAATCGTACACTGAAGCTATACCATCGGAACAAGATGTCTCAGAGACGCATTACGCATCGCCTGGCCGGAATGCTTACCCCGCGCCTCTTCGTCAAGCTCGTAATTCGAAGTCGTCTCCGGCGCCTGACGAGAGAACAGAATTCCGTATGCACGGCATGAAAGGGCCACATAGCTATCAATTTGGCTACGACACTGGAAAGGGCAAAAACCGCCAATTCCGTTACGAAGAGCGAGACAATGACGGTCTGATCAAGGGGCATTACGGTTACATGGATAAGCGCGGTAAACTAAGAGTTGTTAATTATAGCGCTCATCCCGAATTGGGTTTCCATGCCGAAGCACCGGTAGAGACAGAACAATAG
Protein
MITQINTTVLPLILSITAIKVPVDDKEDDTTEAVSSTSDDSQKPINYYTQDDTNLDSYLIPPNPHQSHEVLPDSVITPATYLLPPSSEQQPGYYYPSTEPGEQSDWYPIAQGKPIPLQTPSILPPLKIETEVPVFSTNPKESKKLRGIRVGRVRDLEKFDPRKPILNLEPPSVSAPDEYAFKTPSEQLELPFEETLHVKPSNFKPPYVDTDSRNHLQTHSINPIEPTLALHLVPPKPLSKHKVPTKLYPKKYPGEFKPVSIPIAQFADDLIEIPKAKPVKPFHPIANIENDFVPQLDDKRIFLYQQAEEKRKLKNEIQVPQHQHFESGPLQSYTEAIPSEQDVSETHYASPGRNAYPAPLRQARNSKSSPAPDERTEFRMHGMKGPHSYQFGYDTGKGKNRQFRYEERDNDGLIKGHYGYMDKRGKLRVVNYSAHPELGFHAEAPVETEQ

Summary

Pfam
PF00379   Chitin_bind_4
Interpro
IPR000618   Insect_cuticle       

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.542496
 
 
Length:
450
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01934
Exp number, first 60 AAs:
0.01934
Total prob of N-in:
0.00871
outside
1  -  450
 
 

Population Genetic Test Statistics

Pi
232.326938
Theta
167.779244
Tajima's D
1.061382
CLR
0
CSRT
0.67881605919704
Interpretation
Uncertain
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