SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13193
Annotation
PREDICTED:_uncharacterized_protein_LOC106139030_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.153
 

Sequence

CDS
ATGGAGGTTATTCCACCGTGCAGAAGCCGCATCTTCGTGGCCTTCTTTGCGACCATCTTCTGGGGAATGGGAGTACGAGGCCTCCATAATTTGGAAATCAACGTGCCAAATGCAGTGCTACTCGGTGAGACCGTAACTCTAGAATGTAGCTGGCAGCTTGAAGATGAAGAGGCTCTATACAGCGTCAAATGGTATCGCGGAAGAGAAGAATTCTATAGATATATACCAAAAGAATTACCGCACACCAGAGTATTTCCTCTACCAGGAATAGAAGTTGATATATCAAGATCAGGAGCGCGGCGCGTGGTCCTACAGCAGGCGACACCGGCGATGGCGGGTCGATTCCGTTGTGAAGTGTCAGCCGACGCGCCAACATTCCACACGGAAATACGCTCGGCACCCCTAGAAGTCGTCGCAGATGGCGTTGTTAAGCCACGCGAAGCCAATGAGTACTTGGTTTAA
Protein
MEVIPPCRSRIFVAFFATIFWGMGVRGLHNLEINVPNAVLLGETVTLECSWQLEDEEALYSVKWYRGREEFYRYIPKELPHTRVFPLPGIEVDISRSGARRVVLQQATPAMAGRFRCEVSADAPTFHTEIRSAPLEVVADGVVKPREANEYLV

Summary

EMBL
KQ460883    KPJ11332.1    KQ459586    KPI97948.1    JTDY01005181    KOB67287.1    + More
GEDC01022337    JAS14961.1    GECZ01007749    JAS62020.1    AGBW02012463    OWR45013.1    ACPB03009157    ACPB03009158    GEDC01016464    JAS20834.1    KQ461073    KPJ09728.1    ODYU01005117    SOQ45667.1    JTDY01000682    KOB76242.1    GEBQ01026883    JAT13094.1    RSAL01000005    RVE54359.1    GDHC01007619    GDHC01001123    JAQ11010.1    JAQ17506.1    GBRD01002473    JAG63348.1    KZ149892    PZC79032.1    KK852553    KDR21479.1    GGMR01000230    MBY12849.1    KPI97818.1    AGBW02014308    OWR41903.1    ABLF02037252    ABLF02036471    ABLF02036486    ABLF02036491    GGMS01002168    GGMS01015876    MBY71371.1    MBY85079.1    GGMR01007640    MBY20259.1    GGMS01002046    MBY71249.1    GALX01007885    JAB60581.1    GEZM01037955    JAV81824.1    GEBQ01012365    GEBQ01001796    JAT27612.1    JAT38181.1    GEDC01007169    JAS30129.1    GECZ01027093    GECZ01026046    GECZ01008857    JAS42676.1    JAS43723.1    JAS60912.1    GEZM01001797    JAV97520.1    KQ460323    KPJ15901.1    GECU01037070    JAS70636.1    KQ971326    KYB28502.1    KZ150028    PZC74777.1    NWSH01003920    PCG65689.1    KYB28501.1    ODYU01005533    SOQ46477.1    GEDC01010861    JAS26437.1    KQ459597    KPI95256.1    GEBQ01015836    JAT24141.1    GEBQ01021105    JAT18872.1    GEDC01020595    JAS16703.1    CH933806    EDW15280.2    JRES01000501    KNC30756.1    CCAG010022516    GDIQ01182211    JAK69514.1    ODYU01012075    SOQ58182.1    APGK01028659    KB740694    ENN79474.1    CH916369    EDV92647.1    GDIP01232685    GDIQ01033370    LRGB01000402    JAI90716.1    JAN61367.1    KZS19236.1    CH940656    EDW58668.2    GDIP01125446    JAL78268.1    GAMC01006456    GAMC01006455    JAC00101.1    BABH01026188    GDIQ01022565    JAN72172.1    GL732595    EFX72800.1    GECU01023417    JAS84289.1    GEZM01040863    JAV80727.1    CH964232    EDW81484.1    CH480837    EDW49127.1    BABH01018664    CH477642    EAT37904.1    AAAB01008984    EAA14948.4    CH902617    EDV43609.1    CH954182    EDV53332.1    AJWK01004813    KZ150026    PZC74798.1    JRES01000973    KNC26630.1    CM000364    EDX14731.1    AE014297    AY052386    BT088757    AAF56790.3    AAL13095.1    ACR53994.1    AGB96415.1    AAAB01008987    CM000070    EAL27567.2    CH479179    EDW24981.1    CP012526    ALC46146.1    CVRI01000070    CRL07339.1    CM000160    EDW98416.1    APCN01000900    RSAL01000025    RVE52149.1    OUUW01000005    SPP80283.1    JH431872   
Pfam
PF08205   C2-set_2        + More
PF00047   ig
PF13895   Ig_2
PF07686   V-set
Interpro
IPR036179   Ig-like_dom_sf        + More
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR003598   Ig_sub2       
IPR013162   CD80_C2-set       
IPR013151   Immunoglobulin       
IPR013106   Ig_V-set       
SUPFAM
SSF48726   SSF48726       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 27,         Likelihood:  0.803240
 
 
Length:
153
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
12.61173
Exp number, first 60 AAs:
12.6115
Total prob of N-in:
0.59859
POSSIBLE N-term signal
sequence
outside
1  -  153
 
 

Population Genetic Test Statistics

Pi
208.133155
Theta
160.700201
Tajima's D
0.857929
CLR
0.789461
CSRT
0.617719114044298
Interpretation
Uncertain
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