Gene

KWMTBOMO13183

Annotation

PREDICTED:_rab-like_protein_3_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr22(-):9636536-9640146      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.873

CDS

ATGGCTGCGATTGAGAAAGTGAAGGTTGTGGTCCTCGGTGATTCAGGTGTGGGCAAAACATCTTTAACACATTTGATAGCACACAATAAGCCCATTTTATCGCCGGGATGGACGGTCGGTTGCTCTGTGGAAGTTAAATTACACAAATACAAAGAAGGAACACAAGCCCAAAACACGTTCTTCGTAGAACTTTGGGATGTCGGAGGCTCAAATGGACATAGAAACACAAGAGATGTGTTTTACCAACCAACGCATGGAATCATATTGGTGCACGATTTGACGAACAGAAAAAGTCAAGTGAATCTTCAGAAGTGGCTCGCTGAAATATTGAATCAGGACAGTTCGAATCCAACTTTACAGCATGTAGACGTCGATCCGGAACAGTTCTTAGGTTCCACACAGATTCCGATTTTAGTGATCGGGACTAAATACGACGCTGCGGAGGAAAAACAAAGGAAAAATCAGTATAGAAGACTCGCAAGTAGTATAGCTGAACAATGCGGTGCTGACGAAATATTTGTAACCTGTCATCAGGCAAGATCCCTAGCTCCAGGCTCTACGAATTCAGTGAAATTAACAAGATTTTTTGATAAGGTAATTGAACGTCGATACTATTCGCGAGTTAGTCCATTTTCAGATAAAAGACGTATTCCCCCGTACATCATGGCTACGTCAACTCCTCTTTCTAACAACAGACCATCTCAATATATGAGTCCAAGGTTTTATCATATGGATTAA

Protein

MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDVGGSNGHRNTRDVFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIPILVIGTKYDAAEEKQRKNQYRRLASSIAEQCGADEIFVTCHQARSLAPGSTNSVKLTRFFDKVIERRYYSRVSPFSDKRRIPPYIMATSTPLSNNRPSQYMSPRFYHMD

Uniprot

A0A1E1WTF9   A0A194PYW5   A0A194R651   A0A2H1W041   A0A3S2LQY4   A0A212EVC0   + More
S4PG06   A0A182NK99   A0A182QLV1   A0A2J7RJI5   A0A182V0Y0   A0A182LL88   A0A182RI95   A0A182LZP3   A0A182YR25   A0A182WCD0   A0A182PQ93   A0A182KCC7   A0A1L8DN57   A0A182IS88   H9ISY7   Q7Q5M9   Q16MT3   A0A084WEK3   A0A1Q3FXT8   A0A158NG08   A0A023ENG9   F4X6I3   A0A1Q3FXG7   A0A2M4AJV0   A0A1B6CF27   A0A088AHT6   Q16MT2   A0A2M3Z4H7   A0A026WVL3   E2AHX5   A0A2M4BX95   A0A1Q3G2T8   W5JMG3   E9J5Z9   A0A232FB64   A0A2M4AJT6   K7IUT9   A0A182UAH3   A0A2M4BWW0   A0A0K8TTI6   A0A154PS64   A0A0J7KGR9   E2B2L7   E9HD57   A0A182WTR0   A0A182HI06   A0A182FH79   A0A1B0CWW5   A0A0N8AIU1   A0A067QVI4   A0A0N8DQE9   A0A0P5SPN1   A0A0P5QMI1   A0A195E6X6   A0A0N1ITX1   A0A151ILZ5   A0A195B2A4   A0A1B6JHI2   A0A195F294   A0A1B6G0S0   A0A2M4AK92   A0A2M4AKB0   A0A182GHM6   A0A2M4BXV5   A0A151XBB3   A0A2M4BXV6   A0A3L8DIF2   A0A2M4CRU5   A0A1B0DKV8   T1DT14   A0A0P5E9L5   A0A0L7RIT1   A0A2M4BXJ0   A0A2M4BXQ5   A0A1S3JWL0   R7U424   A0A2M4CQF6   R4FN87   A0A0N8EJ78   U5EWX8   D6WMF0   A0A336LKF2   A0A0A1XPE4   A0A0K8U819   A0A0A9WXC3   A0A0P5G8C5   A0A0K8SJ95   A0A146KNY3   T1IUH3   A0A1W4WYL4   A0A2L2YNN5   A0A0P4YTD9   A0A0A1WMF4   A0A069DPW4  

Pubmed

26354079    22118469    23622113    20966253    25244985    19121390    + More
12364791    14747013    17210077    17510324    24438588    21347285    24945155    26483478    21719571    24508170    20798317    20920257    23761445    21282665    28648823    20075255    26369729    21292972    24845553    30249741    23254933    18362917    19820115    25830018    25401762    26823975    26561354    26334808   

EMBL

GDQN01000739    JAT90315.1    KQ459586    KPI97939.1    KQ460883    KPJ11341.1    + More
ODYU01005529    SOQ46465.1    RSAL01000387    RVE42023.1    AGBW02012225    OWR45411.1    GAIX01006345    JAA86215.1    AXCN02000423    NEVH01002992    PNF40995.1    AXCM01004658    GFDF01006195    JAV07889.1    BABH01013028    AAAB01008960    EAA10808.4    CH477850    EAT35648.1    ATLV01023220    KE525341    KFB48647.1    GFDL01002763    JAV32282.1    ADTU01014874    JXUM01095289    GAPW01003644    KQ564186    JAC09954.1    KXJ72606.1    GL888818    EGI57943.1    GFDL01002761    JAV32284.1    GGFK01007691    MBW41012.1    GEDC01025232    JAS12066.1    EAT35647.1    GGFM01002597    MBW23348.1    KK107109    EZA59119.1    GL439602    EFN66965.1    GGFJ01008483    MBW57624.1    GFDL01000907    JAV34138.1    ADMH02000991    ETN64493.1    GL768221    EFZ11736.1    NNAY01000550    OXU27730.1    GGFK01007729    MBW41050.1    AAZX01002635    GGFJ01008408    MBW57549.1    GDAI01000353    JAI17250.1    KQ435119    KZC14741.1    LBMM01007728    KMQ89477.1    GL445163    EFN90063.1    GL732622    EFX70308.1    APCN01005860    AJWK01032930    GDIP01143209    JAJ80193.1    KK852965    KDR13148.1    GDIP01011055    JAM92660.1    GDIP01142160    LRGB01000944    JAL61554.1    KZS14465.1    GDIQ01118192    JAL33534.1    KQ979568    KYN20938.1    KQ435727    KOX77908.1    KQ977104    KYN05786.1    KQ976662    KYM78603.1    GECU01009089    JAS98617.1    KQ981864    KYN34209.1    GECZ01013778    JAS55991.1    GGFK01007882    MBW41203.1    GGFK01007899    MBW41220.1    JXUM01063938    KQ562274    KXJ76263.1    GGFJ01008749    MBW57890.1    KQ982335    KYQ57588.1    GGFJ01008748    MBW57889.1    QOIP01000008    RLU19982.1    GGFL01003410    MBW67588.1    AJVK01035783    GAMD01001234    JAB00357.1    GDIP01146310    JAJ77092.1    KQ414583    KOC70718.1    GGFJ01008654    MBW57795.1    GGFJ01008653    MBW57794.1    AMQN01010467    KB307921    ELT98421.1    GGFL01003317    MBW67495.1    ACPB03008523    GAHY01000658    JAA76852.1    GDIQ01021444    JAN73293.1    GANO01002772    JAB57099.1    KQ971343    EFA03312.1    UFQS01000038    UFQT01000038    SSW98050.1    SSX18436.1    GBXI01001547    JAD12745.1    GDHF01029804    JAI22510.1    GBHO01031533    JAG12071.1    GDIQ01244818    JAK06907.1    GBRD01012462    JAG53362.1    GDHC01021889    JAP96739.1    JH431533    IAAA01030804    LAA09761.1    GDIP01223796    JAI99605.1    GBXI01014597    JAC99694.1    GBGD01002771    JAC86118.1   

Proteomes

UP000053268    UP000053240    UP000283053    UP000007151    UP000075884    UP000075886    + More
UP000235965    UP000075903    UP000075882    UP000075900    UP000075883    UP000076408    UP000075920    UP000075885    UP000075881    UP000075880    UP000005204    UP000007062    UP000008820    UP000030765    UP000005205    UP000069940    UP000249989    UP000007755    UP000005203    UP000053097    UP000000311    UP000000673    UP000215335    UP000002358    UP000075902    UP000076502    UP000036403    UP000008237    UP000000305    UP000076407    UP000075840    UP000069272    UP000092461    UP000027135    UP000076858    UP000078492    UP000053105    UP000078542    UP000078540    UP000078541    UP000075809    UP000279307    UP000092462    UP000053825    UP000085678    UP000014760    UP000015103    UP000007266    UP000192223   

PRIDE

H9ISY7   

Pfam

PF00071   Ras

Interpro

IPR027417   P-loop_NTPase        + More
IPR001806   Small_GTPase       
IPR005225   Small_GTP-bd_dom       
IPR025662   Sigma_54_int_dom_ATP-bd_1       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

A0A1E1WTF9   A0A194PYW5   A0A194R651   A0A2H1W041   A0A3S2LQY4   A0A212EVC0   + More
S4PG06   A0A182NK99   A0A182QLV1   A0A2J7RJI5   A0A182V0Y0   A0A182LL88   A0A182RI95   A0A182LZP3   A0A182YR25   A0A182WCD0   A0A182PQ93   A0A182KCC7   A0A1L8DN57   A0A182IS88   H9ISY7   Q7Q5M9   Q16MT3   A0A084WEK3   A0A1Q3FXT8   A0A158NG08   A0A023ENG9   F4X6I3   A0A1Q3FXG7   A0A2M4AJV0   A0A1B6CF27   A0A088AHT6   Q16MT2   A0A2M3Z4H7   A0A026WVL3   E2AHX5   A0A2M4BX95   A0A1Q3G2T8   W5JMG3   E9J5Z9   A0A232FB64   A0A2M4AJT6   K7IUT9   A0A182UAH3   A0A2M4BWW0   A0A0K8TTI6   A0A154PS64   A0A0J7KGR9   E2B2L7   E9HD57   A0A182WTR0   A0A182HI06   A0A182FH79   A0A1B0CWW5   A0A0N8AIU1   A0A067QVI4   A0A0N8DQE9   A0A0P5SPN1   A0A0P5QMI1   A0A195E6X6   A0A0N1ITX1   A0A151ILZ5   A0A195B2A4   A0A1B6JHI2   A0A195F294   A0A1B6G0S0   A0A2M4AK92   A0A2M4AKB0   A0A182GHM6   A0A2M4BXV5   A0A151XBB3   A0A2M4BXV6   A0A3L8DIF2   A0A2M4CRU5   A0A1B0DKV8   T1DT14   A0A0P5E9L5   A0A0L7RIT1   A0A2M4BXJ0   A0A2M4BXQ5   A0A1S3JWL0   R7U424   A0A2M4CQF6   R4FN87   A0A0N8EJ78   U5EWX8   D6WMF0   A0A336LKF2   A0A0A1XPE4   A0A0K8U819   A0A0A9WXC3   A0A0P5G8C5   A0A0K8SJ95   A0A146KNY3   T1IUH3   A0A1W4WYL4   A0A2L2YNN5   A0A0P4YTD9   A0A0A1WMF4   A0A069DPW4  

PDB

4PHH     E-value=1.15054e-11,     Score=166

KEGG

101742808    K07933 Rab-like protein 3 | (RefSeq) rab-like protein 3

GO

GO:0003924   GO:0005525   GO:0032482   GO:0005623   GO:0006886   GO:0016021   GO:0007264   GO:0006812   GO:0016887   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

Length:

245

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01567

Exp number, first 60 AAs:

0.01476

Total prob of N-in:

0.12649

outside

1  -  245

 

 

Pi

187.657229

Theta

164.159008

Tajima's D

-0.544256

CLR

0.374271

CSRT

0.230688465576721

Interpretation

Uncertain