Gene

KWMTBOMO13178

Pre Gene Modal

BGIBMGA008820

Annotation

PREDICTED:_blood_vessel_epicardial_substance-like_[Bombyx_mori]

Location

Bomo_Chr22(+):9591947-9601521      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.519 Nuclear   Reliability : 1.202

CDS

ATGTGGGCAGGCGCTGACGTATGCGCACCCGACGTCCTCGCCTGGAGTCTAGCGCTTGTGCTCGTTAATTCTTTACACACAGTCTTCTTAATCATAAGATTTCTTCCGCCGGCGCTTTCCCTGGAACTGACTGACCTGTATTTGAAGCTATTCAAGCCGCTGAAAGTGAACAAGAAACACTTCCAGGAACTCACGCGGGAGGCTCGGATAGTCCGCCTCGAGCCGGGTGAAGCATACGCCGTCGAGGACGTAACACCAGCAGATGAACGACTCTCTATTCTTATAAAGGGAAAACTGCGAGTTAGCTGCGATGAGACGCATCTTCATTACATACAGCCCTATCAGTTTGTCGACTCACCGGAGTGGGAAGCGAACAGAGAGCAATCTGATGACGTATTCCAGGTGACGGTGATCGCAGAGGAGGTGTCCACGTGTGTGTGTTGGCCGCGCATGCGCCTCGAGAGAGTGCTGCGACATCGCCCCGCACTCAAGGTCGTGCTCGACTGCCTCATAGGTAAAGACATTACTCACAAACTATACTCAGTGAGTGAAGGCTTAGGACTGGGTGCGGCGGGCGAACGAGAAGGTACACCGTTGCACCTGACGCGGTCTGCCAGCGTTGACGCGGTGCATGAAGGTGCCCGTGGACGTCTCCGTAGTGCTGCCTGGCGAGCTCGCACCCCCGCACCCAAGGGTCAGTTACAAGGGGCATCGTACTGGCAGCCAGTGGTAGCACGACAGTTTCTCCGACAGTCACCGTTCGGACGACTCAATCAGCCTCCGCGATTGGTCGCACAGTCTTCATCGGCAAGTTTACAAACGCCAGCCCGCAAGCGCAGTCCACCCAGGAGGCCAGCATCGTTGCGGCGCGGACGCGAAGTAAAGTTCGCTGAGATAACGCCGGAGCCGGCCGTGTGA

Protein

MWAGADVCAPDVLAWSLALVLVNSLHTVFLIIRFLPPALSLELTDLYLKLFKPLKVNKKHFQELTREARIVRLEPGEAYAVEDVTPADERLSILIKGKLRVSCDETHLHYIQPYQFVDSPEWEANREQSDDVFQVTVIAEEVSTCVCWPRMRLERVLRHRPALKVVLDCLIGKDITHKLYSVSEGLGLGAAGEREGTPLHLTRSASVDAVHEGARGRLRSAAWRARTPAPKGQLQGASYWQPVVARQFLRQSPFGRLNQPPRLVAQSSSASLQTPARKRSPPRRPASLRRGREVKFAEITPEPAV

Uniprot

A0A2H1W039   A0A212EVC3   A0A194R266   A0A194Q3E7   A0A2J7QPL0   A0A067QYU9   + More
D6WJ44   A0A1W4WTA7   A0A026WPR7   A0A0L7R048   A0A2A3EKS2   A0A195F581   F4WIP7   A0A158NJV6   A0A151XDZ6   A0A195DV22   A0A3L8DNA7   A0A088AKF2   E1ZWW9   A0A195BHN4   A0A154NW12   A0A151I839   T1HCS8   A0A0J7L8L6   A0A0M9A260   A0A0A9XI26   A0A2R7WJE8   E9I8A5   A0A1S4EFX1   E2BWW3   A0A3Q0J0H2   A0A2S2R9Y9   A0A2P8XJX0   J9LZR2   T1IMG3   B7P1K4   A0A087UL63   A0A2L2YSL5   A0A1V9Y2M1  

Pubmed

22118469    26354079    24845553    18362917    19820115    24508170    + More
21719571    21347285    30249741    20798317    25401762    21282665    29403074    26561354    28327890   

EMBL

ODYU01005529    SOQ46469.1    AGBW02012225    OWR45407.1    KQ460883    KPJ11345.1    + More
KQ459586    KPI97935.1    NEVH01012089    PNF30493.1    KK853182    KDR10155.1    KQ971342    EFA03691.1    KK107135    EZA58052.1    KQ414672    KOC64197.1    KZ288217    PBC32413.1    KQ981820    KYN35332.1    GL888176    EGI65983.1    ADTU01018399    ADTU01018400    KQ982254    KYQ58604.1    KQ980304    KYN16760.1    QOIP01000006    RLU21369.1    GL434909    EFN74309.1    KQ976465    KYM84333.1    KQ434769    KZC03761.1    KQ978390    KYM94278.1    ACPB03000042    LBMM01000239    KMR03317.1    KQ435759    KOX75755.1    GBHO01024303    JAG19301.1    KK854932    PTY19764.1    GL761538    EFZ23199.1    GL451188    EFN79827.1    GGMS01017664    MBY86867.1    PYGN01001894    PSN32293.1    ABLF02038846    ABLF02038847    ABLF02038852    ABLF02038854    ABLF02038857    JH431047    ABJB011079231    DS616928    EEC00476.1    KK120357    KFM78102.1    IAAA01049676    LAA11121.1    MNPL01000504    OQR79960.1   

Proteomes

UP000007151    UP000053240    UP000053268    UP000235965    UP000027135    UP000007266    + More
UP000192223    UP000053097    UP000053825    UP000242457    UP000078541    UP000007755    UP000005205    UP000075809    UP000078492    UP000279307    UP000005203    UP000000311    UP000078540    UP000076502    UP000078542    UP000015103    UP000036403    UP000053105    UP000079169    UP000008237    UP000245037    UP000007819    UP000001555    UP000054359    UP000192247   

Pfam

PF04831   Popeye

Interpro

IPR006916   Popeye_prot        + More
IPR018490   cNMP-bd-like       
IPR014710   RmlC-like_jellyroll       

SUPFAM

SSF51206   SSF51206       

Gene 3D

2.60.120.10    

ProteinModelPortal

A0A2H1W039   A0A212EVC3   A0A194R266   A0A194Q3E7   A0A2J7QPL0   A0A067QYU9   + More
D6WJ44   A0A1W4WTA7   A0A026WPR7   A0A0L7R048   A0A2A3EKS2   A0A195F581   F4WIP7   A0A158NJV6   A0A151XDZ6   A0A195DV22   A0A3L8DNA7   A0A088AKF2   E1ZWW9   A0A195BHN4   A0A154NW12   A0A151I839   T1HCS8   A0A0J7L8L6   A0A0M9A260   A0A0A9XI26   A0A2R7WJE8   E9I8A5   A0A1S4EFX1   E2BWW3   A0A3Q0J0H2   A0A2S2R9Y9   A0A2P8XJX0   J9LZR2   T1IMG3   B7P1K4   A0A087UL63   A0A2L2YSL5   A0A1V9Y2M1  

KEGG

101738040    no KO assigned | (RefSeq) blood vessel epicardial substance-like

GO

GO:0016021   GO:0030552   GO:0042383   GO:0016020   GO:0046872   GO:0006812   GO:0016887   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

PANTHER

PTHR12101  

Length:

305

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.80442

Exp number, first 60 AAs:

21.80367

Total prob of N-in:

0.98031

POSSIBLE N-term signal

sequence

inside

1  -  11

TMhelix

12  -  34

outside

35  -  305

 

 

Pi

166.814364

Theta

189.320743

Tajima's D

-0.360955

CLR

2.583993

CSRT

0.271186440677966

Interpretation

Uncertain