SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13175
Pre Gene Modal
BGIBMGA000366
Annotation
PREDICTED:_probable_cation-transporting_ATPase_13A3_[Bombyx_mori]
Full name
Cation-transporting ATPase      
Location in the cell
PlasmaMembrane   Reliability : 4.803
 

Sequence

CDS
ATGCCTTTTTTCAAAAATGATCCTCTCGCCAATGATGAATATGAAGTCATCGGTGAAGCGTTTTGGCAGACCCTGGAAATTCCCGGAGAAGAACAAATTTTAAAAATATATGGCTACAAATATTCGAAGATGCATGCCCTCGTTTTCCACTCTATATGTACAGTATTATGTGGAGTCCCATACATTGCATTGCTGTACTACCCAAAGTACAATCGATTCAAATATGTGAAATGCAGTTTAAAATCAGCAGAAAAGATTTGCGTGACAGATTCAGATGGATTATTTTATTTAGCACAAATAGATGAAATGGATCTCAATCTATCGAATCATAGAGAAAATAAATTAAGATATTTTATTTACCAGCATAATCGTTACATTTGGTTGAGTGATCAAGGTGCCTTTGTTAATGTTCTCGCTCTCAACGAAAAACTAACTATATGTATGTTGATGGAAAATCTAACAGGACTCAACAAGAGACAACAAAATGAATTGCTGAAACTTTATGGTGGAAATAGTGTGGAGGTAAAAGTAATGAGTTACTGGACCATCTTCATCAATGAAGTCTTTAATCCATTCTATTTGTTCCAAGTTTTCTCCATTGTTCTTTGGTCATTGGATGAGTACTATCAATATGCTACTTGTGTGTTCATTTTGTCAACTGCGTCATGTGTAACAGCACTGTGTCAAACAAAACAGATGAGTATCAAAATTCACAAAATGGCTGGTGGTACTAGTGCTTTTACTGTAACGGTTCTGAGACCAACGCGTTCTGGACGTGAAGAATGCGTGGTGAATGCTAGCAGGCTGGTCCCTGGAGATGTATTAGTGATACCATCTGATGGATGTGTAATGCCTTGTGATGCGGTGATTCTGACGGGTTCTTGTATTGTTAACGAGAGTATGCTAACAGGTGAAAGTGTACCAGTTATGAAAGGCCCTCCGTGTTTGTCATCTGAAGTGTATTCTACAGAAGTTCATAAACGACATACACTCTATGCTGGCACTCATGTGATACAAACCAGATTTTATGGTAATAACCAGGTTTTAGCTAAAGTCGTAAGGACCGGATTTTACACAGCTAAAGGAGAGCTTATAAAAAGCATACTGTATCCAAAAGAGGTCAATTTCCAGTTCTACGACGACGCCGTTAGATTCGTAACATTCATGTTCTCCATTGCTGCGCTTGGCATGGCTTACTCCGTCTGGTTATACGTCCTGCGAGGGAGCTCCGTCAGTACGATAATGCTCCGTACATTGGACATTATAACCATAGTGGTACCGCCTGCACTACCCGCGGCCATGACAGCCGGCGTAGTTTACAGCCAACGCCGCTTAAGGAAAAACAAAATATTCTGCGTCTCACCGCCGAGGATCGTGATTTGCGGGAAATTACAAGTCATGTGCTTTGATAAGACTGGTACTTTAACTGAAGACGGCTTAGACTTCTATTCGGTAATTCCTTCAAATGAGGGCGAGAAATTCGGGAAACAAGTGGTGAATGTGACGGGGCTGCCGGCTACGAGTCCTCTACTGCAGGCCCTGGCTTCGTGTCATTCCTTGACCAGCATCCAAGGCGAGCTTAAAGGAGATCCGCTTGATTTGAAAATGTTTGAGTTTACACGATGGGTACTGGAGGAGCCCGGCCCAGAGAACACGCGGTATGACAACCTAACACCGTCTATAGTTAAACCCGTATCGCCAACGGAGAGCACACAGAATCTTGACAATTATGACCCTTACACAATGGAAATTCCGTATGAGATTGGTCTTCTAAGGAGGTTTCACTTTTCTTCATCCCAACAATCTATGGGAGTTATCGCCCGAGTGCTTGGACAACCACAAATGGTGTATTTTGTTAAAGGAGCGCCCGAGAAGATCTCCGGCATGTGCGCCCCGGAAACCCTGCCGGAAAACTTCAGCACAGTACTTAACGAATACACATCGAACGGCTTCCGCGTGATCGGTCTCGCTCACAAGAAGCTTGACCGTAAAATGAAATGGGTCGACGCCCAGAGAATCAAAAGAGATACCCTCGAATGCGATATGGTCTTCCTAGGCTTCCTAGTCATGCAAAATAGCCTGAAAACCGAAACTACCCAGATCATAAGAGAGCTACACATGGCCAACATGAGGCTGGTCATGGTCACAGGAGATAACATCATGACGGCTATGTCAGTGGCCCGCGGATGCTTCATGGTGCAACCGCAACAGAAGATAGTGTTGATAACTGCAGTGCCACAAGCGAACGACGCTCAACCTCCACTCACCATGGAAGTCGTCGGAGAGAGCGGACCACCAAAGTTACCGATGGATTCTTATGTCATAGCTTTGGAAGGGAAGACTTGGCAAGCAATACGAACGTACTATCCAGATTTAATGCCGACTGTATTGAAAAAAGGTATGGTGTTCGGTCGCTTCGGTCCGGACCAGAAGACGCAGCTGATAACCGCGCTGCAGGACGAGGAGCTGACGGTGGGCATGTGCGGGGACGGCGCCAACGACTGCGGCGCCCTCAAAGCCGCGCACGTCGGGATATCGCTCTCCGAAGCCGACGCTTCCGTGGCGGCACCGTTCACTTCTCAAGAGCAAAACATCACATGCGTCAAACTGCTAGTTCTAGAGGGACGTTGTGCACTCAGCACTTCATTCGCAATATTTAAATATATGGCTCTGTATTCGCTGATACAGTTCTTCTCAATTCTTATTCTATACAAGCACCATTCGACCCTGGGCAACAATCAGTTCCTGTACATCGACCTGGTGCTGACGACGCTGCTGGCGCTGTCCCTGGGCCGCGCATGTCCGGGCCCGCGCCTCACGGCCGCGCTGCCGCCCGTGTCGCTGGTGTCGCCCGTCAGCCTGGCGCAGCTGCTGCTGCAGGTGCTCCTCGTGCTCATGGTCCAGATCTCGGCCATCTACGTGCTCCACGGCCAACCTTGGTTCAAATCCATCGAAGGTGGACCGAACATAGAAAATATAATGTGCTGGGACAACACAGTAATATTCATCACGACCTCGTTTCAGTACTTGATCATGGCCTGTGTTTACGCCAACGGCTGGCCGTTCCGAGACCGCTTTTACGCTAACTATTCGATGGTGCTATCGCTGGTGACGCAAACCTCATTCGTGATACTGCTGTTGATGTGCCCCTGGTCGTGGCTCGCGCATTTCATGGACATCAAAATGTTGGACCCCACAGATCCGGACCAAAAAACTTTCCGTACTTATCTGATGTTGATACCTTTCATACATCTGATCTTGGCTTTTACTATAGAAATGACGTTGTCGAATTCAGAAAAATTCTCGAAGCTGTCGAAGTTGATCCGGAGACGGTGCCGGGACAAGGAGGACGCGTCAGTGGAAGGCGCGTGTCCGCTGTGGGCGCCGCCTGCGCACGTGTGCTGA
Protein
MPFFKNDPLANDEYEVIGEAFWQTLEIPGEEQILKIYGYKYSKMHALVFHSICTVLCGVPYIALLYYPKYNRFKYVKCSLKSAEKICVTDSDGLFYLAQIDEMDLNLSNHRENKLRYFIYQHNRYIWLSDQGAFVNVLALNEKLTICMLMENLTGLNKRQQNELLKLYGGNSVEVKVMSYWTIFINEVFNPFYLFQVFSIVLWSLDEYYQYATCVFILSTASCVTALCQTKQMSIKIHKMAGGTSAFTVTVLRPTRSGREECVVNASRLVPGDVLVIPSDGCVMPCDAVILTGSCIVNESMLTGESVPVMKGPPCLSSEVYSTEVHKRHTLYAGTHVIQTRFYGNNQVLAKVVRTGFYTAKGELIKSILYPKEVNFQFYDDAVRFVTFMFSIAALGMAYSVWLYVLRGSSVSTIMLRTLDIITIVVPPALPAAMTAGVVYSQRRLRKNKIFCVSPPRIVICGKLQVMCFDKTGTLTEDGLDFYSVIPSNEGEKFGKQVVNVTGLPATSPLLQALASCHSLTSIQGELKGDPLDLKMFEFTRWVLEEPGPENTRYDNLTPSIVKPVSPTESTQNLDNYDPYTMEIPYEIGLLRRFHFSSSQQSMGVIARVLGQPQMVYFVKGAPEKISGMCAPETLPENFSTVLNEYTSNGFRVIGLAHKKLDRKMKWVDAQRIKRDTLECDMVFLGFLVMQNSLKTETTQIIRELHMANMRLVMVTGDNIMTAMSVARGCFMVQPQQKIVLITAVPQANDAQPPLTMEVVGESGPPKLPMDSYVIALEGKTWQAIRTYYPDLMPTVLKKGMVFGRFGPDQKTQLITALQDEELTVGMCGDGANDCGALKAAHVGISLSEADASVAAPFTSQEQNITCVKLLVLEGRCALSTSFAIFKYMALYSLIQFFSILILYKHHSTLGNNQFLYIDLVLTTLLALSLGRACPGPRLTAALPPVSLVSPVSLAQLLLQVLLVLMVQISAIYVLHGQPWFKSIEGGPNIENIMCWDNTVIFITTSFQYLIMACVYANGWPFRDRFYANYSMVLSLVTQTSFVILLLMCPWSWLAHFMDIKMLDPTDPDQKTFRTYLMLIPFIHLILAFTIEMTLSNSEKFSKLSKLIRRRCRDKEDASVEGACPLWAPPAHVC

Summary

Similarity
Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
Feature
chain  Cation-transporting ATPase
EC Number
3.6.3.-
EMBL
BABH01013034    BABH01013035    ODYU01003023    SOQ41266.1    AGBW02012225    OWR45405.1    + More
KQ459586    KPI97933.1    KQ460883    KPJ11347.1    NEVH01027130    PNF13620.1    KQ971338    KYB27756.1    GEZM01001379    JAV97914.1    GDRN01101414    JAI58382.1    GECU01032284    GECU01001829    JAS75422.1    JAT05878.1    KK117826    KFM71494.1    GDKW01001599    JAI54996.1    GBBI01003605    JAC15107.1    GECU01028811    GECU01025542    GECU01019835    JAS78895.1    JAS82164.1    JAS87871.1    PZQS01000002    PVD36977.1    NEDP02004099    OWF46704.1    GECZ01031716    GECZ01013366    JAS38053.1    JAS56403.1    GFTR01008558    JAW07868.1    GEBQ01009826    JAT30151.1    JH817540    EKC41107.1    GBHO01035891    JAG07713.1    GEZM01001381    JAV97906.1    GDHC01021310    JAP97318.1    GEFM01005864    JAP69932.1    GBHO01035893    GDHC01011867    JAG07711.1    JAQ06762.1    GFXV01003690    MBW15495.1    ABLF02033530    ABLF02033534    ABLF02040091    ABLF02040104    ABLF02040105    ABLF02040112    ABLF02040113    ABLF02053377    ABLF02055581    ABLF02063237    GEBQ01030332    JAT09645.1    GGMS01000310    MBY69513.1    LSMT01000029    PFX31918.1    CAEY01001357    AFYH01072371    AFYH01072372    AFYH01072373    AFYH01072374    AFYH01072375    GABZ01003832    JAA49693.1    ADON01026100    ADON01026101    GABZ01003778    JAA49747.1    AKCR02000044    PKK24002.1    AFYH01105219    AFYH01105220    AFYH01105221    AFYH01105222    AFYH01105223    AFYH01105224    AADN05000197    AKHW03006061    KYO24581.1    JXLN01010091    KPM05094.1    GGLE01001640    MBY05766.1    GEDV01005477    JAP83080.1    GFPF01006595    MAA17741.1    GEDV01012295    JAP76262.1    HADW01002492    SBP03892.1    GACK01006912    JAA58122.1    NHOQ01002824    PWA14538.1    GACK01010043    JAA54991.1    GACK01002345    JAA62689.1    AERX01037043    NEDP02005415    OWF41249.1    KK699335    KFQ26291.1    GEBF01003806    JAN99826.1    KK501618    KFP16712.1    GFFW01000091    JAV44697.1    GBRD01004257    GBRD01004256    JAG61565.1    GFAC01002690    JAT96498.1   
Pfam
PF12409   P5-ATPase        + More
PF00690   Cation_ATPase_N
PF00689   Cation_ATPase_C
PF05507   MAGP
Interpro
IPR004014   ATPase_P-typ_cation-transptr_N        + More
IPR018303   ATPase_P-typ_P_site       
IPR023214   HAD_sf       
IPR036412   HAD-like_sf       
IPR023299   ATPase_P-typ_cyto_dom_N       
IPR006544   P-type_TPase_V       
IPR023298   ATPase_P-typ_TM_dom_sf       
IPR008250   ATPase_P-typ_transduc_dom_A_sf       
IPR001757   P_typ_ATPase       
IPR006068   ATPase_P-typ_cation-transptr_C       
IPR008673   MAGP       
IPR003582   ShKT_dom       
SUPFAM
SSF81653   SSF81653        + More
SSF56784   SSF56784       
SSF81665   SSF81665       
SSF81660   SSF81660       
Gene 3D
PDB
5AW9     E-value=6.47203e-21,     Score=253

Ontologies

Topology

Subcellular location
Membrane  
Length:
1134
Number of predicted TMHs:
11
Exp number of AAs in TMHs:
237.2415
Exp number, first 60 AAs:
15.11079
Total prob of N-in:
0.00298
POSSIBLE N-term signal
sequence
outside
1  -  45
TMhelix
46  -  68
inside
69  -  180
TMhelix
181  -  203
outside
204  -  207
TMhelix
208  -  230
inside
231  -  381
TMhelix
382  -  404
outside
405  -  418
TMhelix
419  -  441
inside
442  -  881
TMhelix
882  -  904
outside
905  -  913
TMhelix
914  -  931
inside
932  -  951
TMhelix
952  -  974
outside
975  -  997
TMhelix
998  -  1020
inside
1021  -  1032
TMhelix
1033  -  1055
outside
1056  -  1074
TMhelix
1075  -  1097
inside
1098  -  1134
 
 

Population Genetic Test Statistics

Pi
269.400892
Theta
193.838765
Tajima's D
1.339338
CLR
0.004502
CSRT
0.749362531873406
Interpretation
Uncertain
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