Gene

KWMTBOMO13174

Pre Gene Modal

BGIBMGA000352

Annotation

PREDICTED:_sodium_channel_protein_Nach-like_[Bombyx_mori]

Location

Bomo_Chr22(+):9518183-9524207      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.243

CDS

ATGAAAGTTTATCCAGAGAATAAAGTAAAACATGGACGTAAAAGTAATAGAAAAATTGAGAGAAACGAGGAGGTCAACGGCATATCACTGTTTGCTGCTAGTCTACGACATCAAACAACTGAATTCTTCAATAATTCAACACTACACGGGGTTAGATATATCGCAGAAAAAGACAGACCGTTTTGTGAAAAGTTTATGTGGTTCAGTTTTACTGCCATAGGAGCAGTAACGACTTGTATTATTATCGTAAGCTTATGGGAAAAGTTTCAAACCAATCCAACGATTACAGGTCTCGATACGGATTTTCACAATTGGGATGTTCCTTTTCCAGCTGTGACAATATGTGATGCTAGTCCTGTCGATGATGAATTACTGCAAGAGTATATCGAAAGTGTTTGGGGCTCCGATCCTCCGGAACGAGCTGCCGAAATGCTGCAATGGCTGGCCACATTGAGCTATAGTTCTATAGCAGAACATGCCGCTGAATACTTAGCGGAGCCGGGACTTGTAGGCGAAAATGAAAACAATGTGCCGGAACCCGCTAGAGATTCGAAAGAAGCCGTATTTAAAGTTGTGCGACATTGCGAAACATTATTCTACGACTGCGTGTGGAAAGGAGATTCCGAAGAGTGTTGCGATTTGCTCATACCTGTATTCACGGAAATGGGCTTTTGTTATGCTTTTAATTCAAGACACGCGGAGAAAATTTGGCCCTGGCAGTCGCAAGCACAACAAGAACAGTTTATAGAGGCATTTATTCACGAAACTGACGCAAAATGGTCATTTATGTTTAATTCGGACCGCAAAAATACGACGTTCGACATCTATATACATTCGACTGAAGAAATGGCTGGTTTAGAACAAAGCGCTCAGCACTCATGGGACTATCGCGTCGAAAAGGTTTCATTTTCCGTCAAGCATACCTATACAACTGACGATGCTCGCCAATTGTCAATCCGTCAAAGGCGTTGCGTATTCGCTGATGAATTGCACCTGGATACATCGAATATCTACACCTATTCAGCTTGCATGAGACAATGTCGTATGCGAAGAAGTCGTTCGTTTTGTAAATGCGTGCCTCATTTTTATCCAACTATAAAGGGATACAAGCAATGTACATTGCGGGAGCTGGAATGCATAGCGAAACACGCAAGCGCTATTACAGATGTGACTAAATGCTCATGTGAGCTGGGCTGTTCCCACACCGTTTACGAAGTTGAAAAATTATCTGAAACTGATGCTACGAGAGGGGGCGAAAGCAATTCTTTGGAGACGGAATTTGTATCGTGGCCGATGGTGCGCTATAAGCGCGAAGTGCTCTTTGGATGGGTGGACCTTTTAGTATCTTTCGGGGGGATCGCTGGTTTGTTCCTCGGTTTCTCGCTGTTGTCCGGGGTCGAGTTGCTGTACTACTTCACGCTAAGGGCGTGTTGCGCAGCGGTACGTGACGCCGACCAGCTGCGAAGAGAACGAGCCGAAAGACTAGCGCAGCCGAAACCGCCACACAATCTTAGTTTGATACCTTGGTGGAAAGAACCGCCTATACCCGGAAGCGTACGCCCGATTCTTGTTCGTGCAAAGGATTCCATGCCGCCGCAGTACTCTCCTCCGCCGGGTTACACGACATATTTACCGTAA

Protein

MKVYPENKVKHGRKSNRKIERNEEVNGISLFAASLRHQTTEFFNNSTLHGVRYIAEKDRPFCEKFMWFSFTAIGAVTTCIIIVSLWEKFQTNPTITGLDTDFHNWDVPFPAVTICDASPVDDELLQEYIESVWGSDPPERAAEMLQWLATLSYSSIAEHAAEYLAEPGLVGENENNVPEPARDSKEAVFKVVRHCETLFYDCVWKGDSEECCDLLIPVFTEMGFCYAFNSRHAEKIWPWQSQAQQEQFIEAFIHETDAKWSFMFNSDRKNTTFDIYIHSTEEMAGLEQSAQHSWDYRVEKVSFSVKHTYTTDDARQLSIRQRRCVFADELHLDTSNIYTYSACMRQCRMRRSRSFCKCVPHFYPTIKGYKQCTLRELECIAKHASAITDVTKCSCELGCSHTVYEVEKLSETDATRGGESNSLETEFVSWPMVRYKREVLFGWVDLLVSFGGIAGLFLGFSLLSGVELLYYFTLRACCAAVRDADQLRRERAERLAQPKPPHNLSLIPWWKEPPIPGSVRPILVRAKDSMPPQYSPPPGYTTYLP

Similarity

Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.

Uniprot

H9ISX4   A0A2H1VKC3   A0A194R0M7   A0A212EVC7   A0A2A4IX25   A0A3S2THN1   + More
A0A194PX82   D6X1W4   J9K6J9   A0A0T6BIH2   A0A2J7QRU2   B0XDQ2   A0A1W4XKA4   A0A1W4XAQ5   A0A182RMU6   T1H7W7   A0A1S4G155   A0A1I8N4R5   Q16HJ0   A0A182W5E8   A0A182QA18   A0A182LZP0   A0A182UEI0   A0A182LDE6   A0A182N1I6   A0A182WZ69   A0A182J395   A0A182HMN8   A0A084VQ84   A0A1W4VVK3   A0A1J1HTN2   B4L2P1   A0A182PWD2   B3NWV1   A0A182HBG9   A0A1B0D225   B4MSE4   A0A182VKG8   B4Q2H6   A0A0L0C8E2   A0A0M4EKC4   B4IF21   Q29I68   B4M1E1   A0A3B0JXR9   B4JKS3   A0A182FJW5   B3MW22   M9PHF4   F8QU26   W5JWM5   A0A034WUX9   A0A0A1WJY5   Q9VX46   Q86LG2   Q7Q4W6   A8JV41   Q86LG3   A0A2P8Y3U5   A0A1B0A345   A0A1I8QAH1   A0A1I8QAM1   A0A1S4G0K6   Q16HJ1   A0A182GTT6   A0A1I8P581   A0A182GTT7   B0XDP8   N6UT51   A0A1B0C102   T1GFM0   A0A336MSG0   A0A1A9YDV1   A0A1J1HUH6   A0A2J7PQL0   A0A2A4J8F9   A0A1Y1KQV7   A0A2H1VM38   A0A0N0PBY3  

Pubmed

19121390    26354079    22118469    18362917    19820115    25315136    + More
17510324    20966253    24438588    17994087    26483478    17550304    26108605    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    20920257    23761445    25348373    25830018    12571352    12364791    14747013    17210077    26109357    26109356    29403074    23537049    28004739   

EMBL

BABH01013035    ODYU01003023    SOQ41265.1    KQ460883    KPJ11348.1    AGBW02012225    + More
OWR45404.1    NWSH01006083    PCG63680.1    RSAL01000133    RVE46312.1    KQ459586    KPI97932.1    KQ971371    EFA10172.2    ABLF02031579    ABLF02031581    LJIG01000245    KRT86695.1    NEVH01011884    PNF31312.1    DS232771    EDS45560.1    ACPB03000915    CH478166    EAT33715.1    AXCN02001441    AXCM01000689    APCN01004851    ATLV01015146    KE525003    KFB40128.1    CVRI01000020    CRK90740.1    CH933810    EDW07839.1    CH954180    EDV46498.2    JXUM01124859    KQ566878    KXJ69763.1    AJVK01002609    CH963851    EDW75033.2    CM000162    EDX02617.2    JRES01000866    KNC27674.1    CP012528    ALC49816.1    CH480832    EDW46275.1    CH379063    EAL32785.3    CH940651    EDW65495.2    OUUW01000003    SPP78156.1    CH916370    EDW00176.1    CH902625    EDV35167.2    AE014298    AGB95488.1    HM026485    ADL60138.1    ADMH02000129    ETN67660.1    GAKP01001369    JAC57583.1    GBXI01015120    JAC99171.1    AAF48734.2    AY226551    AAO47377.1    AAAB01008963    EAA12066.4    ABW09441.1    AY226550    AAO47376.1    AAX52503.1    PYGN01000958    PSN38910.1    EAT33714.1    JXUM01087964    KQ563670    KXJ73510.1    KXJ73511.1    EDS45556.1    APGK01017131    APGK01017132    APGK01017133    APGK01017134    KB739998    ENN81927.1    JXJN01023841    JXJN01023842    CAQQ02166493    CAQQ02166494    CAQQ02166495    UFQT01002091    SSX32635.1    CRK91020.1    NEVH01022635    PNF18623.1    NWSH01002500    PCG68149.1    GEZM01080733    JAV62065.1    ODYU01003291    SOQ41856.1    KQ460864    KPJ11815.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000218220    UP000283053    UP000053268    + More
UP000007266    UP000007819    UP000235965    UP000002320    UP000192223    UP000075900    UP000015103    UP000095301    UP000008820    UP000075920    UP000075886    UP000075883    UP000075902    UP000075882    UP000075884    UP000076407    UP000075880    UP000075840    UP000030765    UP000192221    UP000183832    UP000009192    UP000075885    UP000008711    UP000069940    UP000249989    UP000092462    UP000007798    UP000075903    UP000002282    UP000037069    UP000092553    UP000001292    UP000001819    UP000008792    UP000268350    UP000001070    UP000069272    UP000007801    UP000000803    UP000000673    UP000007062    UP000245037    UP000092445    UP000095300    UP000019118    UP000092460    UP000015102    UP000092443   

PRIDE

H9ISX4    Q9VX46    Q86LG2    Q86LG3   

Pfam

PF00858   ASC        + More
PF05186   Dpy-30

Interpro

IPR001873   ENaC        + More
IPR007858   Dpy-30_motif       
IPR027417   P-loop_NTPase       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

H9ISX4   A0A2H1VKC3   A0A194R0M7   A0A212EVC7   A0A2A4IX25   A0A3S2THN1   + More
A0A194PX82   D6X1W4   J9K6J9   A0A0T6BIH2   A0A2J7QRU2   B0XDQ2   A0A1W4XKA4   A0A1W4XAQ5   A0A182RMU6   T1H7W7   A0A1S4G155   A0A1I8N4R5   Q16HJ0   A0A182W5E8   A0A182QA18   A0A182LZP0   A0A182UEI0   A0A182LDE6   A0A182N1I6   A0A182WZ69   A0A182J395   A0A182HMN8   A0A084VQ84   A0A1W4VVK3   A0A1J1HTN2   B4L2P1   A0A182PWD2   B3NWV1   A0A182HBG9   A0A1B0D225   B4MSE4   A0A182VKG8   B4Q2H6   A0A0L0C8E2   A0A0M4EKC4   B4IF21   Q29I68   B4M1E1   A0A3B0JXR9   B4JKS3   A0A182FJW5   B3MW22   M9PHF4   F8QU26   W5JWM5   A0A034WUX9   A0A0A1WJY5   Q9VX46   Q86LG2   Q7Q4W6   A8JV41   Q86LG3   A0A2P8Y3U5   A0A1B0A345   A0A1I8QAH1   A0A1I8QAM1   A0A1S4G0K6   Q16HJ1   A0A182GTT6   A0A1I8P581   A0A182GTT7   B0XDP8   N6UT51   A0A1B0C102   T1GFM0   A0A336MSG0   A0A1A9YDV1   A0A1J1HUH6   A0A2J7PQL0   A0A2A4J8F9   A0A1Y1KQV7   A0A2H1VM38   A0A0N0PBY3  

KEGG

101737967    K03440 acid-sensing ion channel, other | (RefSeq) sodium channel protein Nach-like

GO

GO:0016021   GO:0005272   GO:0004017   GO:0005524   GO:0004127   GO:0019236   GO:0008049   GO:0006814   GO:0016020   GO:0005856   GO:0000166   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

PANTHER

PTHR11690  

Length:

545

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

44.90005

Exp number, first 60 AAs:

0.01362

Total prob of N-in:

0.74408

inside

1  -  64

TMhelix

65  -  87

outside

88  -  449

TMhelix

450  -  472

inside

473  -  545

 

 

Pi

217.967379

Theta

163.974227

Tajima's D

0.335086

CLR

1.118156

CSRT

0.466026698665067

Interpretation

Uncertain