SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13167  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000348
Annotation
PREDICTED:_uncharacterized_protein_LOC101738360_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.721 Nuclear   Reliability : 2.121
 

Sequence

CDS
ATGCTTAGACAAGAACTTCTAGTGTTGGTATTTGCCTGCAGTTCACTAGCGGCGTTAGACGGCTACAGTCCCCAACAAGACCCCGATCAGTTCCACATACAAACAGATGACGAGGACGAGCGCTACTTCCTCTACCAAACTCACAATGGACAGTATCGTAAAGAAAGGAGGTTAAAAGATGGATCCGTAGTTGGCACAACGGGCTGGGTTGGCGCAGATGGATTTCTACGCTTACAAGATTACATAGCTGACGACCAGGGTTATAGAATATACAAATCCAAAACTGTATATGTTGGACAAAACCGACCGATAAGTGAGTCCTTGAATATAGCGAAAACCGCGCCCACAGACTCGGGATATGGAGTGACACGAGCGCCCGCCGTACAACGTAATCGAGGGCCACCTCGATTCACATCTACGACACATTCACCACTACCTTCTTCCACTATAGAACCACCGCACTTCTCCTCCTCAGATGTCACAATTACACCAGCCCCACCTACATTTTCCCATCCGAGCTCAACTCCACGAGTATTTGTATCACCAAACTCTATTGATTCTTCTACAGCTTATGATTACAGACCTACTGTAACATCAGTGACCGACAGAGACGCTACAACACCAAATCCTTATGCCTACGAGCCCCCGAATACCAATTCACTTGACGACGGGTATTATGCGAGCGACAGTCAAAGATATGACGTATTTAATCCTAATTCGTATAGACATGCCGATGATTGGTTGCGGCGGCAGCGACCAACCGCCGAAATAGGAGACGGCTATACTCCACAATTCTCAACATACGATGGTGCGCCGTTCAGAAGAAACGGTTTCAGATATTATCTTCCAAAGCAGTACCACGAGGAAAACACGGGAGATGTTAACGATAGAATAGGCAGCTTCGGTTATGTAGATCCTTTTGGTATTCGACGAGTTATTTATTACAATACCGCTCCCGGGGACGGTTTTCAGATAAGAAAAAACAATAGATATGTCGGACACGACGCAACTCCTTACGATCCACGACCGATTGCTAAAAAATAG
Protein
MLRQELLVLVFACSSLAALDGYSPQQDPDQFHIQTDDEDERYFLYQTHNGQYRKERRLKDGSVVGTTGWVGADGFLRLQDYIADDQGYRIYKSKTVYVGQNRPISESLNIAKTAPTDSGYGVTRAPAVQRNRGPPRFTSTTHSPLPSSTIEPPHFSSSDVTITPAPPTFSHPSSTPRVFVSPNSIDSSTAYDYRPTVTSVTDRDATTPNPYAYEPPNTNSLDDGYYASDSQRYDVFNPNSYRHADDWLRRQRPTAEIGDGYTPQFSTYDGAPFRRNGFRYYLPKQYHEENTGDVNDRIGSFGYVDPFGIRRVIYYNTAPGDGFQIRKNNRYVGHDATPYDPRPIAKK

Summary

Pfam
PF00379   Chitin_bind_4
Interpro
IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.946559
 
 
Length:
347
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.23187
Exp number, first 60 AAs:
0.22888
Total prob of N-in:
0.01633
outside
1  -  347
 
 

Population Genetic Test Statistics

Pi
226.35861
Theta
171.487575
Tajima's D
0.802371
CLR
0.135976
CSRT
0.605019749012549
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28467696 QRPGSEYGEMIEEK 100.00 2e-10
26280517 VIVTGIPPSGSWQDIKDHMR 100.00 3e-04
28467696 VIYYAKDFDVFMR 100.00 3e-04
26280517 IGEHSGYPSAQDIIIEGAR 100.00 0.014
24402669 IGSAGSGIYSGR 100.00 0.014
28467696 IGSENTCTEQYFPIEGAGIDIR 100.00 0.014
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