Silkworm Genome Informatics Database

Gene

KWMTBOMO13166 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000347

Annotation

PREDICTED:_protein_lethal(3)malignant_blood_neoplasm_1_[Bombyx_mori]

Location

Bomo_Chr22(+):9421183-9431720 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.993

CDS

ATGGATCTACTCAGAAAGATTAATATTATTGTGGTGATTACTACATGCATATTACTCCAAGCAGAAGGAGCCGACAAATATACTGATGAGAAAAGACCGTACGAATTCGGTTTCACGATTGACGGGCAGCAGCATAGACACGAAAAGAAAGATAAGAACGGCATTATCATGGGAGAGTTCGGATTCATCACTGCCGATGATGTATATCATGTGACAGTGTACGCTACTGACGAAAATGGAAGATTCAAAATAATTTCTATGAAGAACATACATTTGAAATCACAATCGACATCGCAAAGACAGGGTCACTCGTTGCAAATACCGAACACACAAAACGCTATAGCGTCAACTCAATCGCCCACCCAAAAACCAGAAAACACCCTCAAATCTATATCTATAGAACCACCAGCTAAATCCTGTTCGCATTGCAGTCTGCCGACAACTTCTACAGTTGCTCCGGCATCTGCTAAACCAGCATTTATCAATGGTGGAATTGGCGGCACAAAATCGGACGTACAAAATAATCAAGTGCCAACTTACAATGTAAAACAAAACAATGCTGATTCACAATACCCTCAACAAGGAGATTTCAAAAACTTCCCAGGTCAACAACTCAATCCTCAAAATGTAGGAAACCAACAAACTCCTGACGTACAAAATAGCCGTACAAATCAAAATAATAAACAAACACAAGGGGCTTCTGGAAGCTTCCTACCACTGAGTGGTAGTGGAGGCTCTCAAAATGGTTTTAAGCAAACCCCTGTCCAAGCCCTGTCTACAATAGCGAACCAAGGTGGAGACAATCCAGAATACCCAACTGGACTAAGGAATAGCTTTGATTCTCCACAAGGACAACAAAATGAATTCGGTGCTCCACAGAGACAACAAAACAGCTTTGGTGCACCACAAGGAAATCAAAATGGATTCGGTGCTCCACATGCTGCCGCTGAAGGCTTAGGAACTTCCAAGGGATCATCTGATAGTAATATTTTCAACAACCAAAATTCAAAAACACCTAATTCATTTAATCAGGGCTCGGATGAACAAAGAGGAACACGTGATGAACAAACGGGTAGCAACGCTGGCGGTACAGCTAATGAAAGAATTAATAGTATTAACGCAGGTCAAACTACTACTGGGGCTGTTGCAGGATCTCGTTCACCTAAGCTGTACAATGTAAAACCAGATCAATCTTCCAATGGCCTGAGCCCAAGAGAACAGTCTCGATTCGGACAAGCCAGTGGCAATAAAATTAGACCAGAAAATGGTCAATCTAACAACGAGAAACCGACATTGACATACGCTCAAATCCAAATTGTTGATAAGAATACTGACATTCACTCCAAACGCCCTGGAGAAAAAGACGGATTACCTAACGGTATTACCGAAAACGACATGGTTCATCTTCTTTATACGTTCAATTACACTTTAGGTTTTCAAGCACATTTTGAAGAAGGATACTCGAACGGCGTCAAACAAGGATACTATTACGTTACAGGACGAAATGGAATCAGAACAAGGATCGATTACATAGCAGACGATAAAGGCTTTAGACCTAAAATATCCCAAGAGGTGCTTGATTTACTGTCTGAAGATGTGCCGAAACCTGAAACAGAAAAAGACGAAAAATACGGTCTGAAGGGCTATGAATTTAAATGGTTATATTATCCTCTCGAGTCTAAAGCGCGGTAG

Protein

MDLLRKINIIVVITTCILLQAEGADKYTDEKRPYEFGFTIDGQQHRHEKKDKNGIIMGEFGFITADDVYHVTVYATDENGRFKIISMKNIHLKSQSTSQRQGHSLQIPNTQNAIASTQSPTQKPENTLKSISIEPPAKSCSHCSLPTTSTVAPASAKPAFINGGIGGTKSDVQNNQVPTYNVKQNNADSQYPQQGDFKNFPGQQLNPQNVGNQQTPDVQNSRTNQNNKQTQGASGSFLPLSGSGGSQNGFKQTPVQALSTIANQGGDNPEYPTGLRNSFDSPQGQQNEFGAPQRQQNSFGAPQGNQNGFGAPHAAAEGLGTSKGSSDSNIFNNQNSKTPNSFNQGSDEQRGTRDEQTGSNAGGTANERINSINAGQTTTGAVAGSRSPKLYNVKPDQSSNGLSPREQSRFGQASGNKIRPENGQSNNEKPTLTYAQIQIVDKNTDIHSKRPGEKDGLPNGITENDMVHLLYTFNYTLGFQAHFEEGYSNGVKQGYYYVTGRNGIRTRIDYIADDKGFRPKISQEVLDLLSEDVPKPETEKDEKYGLKGYEFKWLYYPLESKAR

Uniprot

C0H6L3 A0A2P8YAI0 A0A1W4W915

Pubmed

19121390 19280704 29403074

EMBL

BABH01013040 BR000523 FAA00524.1 PYGN01000754 PSN41268.1

Proteomes

UP000005204 UP000245037 UP000192223

PRIDE

C0H6L3

Pfam

PF00379 Chitin_bind_4

Interpro

IPR031311 CHIT_BIND_RR_consensus + More
IPR000618 Insect_cuticle

ProteinModelPortal

C0H6L3 A0A2P8YAI0 A0A1W4W915

KEGG

101743800 no KO assigned | (RefSeq) protein lethal(3)malignant blood neoplasm 1

GO

GO:0042302 GO:0008270 GO:0006260 GO:0003824 GO:0005634 GO:0005737 GO:0048869 GO:0003676 GO:0016491 GO:0015930

SignalP

Position: 1 - 23, Likelihood: 0.953077

Length:

563

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.10895

Exp number, first 60 AAs:

2.0738

Total prob of N-in:

0.11802

outside

1 - 563

Pi

230.172571

Theta

189.079828

Tajima's D

0.957758

CLR

0

CSRT

0.645767711614419

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
28467696	NFPDGDKIYNFDFK	95.83	4e-09
28467696	NSETGICEDINECVQHGR	100.00	8e-06
28467696	INSIINSTGWGIADAIR	100.00	1e-04
28467696	QNMVIEEPR	100.00	0.001
28467696	SDVATNAVVK	100.00	0.011
28467696	TPNNPAPNAYSPEK	100.00	0.026

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics