Gene

KWMTBOMO13165  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000346

Annotation

cuticular_protein_RR-1_motif_23_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):9399043-9401971      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.64

CDS

ATGCTTAAATACGTGACAGTCGCTTGCGTGCTGGTAGCCCTTTGCTCAGGTGCTCCACAACAAAACCCCCAAGATGTTCAGATCCTACGTTTTGACAGCAACGTGGAACCCGATGGCTACAGCTTTGCGTACGAAACTAGTGATGGTACATCCAGACAAGAAGAAGGCAAACTCGACAACCCACAGTCCGAGAATGCAGCTCTGACAGTTACTGGACAGTATGCTTACGTAGCTCCTGACGGCAAGCACTACACTGTCACTTTCACAGCGGGACCCAACGGCTTCCAACCCAAAACCTCATTGGGCCAGAAGTAA

Protein

MLKYVTVACVLVALCSGAPQQNPQDVQILRFDSNVEPDGYSFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGKHYTVTFTAGPNGFQPKTSLGQK

Uniprot

C0H6L4   G8FVQ5   A0A212ESP2   A0A1E1W6B4   A0A194PY21   A0A194R0X8   + More
A0A2H1VJA8   A0A2A4IU70   A0A0L7H1F6   A0A1L8E3C3   A0A336LX70   A0A1B0GNX6   W8BQN7   I4DJF4   T1DQI3   A0A182FCP1   A0A1W4VAI2   A0A0A1XHQ1   C0H6M2   A0A3B0JXI1   W8BXU7   W5J9B1   A0A034V1C0   A0A034V1Z8   A0A0K8W0S8   A0A1J1IRW4   H9ISW2   D6WMB2   A0A2H4QYZ4   B3NGE3   A0A2H4QZ11   A0A2H4QYX4   A0A2H4QYZ2   A0A2H4QYY0   A0A2H4QZ41   B4LHF0   A0A2H4QZ04   A0A194R1G9   A0A034WSW4   A0A2H4QYX0   A0A2H1VIV9   A0A0K8U9Z8   T1PAJ5   A0A194PY16   A0A2A4ITS3   A0A2H4QYX6   A0A3B0KMU2   P91939   B4IZT2   A0A067RF26   A0A182Q833   W8BY71   A0A0M4EHM0   Q8IGZ8   A0A0M4EYK3   A0A3S2NUQ1   A0A0A1XNL9   A0A023EEV7   N6TE67   A0A1Q3FIR8   B4IZT5   A0A1J1IRY0   B4IZU0   D6WMB0   D6WMB3   A0A1I8NP48   B4ML04   B4IZT6   B4KWN7   B0XA27   A0A1I8MMH9   B4LHE8   A0A1I8M2I6   B4KWM2   B4ML00   Q2TAR4   B3NGE1   Q2LZE0   B4H6H1   A0A182TZI8   B4HUQ4   B4QJA5   A0A3B0KFM6   A0A1B0G041   A0A1A9XR09   A0A1B0C206   B4PJD4   A0A0K8V4L5   Q16IX7   B4KWP2   B4PJE2   A0A1I8JTT8   A0A182KPF5   Q7PNS3   A0A2H4QYV9   P92181   A0A1W4VAJ2   B4MKZ8  

Pubmed

19121390    19280704    22118469    26354079    26227816    24495485    + More
22651552    25830018    20920257    23761445    25348373    18362917    19820115    17994087    25315136    9383064    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24845553    24945155    23537049    15632085    22936249    17550304    17510324    20966253    12364791    14747013    17210077   

EMBL

BABH01013041    BR000524    FAA00525.1    JN082725    AER27822.1    AGBW02012745    + More
OWR44512.1    GDQN01008534    JAT82520.1    KQ459586    KPI97923.1    KQ460883    KPJ11357.1    ODYU01002880    SOQ40913.1    NWSH01008139    PCG62680.1    JTDY01023902    KOB14831.1    GFDF01000863    JAV13221.1    UFQT01000259    SSX22515.1    AJVK01014117    GAMC01002990    JAC03566.1    AK401422    BAM18044.1    GAMD01001140    JAB00451.1    GBXI01003413    JAD10879.1    BR000531    FAA00533.1    OUUW01000009    SPP85122.1    GAMC01000330    JAC06226.1    ADMH02002086    ETN59435.1    GAKP01023378    JAC35580.1    GAKP01023380    JAC35578.1    GDHF01007581    JAI44733.1    CVRI01000059    CRL02971.1    BABH01013046    BABH01013047    KQ971343    EFA04245.1    KY066650    ATY36878.1    CH954178    EDV51109.1    KY066651    ATY36879.1    KY066629    KY066631    KY066634    ATY36857.1    ATY36859.1    ATY36862.1    KY066648    KY066649    KY066652    KY066653    KY066654    KY066655    KY066656    ATY36876.1    ATY36877.1    ATY36880.1    ATY36881.1    ATY36882.1    ATY36883.1    ATY36884.1    KY066638    KY066639    KY066640    KY066642    KY066643    KY066644    KY066645    KY066646    KY066647    ATY36866.1    ATY36867.1    ATY36868.1    ATY36870.1    ATY36871.1    ATY36872.1    ATY36873.1    ATY36874.1    ATY36875.1    KY066633    ATY36861.1    CH940647    EDW68480.1    KY066641    ATY36869.1    KPJ11364.1    GAKP01000301    JAC58651.1    KY066637    ATY36865.1    ODYU01002809    SOQ40763.1    GDHF01028822    JAI23492.1    KA645719    AFP60348.1    KPI97918.1    NWSH01007118    PCG63079.1    KY066630    ATY36858.1    SPP85128.1    U83247    AE014296    KX531463    AAB88063.1    AAF50688.1    AGB94161.1    ANY27273.1    CH916366    EDV95667.1    KK852675    KDR18706.1    AXCN02000482    GAMC01005012    JAC01544.1    CP012525    ALC43214.1    BT001515    AAN71270.1    ALC43600.1    RSAL01000175    RVE45046.1    GBXI01001383    JAD12909.1    GAPW01006364    JAC07234.1    APGK01032633    KB740848    ENN78644.1    GFDL01007568    JAV27477.1    EDV95670.1    CRL02975.1    EDV95675.1    EFA04243.1    EFA04246.1    CH963847    EDW72929.1    EDV95671.1    CH933809    EDW17484.1    DS232561    EDS43453.1    EDW68478.1    EDW17469.1    EDW72925.1    BC110760    AAI10761.1    EDV51107.1    CH379069    EAL29569.1    CH479214    EDW33399.1    CH480817    EDW50675.1    CM000363    CM002912    EDX09414.1    KMY97874.1    SPP85129.1    CCAG010009302    JXJN01024293    CM000159    EDW93602.1    GDHF01018475    JAI33839.1    CH478046    EAT34219.1    EDW17489.1    EDW93610.2    APCN01000091    AAAB01008960    EAA11701.4    KY066636    ATY36864.1    U84755    U84745    AY071303    KX532141    AAB48462.1    AAB88064.1    AAF50687.1    AAL48925.1    ANY27951.1    EDW72923.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000053240    UP000218220    UP000037510    + More
UP000092462    UP000069272    UP000192221    UP000268350    UP000000673    UP000183832    UP000007266    UP000008711    UP000008792    UP000095301    UP000000803    UP000001070    UP000027135    UP000075886    UP000092553    UP000283053    UP000019118    UP000095300    UP000007798    UP000009192    UP000002320    UP000001819    UP000008744    UP000075902    UP000001292    UP000000304    UP000092444    UP000092443    UP000092460    UP000002282    UP000008820    UP000075840    UP000075882    UP000007062   

PRIDE

C0H6L4    C0H6M2    H9ISW2    P91939    Q8IGZ8    P92181    + More

Pfam

PF00379   Chitin_bind_4

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       
IPR031305   Casein_CS       

ProteinModelPortal

C0H6L4   G8FVQ5   A0A212ESP2   A0A1E1W6B4   A0A194PY21   A0A194R0X8   + More
A0A2H1VJA8   A0A2A4IU70   A0A0L7H1F6   A0A1L8E3C3   A0A336LX70   A0A1B0GNX6   W8BQN7   I4DJF4   T1DQI3   A0A182FCP1   A0A1W4VAI2   A0A0A1XHQ1   C0H6M2   A0A3B0JXI1   W8BXU7   W5J9B1   A0A034V1C0   A0A034V1Z8   A0A0K8W0S8   A0A1J1IRW4   H9ISW2   D6WMB2   A0A2H4QYZ4   B3NGE3   A0A2H4QZ11   A0A2H4QYX4   A0A2H4QYZ2   A0A2H4QYY0   A0A2H4QZ41   B4LHF0   A0A2H4QZ04   A0A194R1G9   A0A034WSW4   A0A2H4QYX0   A0A2H1VIV9   A0A0K8U9Z8   T1PAJ5   A0A194PY16   A0A2A4ITS3   A0A2H4QYX6   A0A3B0KMU2   P91939   B4IZT2   A0A067RF26   A0A182Q833   W8BY71   A0A0M4EHM0   Q8IGZ8   A0A0M4EYK3   A0A3S2NUQ1   A0A0A1XNL9   A0A023EEV7   N6TE67   A0A1Q3FIR8   B4IZT5   A0A1J1IRY0   B4IZU0   D6WMB0   D6WMB3   A0A1I8NP48   B4ML04   B4IZT6   B4KWN7   B0XA27   A0A1I8MMH9   B4LHE8   A0A1I8M2I6   B4KWM2   B4ML00   Q2TAR4   B3NGE1   Q2LZE0   B4H6H1   A0A182TZI8   B4HUQ4   B4QJA5   A0A3B0KFM6   A0A1B0G041   A0A1A9XR09   A0A1B0C206   B4PJD4   A0A0K8V4L5   Q16IX7   B4KWP2   B4PJE2   A0A1I8JTT8   A0A182KPF5   Q7PNS3   A0A2H4QYV9   P92181   A0A1W4VAJ2   B4MKZ8  

KEGG

100379444    no KO assigned | (RefSeq) CPR23, BmorCPR23; cuticular protein RR-1 motif 23

GO

GO:0042302   GO:0016021   GO:0040003   GO:0031012   GO:0008010   GO:0008270   GO:0006260   GO:0003824   GO:0005634   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

SignalP

Position:   1 - 17,         Likelihood:  0.993014

 

 

Length:

104

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0988100000000001

Exp number, first 60 AAs:

0.09797

Total prob of N-in:

0.38689

outside

1  -  104

 

 

Pi

388.210545

Theta

228.829446

Tajima's D

2.184813

CLR

0.321127

CSRT

0.908404579771011

Interpretation

Uncertain