Gene

KWMTBOMO13159

Pre Gene Modal

BGIBMGA000342

Annotation

PREDICTED:_cuticular_protein_RR-1_motif_27_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr22(+):9324103-9326828      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.569

CDS

ATGAAATTGTTACTAGCATTGTGTTTGGTGGGAATCGTCGCTACTGCCCCTCCGCCTAGGGAGGTGCAAATATTAAAATACGAAAATGTCAACAGTGGACGCGGCAGTTACAAATTCGGATTCGGGCAATCCGATGGCACCAGATTTGAGCAGGAAGGTGCGCTGAAGAACGAGGGCCAAGAACACGAATCCTTGTCCGTTAGAGGTCAATTTTCTTGGGTGGGTCCAGACGGCGTTACCTATACCGTGACTTATGTGGCTGATGAAGACGGCTACCAACCAGAAATAGAGCAAGGTCCCGGCGGAGCTTTACCTTCATCAATACTTTCCTCTTTAGCCGGTTAA

Protein

MKLLLALCLVGIVATAPPPREVQILKYENVNSGRGSYKFGFGQSDGTRFEQEGALKNEGQEHESLSVRGQFSWVGPDGVTYTVTYVADEDGYQPEIEQGPGGALPSSILSSLAG

Uniprot

C0H6L8   C0H6L9   Q5MGQ3   I4DJ56   I4DMR5   I4DJF4   + More
A0A194R1G9   C0H6M0   A0A194R0P2   C0H6L7   A0A2A4ITS3   A0A2H1VIV9   Q6T3A8   A0A2H1WSQ4   C0H6M2   H9ISW2   Q5PXD9   A0A194PY16   A0A2A4JA72   A0A0L7LAF2   A0A212ESN6   A0A3S2NVI3   A0A212ESR1   A0A3B0KFM6   Q2LZE6   B4PJE2   B4HUR1   B4QJB2   B4ML08   A0A3S2NB00   D6WMA8   A0A194PYU6   A0A1J1IWQ4   A0A0L7KDA8   D6WMB0   A0A0K8VPS1   A0A034WTU9   B4IZU1   A0A2H1WPF8   A0A1L8E3C3   A0A0K8VZN1   A0A1B0GNX6   A0A034V1C0   A0A139WH91   D6WMB3   Q2LZE0   B4H6H1   A0A034WSW4   A0A0M3QW63   A0A336LX70   B4IZT2   A0A1J1IRY0   A0A3B0KAH0   A0A1W4V957   A0A1Q3FIR8   A0A0M4EGM8   B4KWN4   A0A1J1IRW4   P91941   A0A336LZR1   A0A0K8U9Z8   B3NGE8   A0A1A9XR07   A0A1A9VH93   A0A1B0C2P9   A0A1A9Z928   N6TE67   A0A1I8NXK4   A0A1I8MMH9   A0A1A9W4X7   A0A0A1XNL9   Q2TAR4   B3NGE1   S4S7G3   A0A182FCP1   B4ML00   T1DQI3   A0A1J1IV07   A0A1I8Q011   B4PJD4   A0A0L0CR75   T1PAJ5   B4HUQ2   B4QJA3   A0A1W4UWU2   R4V340   Q8I0P8   A0A0K8V4L5   B4KWP2   A0A2H4QYZ4   A0A1W4V9K8   W5J9B1   S4S7F9   A0A182SIT2   A0A2H4QYX4   A0A2H4QYZ2   A0A2H4QYY0   A0A2H4QZ11  

Pubmed

19121390    19280704    16023793    22651552    26354079    16323268    + More
26227816    22118469    15632085    17994087    17550304    22936249    18362917    19820115    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    23537049    25315136    25830018    26108605    20920257    23761445   

EMBL

BABH01013045    BR000528    FAA00529.1    BR000529    FAA00530.1    AY829733    + More
AAV91347.1    AK401324    KQ459586    BAM17946.1    KPI97917.1    AK402583    BAM19205.1    AK401422    BAM18044.1    KQ460883    KPJ11364.1    BR000530    FAA00531.1    KPJ11363.1    BR000527    FAA00528.1    NWSH01007118    PCG63079.1    ODYU01002809    SOQ40763.1    AY438330    AAR15419.1    ODYU01010778    SOQ56091.1    BR000531    FAA00533.1    BABH01013046    BABH01013047    AY823519    AAV73780.1    KPI97918.1    NWSH01002414    PCG68340.1    JTDY01001988    KOB72390.1    AGBW02012745    OWR44508.1    RSAL01000156    RVE45640.1    OWR44509.1    OUUW01000009    SPP85129.1    CH379069    EAL29567.3    CM000159    EDW93610.2    CH480817    EDW50682.1    CM000363    CM002912    EDX09421.1    KMY97881.1    CH963847    EDW72933.1    RSAL01000133    RVE46292.1    KQ971343    EFA03332.2    KPI97919.1    CVRI01000059    CRL02985.1    JTDY01010080    KOB61318.1    EFA04243.1    GDHF01011430    JAI40884.1    GAKP01001205    JAC57747.1    CH916366    EDV95676.1    ODYU01010074    SOQ54918.1    GFDF01000863    JAV13221.1    GDHF01007977    JAI44337.1    AJVK01014117    GAKP01023378    JAC35580.1    KYB27279.1    EFA04246.1    EAL29569.1    CH479214    EDW33399.1    GAKP01000301    JAC58651.1    CP012525    ALC43212.1    ALC43599.1    UFQT01000259    SSX22515.1    EDV95667.1    CRL02975.1    SPP85120.1    GFDL01007568    JAV27477.1    ALC43602.1    CH933809    EDW17481.2    CRL02971.1    AE014296    AY113609    KX531329    AAF50685.2    AAM29614.1    ANY27139.1    SSX22511.1    GDHF01028822    JAI23492.1    CH954178    EDV51114.1    JXJN01024601    APGK01032633    KB740848    ENN78644.1    GBXI01001383    JAD12909.1    BC110760    AAI10761.1    EDV51107.1    JF415080    AFC88813.1    EDW72925.1    GAMD01001140    JAB00451.1    CRL02974.1    EDW93602.1    JRES01000128    KNC33929.1    KA645719    AFP60348.1    EDW50673.1    EDX09412.1    KMY97872.1    KC632389    AGM32203.1    BT001606    KX532120    AAN12088.1    AAN71361.1    ANY27930.1    GDHF01018475    JAI33839.1    EDW17489.1    KY066650    ATY36878.1    ADMH02002086    ETN59435.1    JF415079    AFC88812.1    KY066629    KY066631    KY066634    ATY36857.1    ATY36859.1    ATY36862.1    KY066648    KY066649    KY066652    KY066653    KY066654    KY066655    KY066656    ATY36876.1    ATY36877.1    ATY36880.1    ATY36881.1    ATY36882.1    ATY36883.1    ATY36884.1    KY066638    KY066639    KY066640    KY066642    KY066643    KY066644    KY066645    KY066646    KY066647    ATY36866.1    ATY36867.1    ATY36868.1    ATY36870.1    ATY36871.1    ATY36872.1    ATY36873.1    ATY36874.1    ATY36875.1    KY066651    ATY36879.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000037510    UP000007151    + More
UP000283053    UP000268350    UP000001819    UP000002282    UP000001292    UP000000304    UP000007798    UP000007266    UP000183832    UP000001070    UP000092462    UP000008744    UP000092553    UP000192221    UP000009192    UP000000803    UP000008711    UP000092443    UP000078200    UP000092460    UP000092445    UP000019118    UP000095300    UP000095301    UP000091820    UP000069272    UP000037069    UP000000673    UP000075901   

PRIDE

C0H6L8    C0H6L9    C0H6L7    C0H6M2    H9ISW2    P91941    + More
Q8I0P8   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6L8   C0H6L9   Q5MGQ3   I4DJ56   I4DMR5   I4DJF4   + More
A0A194R1G9   C0H6M0   A0A194R0P2   C0H6L7   A0A2A4ITS3   A0A2H1VIV9   Q6T3A8   A0A2H1WSQ4   C0H6M2   H9ISW2   Q5PXD9   A0A194PY16   A0A2A4JA72   A0A0L7LAF2   A0A212ESN6   A0A3S2NVI3   A0A212ESR1   A0A3B0KFM6   Q2LZE6   B4PJE2   B4HUR1   B4QJB2   B4ML08   A0A3S2NB00   D6WMA8   A0A194PYU6   A0A1J1IWQ4   A0A0L7KDA8   D6WMB0   A0A0K8VPS1   A0A034WTU9   B4IZU1   A0A2H1WPF8   A0A1L8E3C3   A0A0K8VZN1   A0A1B0GNX6   A0A034V1C0   A0A139WH91   D6WMB3   Q2LZE0   B4H6H1   A0A034WSW4   A0A0M3QW63   A0A336LX70   B4IZT2   A0A1J1IRY0   A0A3B0KAH0   A0A1W4V957   A0A1Q3FIR8   A0A0M4EGM8   B4KWN4   A0A1J1IRW4   P91941   A0A336LZR1   A0A0K8U9Z8   B3NGE8   A0A1A9XR07   A0A1A9VH93   A0A1B0C2P9   A0A1A9Z928   N6TE67   A0A1I8NXK4   A0A1I8MMH9   A0A1A9W4X7   A0A0A1XNL9   Q2TAR4   B3NGE1   S4S7G3   A0A182FCP1   B4ML00   T1DQI3   A0A1J1IV07   A0A1I8Q011   B4PJD4   A0A0L0CR75   T1PAJ5   B4HUQ2   B4QJA3   A0A1W4UWU2   R4V340   Q8I0P8   A0A0K8V4L5   B4KWP2   A0A2H4QYZ4   A0A1W4V9K8   W5J9B1   S4S7F9   A0A182SIT2   A0A2H4QYX4   A0A2H4QYZ2   A0A2H4QYY0   A0A2H4QZ11  

KEGG

100379440    no KO assigned | (RefSeq) CPR27, BmorCPR27; cuticular protein RR-1 motif 27

GO

GO:0042302   GO:0016021   GO:0008010   GO:0040003   GO:0031012   GO:0008270   GO:0006260   GO:0003824   GO:0005634   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

SignalP

Position:   1 - 15,         Likelihood:  0.997382

 

 

Length:

114

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0441600000000001

Exp number, first 60 AAs:

0.04398

Total prob of N-in:

0.03509

outside

1  -  114

 

 

Pi

297.287363

Theta

175.400422

Tajima's D

2.468314

CLR

0.219916

CSRT

0.939053047347633

Interpretation

Uncertain