Gene

KWMTBOMO13158

Pre Gene Modal

BGIBMGA000341

Annotation

cuticular_protein_RR-1_motif_28_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):9318663-9319840      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.968

CDS

ATGAAATTGTTATTAGCATTGTGTTTGGTGGGAATAGTTGCCGCTTCCCGTCCACCTGGTGAGGCTCAGCTAACAAGCTACGAAAATGTGCATAATGGACGGGGTAATTACAGATTTGGATATAGCCAATCTGATGGGACCGTATTTGAGCAGGAAGGTACGCTGAAGAACGAGGGCCAAGAAGAAGAATCCCTGGCTGTTAGAGGTAAATTTTCTTGGGTGGGTCCAGACGGCGTTACCTATACCGTGACTTTTGTGGCTGATGAAGATGGTTACCAACCAGAAATAGAGCAAGGTCCCGGCGGAGCTGTACCGTCAGCAATACTTCATTCTCTTGCCGGTTAA

Protein

MKLLLALCLVGIVAASRPPGEAQLTSYENVHNGRGNYRFGYSQSDGTVFEQEGTLKNEGQEEESLAVRGKFSWVGPDGVTYTVTFVADEDGYQPEIEQGPGGAVPSAILHSLAG

Uniprot

C0H6L9   C0H6L8   Q5MGQ3   I4DJ56   I4DMR5   I4DJF4   + More
C0H6M0   A0A194R1G9   A0A2H1VIV9   A0A194R0P2   C0H6L7   A0A2H1WSQ4   A0A2A4ITS3   Q6T3A8   A0A194PY16   A0A2A4JA72   C0H6M2   H9ISW2   Q5PXD9   A0A3B0KFM6   Q2LZE6   A0A212ESN6   A0A0L7LAF2   A0A3S2NVI3   B4IZU1   B4ML08   B4PJE2   D6WMA8   B4HUR1   B4QJB2   A0A212ESR1   A0A0K8VPS1   A0A034WTU9   A0A0M4EGM8   A0A139WH91   A0A0K8VZN1   A0A1J1IRY0   A0A1J1IWQ4   B4LHF6   D6WMB0   A0A1W4V957   B4KWN4   A0A034V1C0   A0A336LX70   A0A1I8NXK4   A0A1I8MMH9   A0A3S2NB00   B3MA11   P91941   A0A1Q3FIR8   A0A2H1WPF8   A0A1B0GNX6   A0A1I8Q011   B3NGE8   A0A1L8E3C3   A0A194PYU6   D6WMB3   A0A0M3QW63   A0A034WSW4   D6WMB1   S4S7G3   B4IZT2   A0A1J1IRW4   B4HUQ2   B4QJA3   B4ML00   A0A2H4QYZ4   S4S7F9   A0A0A1XNL9   A0A2H4QYX4   A0A2H4QYZ2   A0A2H4QYY0   A0A1A9XR07   A0A1A9VH93   A0A1B0C2P9   A0A1A9Z928   A0A2H4QZ11   A0A1I8NXN1   A0A1I8QAB3   A0A0K8U9Z8   A0A1A9W4X7   W8BY71   Q16IX7   Q2LZE0   B4H6H1   A0A1B0FY22   Q8I0P8   N6TE67   B4KWP2   A0A2H4QZ41   Q2TAR4   B3NGE1   A0A2H4QYX6   B4PJD4   A0A2H4QZ04   B0XA27   A0A1J1IV07  

Pubmed

19280704    19121390    16023793    22651552    26354079    16323268    + More
15632085    17994087    22118469    26227816    17550304    18362917    19820115    22936249    25348373    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25830018    24495485    17510324    23537049   

EMBL

BR000529    FAA00530.1    BABH01013045    BR000528    FAA00529.1    AY829733    + More
AAV91347.1    AK401324    KQ459586    BAM17946.1    KPI97917.1    AK402583    BAM19205.1    AK401422    BAM18044.1    BR000530    FAA00531.1    KQ460883    KPJ11364.1    ODYU01002809    SOQ40763.1    KPJ11363.1    BR000527    FAA00528.1    ODYU01010778    SOQ56091.1    NWSH01007118    PCG63079.1    AY438330    AAR15419.1    KPI97918.1    NWSH01002414    PCG68340.1    BR000531    FAA00533.1    BABH01013046    BABH01013047    AY823519    AAV73780.1    OUUW01000009    SPP85129.1    CH379069    EAL29567.3    AGBW02012745    OWR44508.1    JTDY01001988    KOB72390.1    RSAL01000156    RVE45640.1    CH916366    EDV95676.1    CH963847    EDW72933.1    CM000159    EDW93610.2    KQ971343    EFA03332.2    CH480817    EDW50682.1    CM000363    CM002912    EDX09421.1    KMY97881.1    OWR44509.1    GDHF01011430    JAI40884.1    GAKP01001205    JAC57747.1    CP012525    ALC43602.1    KYB27279.1    GDHF01007977    JAI44337.1    CVRI01000059    CRL02975.1    CRL02985.1    CH940647    EDW68486.1    EFA04243.1    CH933809    EDW17481.2    GAKP01023378    JAC35580.1    UFQT01000259    SSX22515.1    RSAL01000133    RVE46292.1    CH902618    EDV41231.1    AE014296    AY113609    KX531329    AAF50685.2    AAM29614.1    ANY27139.1    GFDL01007568    JAV27477.1    ODYU01010074    SOQ54918.1    AJVK01014117    CH954178    EDV51114.1    GFDF01000863    JAV13221.1    KPI97919.1    EFA04246.1    ALC43212.1    ALC43599.1    GAKP01000301    JAC58651.1    EFA04244.1    JF415080    AFC88813.1    EDV95667.1    CRL02971.1    EDW50673.1    EDX09412.1    KMY97872.1    EDW72925.1    KY066650    ATY36878.1    JF415079    AFC88812.1    GBXI01001383    JAD12909.1    KY066629    KY066631    KY066634    ATY36857.1    ATY36859.1    ATY36862.1    KY066648    KY066649    KY066652    KY066653    KY066654    KY066655    KY066656    ATY36876.1    ATY36877.1    ATY36880.1    ATY36881.1    ATY36882.1    ATY36883.1    ATY36884.1    KY066638    KY066639    KY066640    KY066642    KY066643    KY066644    KY066645    KY066646    KY066647    ATY36866.1    ATY36867.1    ATY36868.1    ATY36870.1    ATY36871.1    ATY36872.1    ATY36873.1    ATY36874.1    ATY36875.1    JXJN01024601    KY066651    ATY36879.1    GDHF01028822    JAI23492.1    GAMC01005012    JAC01544.1    CH478046    EAT34219.1    EAL29569.1    CH479214    EDW33399.1    AJVK01014120    BT001606    KX532120    AAN12088.1    AAN71361.1    ANY27930.1    APGK01032633    KB740848    ENN78644.1    EDW17489.1    KY066633    ATY36861.1    BC110760    AAI10761.1    EDV51107.1    KY066630    ATY36858.1    EDW93602.1    KY066641    ATY36869.1    DS232561    EDS43453.1    CRL02974.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000268350    UP000001819    + More
UP000007151    UP000037510    UP000283053    UP000001070    UP000007798    UP000002282    UP000007266    UP000001292    UP000000304    UP000092553    UP000183832    UP000008792    UP000192221    UP000009192    UP000095300    UP000095301    UP000007801    UP000000803    UP000092462    UP000008711    UP000092443    UP000078200    UP000092460    UP000092445    UP000091820    UP000008820    UP000008744    UP000019118    UP000002320   

PRIDE

C0H6L9    C0H6L8    C0H6L7    C0H6M2    H9ISW2    P91941    + More
Q8I0P8   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6L9   C0H6L8   Q5MGQ3   I4DJ56   I4DMR5   I4DJF4   + More
C0H6M0   A0A194R1G9   A0A2H1VIV9   A0A194R0P2   C0H6L7   A0A2H1WSQ4   A0A2A4ITS3   Q6T3A8   A0A194PY16   A0A2A4JA72   C0H6M2   H9ISW2   Q5PXD9   A0A3B0KFM6   Q2LZE6   A0A212ESN6   A0A0L7LAF2   A0A3S2NVI3   B4IZU1   B4ML08   B4PJE2   D6WMA8   B4HUR1   B4QJB2   A0A212ESR1   A0A0K8VPS1   A0A034WTU9   A0A0M4EGM8   A0A139WH91   A0A0K8VZN1   A0A1J1IRY0   A0A1J1IWQ4   B4LHF6   D6WMB0   A0A1W4V957   B4KWN4   A0A034V1C0   A0A336LX70   A0A1I8NXK4   A0A1I8MMH9   A0A3S2NB00   B3MA11   P91941   A0A1Q3FIR8   A0A2H1WPF8   A0A1B0GNX6   A0A1I8Q011   B3NGE8   A0A1L8E3C3   A0A194PYU6   D6WMB3   A0A0M3QW63   A0A034WSW4   D6WMB1   S4S7G3   B4IZT2   A0A1J1IRW4   B4HUQ2   B4QJA3   B4ML00   A0A2H4QYZ4   S4S7F9   A0A0A1XNL9   A0A2H4QYX4   A0A2H4QYZ2   A0A2H4QYY0   A0A1A9XR07   A0A1A9VH93   A0A1B0C2P9   A0A1A9Z928   A0A2H4QZ11   A0A1I8NXN1   A0A1I8QAB3   A0A0K8U9Z8   A0A1A9W4X7   W8BY71   Q16IX7   Q2LZE0   B4H6H1   A0A1B0FY22   Q8I0P8   N6TE67   B4KWP2   A0A2H4QZ41   Q2TAR4   B3NGE1   A0A2H4QYX6   B4PJD4   A0A2H4QZ04   B0XA27   A0A1J1IV07  

KEGG

100379439    no KO assigned | (RefSeq) CPR28, BmorCPR28; cuticular protein RR-1 motif 28

GO

GO:0042302   GO:0016021   GO:0008010   GO:0040003   GO:0031012   GO:0008270   GO:0006260   GO:0003824   GO:0005634   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

SignalP

Position:   1 - 15,         Likelihood:  0.998592

 

 

Length:

114

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0123

Exp number, first 60 AAs:

0.01213

Total prob of N-in:

0.03358

outside

1  -  114

 

 

Pi

230.522418

Theta

226.373951

Tajima's D

0.05771

CLR

255.28365

CSRT

0.387080645967702

Interpretation

Uncertain