Silkworm Genome Informatics Database

Gene

KWMTBOMO13156

Pre Gene Modal

BGIBMGA000340

Annotation

_putative_cuticle_protein_[Bombyx_mori]

Location

Bomo_Chr22(+):9307113-9307803 View in EpiBrowser

Location in the cell

Extracellular Reliability : 3.578

CDS

ATGAAACTGTTCGTGATCGTCGCCCTTGTCGCCGTAGCATCGGCTGCTCCCCAAAACCCTCAGGACGTACAGATCCTTCGCTATGACAGCAACAATGATGGCTTGAACGCTTACGACTTTGCTTGGGAACTGTCGGATGGCAGTAAGCACCAAGAACAGGGTCAACTGAAAAACCAAGGTACAGAAAATGAAGCTATATCGGTTCAAGGACAGTACTCTTGGGTGGCACCTGACGGAATCACGTATACTGTTACGTACATCGCCGACGAGAACGGTTTCCAGCCACAAATCCAACAAGGAGCTGGAGGAGCAATACCGCCAGCGGTCATAGCTTCCCTCGTCGGCTAA

Protein

MKLFVIVALVAVASAAPQNPQDVQILRYDSNNDGLNAYDFAWELSDGSKHQEQGQLKNQGTENEAISVQGQYSWVAPDGITYTVTYIADENGFQPQIQQGAGGAIPPAVIASLVG

Uniprot

C0H6M2 I4DJF4 A0A194R1G9 A0A2H1WSQ4 C0H6L7 D6WMA8 + More
D6WMB0 N6TE67 A0A3S2NB00

Pubmed

19280704 22651552 26354079 19121390 18362917 19820115 + More
23537049

EMBL

BR000531 FAA00533.1 AK401422 BAM18044.1 KQ460883 KPJ11364.1 + More
ODYU01010778 SOQ56091.1 BABH01013045 BR000527 FAA00528.1 KQ971343 EFA03332.2 EFA04243.1 APGK01032633 KB740848 ENN78644.1 RSAL01000133 RVE46292.1

Proteomes

UP000053240 UP000005204 UP000007266 UP000019118 UP000283053

PRIDE

C0H6M2 C0H6L7

Pfam

PF00379 Chitin_bind_4

Interpro

IPR031311 CHIT_BIND_RR_consensus + More
IPR000618 Insect_cuticle

ProteinModelPortal

C0H6M2 I4DJF4 A0A194R1G9 A0A2H1WSQ4 C0H6L7 D6WMA8 + More
D6WMB0 N6TE67 A0A3S2NB00

KEGG

100379437 no KO assigned | (RefSeq) BmorCPR30, CPR30; cuticular protein RR-1 motif 30

GO

GO:0042302 GO:0008270 GO:0006260 GO:0003824 GO:0005634 GO:0005737 GO:0048869 GO:0003676 GO:0016491 GO:0015930

SignalP

Position: 1 - 15, Likelihood: 0.999200

Length:

115

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04871

Exp number, first 60 AAs:

0.04145

Total prob of N-in:

0.06405

outside

1 - 115

Pi

238.897153

Theta

194.345773

Tajima's D

0.721481

CLR

0.002794

CSRT

0.579121043947803

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree