Gene

KWMTBOMO13153

Pre Gene Modal

BGIBMGA000338

Annotation

cuticular_protein_RR-1_motif_32_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):9265473-9269447      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.668

CDS

ATGAAATCGTTCGTAGTAATCTCCGCCTTGGTGGCAATGGCTTGCGCCGCCCCCCAGCTGACACAGTATCAGCAACAATACCAAGGTCAAGTAATTCCCATCCTGAGTCAATCACAGGACGTGAACTTCGACGGCTCATACCAGTTCAGCTACGAGACCGGCAATGGCATCGCTGCTCAAGAACAAGGTTACCTCAAGAACGCTGGAGCTAAGGATGCCGAAGCCCAAGTTGCACAAGGATCTTTCACTTACACCTCCCCTGAGGGCATCCCTATCTCTGTTTCTTACGTCGCTGATGAGAACGGTTTCCGCCCAGAAGGTGCTCATCTTCCTACTCCTCCCCCGATCCCAGAAGCCATCCTCCGGGCTCTTCAATACATCGAATCTCAGCCCCAGAAACCCCAGCAAACCTACCAACCCCAGCCAACCTACCAACCCCAACAATACCAGCCTTTCCGCGGTTAA

Protein

MKSFVVISALVAMACAAPQLTQYQQQYQGQVIPILSQSQDVNFDGSYQFSYETGNGIAAQEQGYLKNAGAKDAEAQVAQGSFTYTSPEGIPISVSYVADENGFRPEGAHLPTPPPIPEAILRALQYIESQPQKPQQTYQPQPTYQPQQYQPFRG

Uniprot

C0H6M4   A0A2H1X3S9   A0A2A4J2I4   A0A194R0P7   G8FVQ1   I4DIE4   + More
A0A0L7K4Z8   A0A2P8Y5M5   A0A1I8NPH7   A0A0T6B8U6   A0A2J7R753   T1P8T8   A0A1J1I6U2   A0A1B6CC76   A0A1B6G169   A0A067R439   A0A1B6IE24   A0A1J1ILD8   V5IB19   A0A2P8XYZ9   A0A2P8Y0M8   A0A182FCP8   B0ZYQ1   W5J4P7   A0A2S1ZS72   A0A2S1ZS74   A0A084W0S8   A0A2R7WSK8   B4GCE4   A0A182QBG5   Q290D7   A0A222NTA3   C0H6N5   A0A0Q5VPK8   A0A2J7R701   A0A182QNQ5   A0A182S6R8   W5J635   A0A1L8E3U5   A0A1A9Y1U9   A0A1B0AM89   A0A182MFL3   A0A182TYP4   A0A182TDB7   A0A182KPG4   Q7PNS6   A0A182I1R7   A0A182P5L6   T1GT21   A0A2H1VDB8   Q7Q1A8   A0A182KFV7   A0A182X765   A0A182UU39   A0A182KTN1   A0A182U3Y3   A0A182VEM2   A0A1B0FN58   A0A2J7R6Z4   A0A1W4U635   G8FVP6  

Pubmed

19121390    19280704    26354079    22651552    26227816    29403074    + More
25315136    24845553    20920257    23761445    29712872    24438588    17994087    15632085    20966253    12364791    14747013    17210077   

EMBL

BABH01013051    BABH01013052    BR000533    FAA00535.1    ODYU01013214    SOQ59908.1    + More
NWSH01003986    PCG65593.1    KQ460883    KPJ11368.1    JN082721    AER27818.1    AK401062    KQ459586    BAM17684.1    KPI97914.1    JTDY01010642    KOB58137.1    PYGN01000899    PSN39557.1    LJIG01009094    KRT83768.1    NEVH01006738    PNF36675.1    KA644545    AFP59174.1    CVRI01000043    CRK95976.1    GEDC01026383    JAS10915.1    GECZ01013580    JAS56189.1    KK852994    KDR12717.1    GECU01022554    JAS85152.1    CVRI01000054    CRK99894.1    GALX01000205    JAB68261.1    PYGN01001152    PSN37144.1    PYGN01001077    PSN37817.1    EU407177    ABZ04122.1    ADMH02002086    ETN59442.1    MF942783    AWK28306.1    MF942790    AWK28313.1    ATLV01019157    KE525263    KFB43822.1    KK855351    PTY22120.1    CH479181    EDW32421.1    AXCN02000482    CM000071    EAL25425.3    KX503036    ASQ42722.1    BABH01013076    BR000544    FAA00546.1    CH954179    KQS62844.1    PNF36609.1    AXCN02002061    ETN59441.1    GFDF01000889    JAV13195.1    JXJN01000372    AXCM01002738    AAAB01008960    EAA11695.3    APCN01000091    CAQQ02175411    CAQQ02175412    ODYU01001934    SOQ38825.1    AAAB01008980    EAA14443.4    CCAG010006227    PNF36608.1    JN082716    AER27814.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510    UP000245037    + More
UP000095300    UP000235965    UP000095301    UP000183832    UP000027135    UP000069272    UP000000673    UP000030765    UP000008744    UP000075886    UP000001819    UP000008711    UP000075901    UP000092443    UP000092460    UP000075883    UP000075902    UP000075882    UP000007062    UP000075840    UP000075885    UP000015102    UP000075881    UP000076407    UP000075903    UP000092444    UP000192221   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       

ProteinModelPortal

C0H6M4   A0A2H1X3S9   A0A2A4J2I4   A0A194R0P7   G8FVQ1   I4DIE4   + More
A0A0L7K4Z8   A0A2P8Y5M5   A0A1I8NPH7   A0A0T6B8U6   A0A2J7R753   T1P8T8   A0A1J1I6U2   A0A1B6CC76   A0A1B6G169   A0A067R439   A0A1B6IE24   A0A1J1ILD8   V5IB19   A0A2P8XYZ9   A0A2P8Y0M8   A0A182FCP8   B0ZYQ1   W5J4P7   A0A2S1ZS72   A0A2S1ZS74   A0A084W0S8   A0A2R7WSK8   B4GCE4   A0A182QBG5   Q290D7   A0A222NTA3   C0H6N5   A0A0Q5VPK8   A0A2J7R701   A0A182QNQ5   A0A182S6R8   W5J635   A0A1L8E3U5   A0A1A9Y1U9   A0A1B0AM89   A0A182MFL3   A0A182TYP4   A0A182TDB7   A0A182KPG4   Q7PNS6   A0A182I1R7   A0A182P5L6   T1GT21   A0A2H1VDB8   Q7Q1A8   A0A182KFV7   A0A182X765   A0A182UU39   A0A182KTN1   A0A182U3Y3   A0A182VEM2   A0A1B0FN58   A0A2J7R6Z4   A0A1W4U635   G8FVP6  

KEGG

100379435    no KO assigned | (RefSeq) CPR32, BmorCPR32; cuticular protein RR-1 motif 32

GO

GO:0042302   GO:0016021   GO:0008270   GO:0006260   GO:0003824   GO:0005634   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

SignalP

Position:   1 - 16,         Likelihood:  0.995556

 

 

Length:

154

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.81162

Exp number, first 60 AAs:

0.8112

Total prob of N-in:

0.08808

outside

1  -  154

 

 

Pi

199.792827

Theta

177.977439

Tajima's D

0.455784

CLR

0.292551

CSRT

0.497675116244188

Interpretation

Uncertain