Gene

KWMTBOMO13151  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000336

Annotation

cuticular_protein_RR-1_motif_34_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):9227153-9232317      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.15 Extracellular   Reliability : 1.614 Nuclear   Reliability : 1.067

CDS

ATGAAGCTGCTGATCGCAATCACCGCTCTTATTGCCGTTGCGGCGGCTCTTCCCCAAAGGAAGGTTTCGTTGAAGCCAGAACAGCAAGTGGAAGACCAACTCCCACTTGAACAAAACTTCAACAACTATCAGCCCCAGCAACAGGAATATAGACAAGCAAAACCAGTCGATGACTTCAGACCTAAAGTCCAATTGGAGACCAGTACCTACATCCCCATTATCCGTTTCGATAAGGAACAAGGAACCGACGGAAGCTACAAAACTTCATATGAAACTGGTAACAACATTCAGGCTCAAGAGCAGGGTTATTTGAAGACAGTCGGTGATAACCAAGACAACACTGCTCTGGTCCAACAGGGATCCTATACATACACAGCCCCTGATGGTCAAGTCATTACCGTCGAGTACACCGCTGACGAGTTCGGTTTCAGAGTTTCCGGTGACCACATCCCTACCCCTCCCCCTGTATCGGCTGAAATTCAAAAAGGCCTTGACCTTATCTACGCCGGCATCAAGGCTAACCAGGAACGCGCCGCCATAGAAGCCAAGTCAAACCCCGAAGCTGCCAGACAACAAGAAGAGAAAGCCGCTCTCGATTACAAAGGTCAATACTACCAGCAATAA

Protein

MKLLIAITALIAVAAALPQRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLETSTYIPIIRFDKEQGTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTYTAPDGQVITVEYTADEFGFRVSGDHIPTPPPVSAEIQKGLDLIYAGIKANQERAAIEAKSNPEAARQQEEKAALDYKGQYYQQ

Uniprot

C0H6M6   A0A2H1V9Q8   A0A3S2LWK8   A0A194R292   I4DIB8   A0A194PX62   + More
A0A0L7L5P7   A0A212FBD8   I4DLX0   U4UM93   N6TTY9   D6WNK3   A0A1I8MN09   T1PCU4   A0A0T6BD70   A0A1I8NUR7   B0WRC5   A0A1A9X4I3   Q290C7   B4GCF7   A0A0A1WTT4   A0A1A9Y1V7   A0A1B0AMA4   A0A034WAA8   A0A1B0ABQ0   D3TQA0   A0A3B0J0J0   A0A1W4UHD6   A1Z8Z7   B4HPI1   B4QCV6   B4P5A9   B4KRV1   B3NS15   B3MCJ9   B4LLS6   E9IEV8   B4MQP1   W5J7M7   A0A154PJS9   A0A336L1M9   A0A336LWF9   A0A195D702   R4G598  

Pubmed

19121390    19280704    26354079    22651552    26227816    22118469    + More
23537049    18362917    19820115    25315136    15632085    17994087    25830018    25348373    20353571    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    17550304    21282665    20920257    23761445   

EMBL

BABH01013054    BR000535    FAA00537.1    ODYU01001157    SOQ36974.1    RSAL01000156    + More
RVE45633.1    KQ460883    KPJ11370.1    AK401036    BAM17658.1    KQ459586    KPI97912.1    JTDY01002787    KOB70730.1    AGBW02009345    OWR51055.1    AK402288    BAM18910.1    KB632279    ERL91281.1    APGK01052428    KB741212    ENN72720.1    KQ971343    EFA03218.1    KA645950    AFP60579.1    LJIG01001887    KRT85053.1    DS232054    EDS33315.1    CM000071    EAL25433.1    CH479181    EDW32434.1    GBXI01012367    JAD01925.1    JXJN01000378    GAKP01007730    JAC51222.1    CCAG010002092    EZ423602    ADD19878.1    OUUW01000001    SPP74205.1    AE013599    AAF58515.1    CH480816    EDW47565.1    CM000362    CM002911    EDX06767.1    KMY93194.1    CM000158    EDW90771.1    CH933808    EDW09392.1    CH954179    EDV56317.1    CH902619    EDV36233.1    CH940648    EDW61949.2    GL762722    EFZ20893.1    CH963849    EDW74430.1    ADMH02002020    ETN59971.1    KQ434924    KZC11538.1    UFQS01001422    UFQT01001422    SSX10807.1    SSX30488.1    UFQS01000134    UFQT01000134    SSX00277.1    SSX20657.1    KQ976750    KYN08653.1    ACPB03009505    GAHY01000710    JAA76800.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000053268    UP000037510    UP000007151    + More
UP000030742    UP000019118    UP000007266    UP000095301    UP000095300    UP000002320    UP000091820    UP000001819    UP000008744    UP000092443    UP000092460    UP000092445    UP000092444    UP000268350    UP000192221    UP000000803    UP000001292    UP000000304    UP000002282    UP000009192    UP000008711    UP000007801    UP000008792    UP000007798    UP000000673    UP000076502    UP000078542    UP000015103   

PRIDE

C0H6M6    A1Z8Z7   

Pfam

PF00379   Chitin_bind_4        + More
PF14636   FNIP_N
PF14638   FNIP_C
PF01556   DnaJ_C
PF14637   FNIP_M

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       
IPR008971   HSP40/DnaJ_pept-bd       
IPR028085   FNIP_mid_dom       
IPR028084   FNIP_N_dom       
IPR037545   DENN_FNIP1/2       
IPR002939   DnaJ_C       
IPR026156   FNIP_fam       
IPR028086   FNIP_C_dom       

SUPFAM

SSF49493   SSF49493       

ProteinModelPortal

C0H6M6   A0A2H1V9Q8   A0A3S2LWK8   A0A194R292   I4DIB8   A0A194PX62   + More
A0A0L7L5P7   A0A212FBD8   I4DLX0   U4UM93   N6TTY9   D6WNK3   A0A1I8MN09   T1PCU4   A0A0T6BD70   A0A1I8NUR7   B0WRC5   A0A1A9X4I3   Q290C7   B4GCF7   A0A0A1WTT4   A0A1A9Y1V7   A0A1B0AMA4   A0A034WAA8   A0A1B0ABQ0   D3TQA0   A0A3B0J0J0   A0A1W4UHD6   A1Z8Z7   B4HPI1   B4QCV6   B4P5A9   B4KRV1   B3NS15   B3MCJ9   B4LLS6   E9IEV8   B4MQP1   W5J7M7   A0A154PJS9   A0A336L1M9   A0A336LWF9   A0A195D702   R4G598  

KEGG

100379433    no KO assigned | (RefSeq) CPR34, BmorCPR34; cuticular protein RR-1 motif 34

GO

GO:0042302   GO:0016021   GO:0040003   GO:0031012   GO:0008010   GO:0051082   GO:0006457   GO:0008270   GO:0006260   GO:0003824   GO:0005634   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

SignalP

Position:   1 - 16,         Likelihood:  0.992428

 

 

Length:

207

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.21616

Exp number, first 60 AAs:

0.21616

Total prob of N-in:

0.04746

outside

1  -  207

 

 

Pi

197.668524

Theta

198.208861

Tajima's D

-0.354259

CLR

1.095049

CSRT

0.27943602819859

Interpretation

Uncertain