Silkworm Genome Informatics Database

Gene

KWMTBOMO13150

Pre Gene Modal

BGIBMGA000335

Annotation

_putative_cuticle_protein_[Bombyx_mori]

Location

Bomo_Chr22(+):9204513-9206659 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.409

CDS

ATGCACGTTCTTGCCGCGCCCCGTCATAGGGATGTTCCTTTAGAGAGACAGCAGCCTACGGTGATACCGATCGTGTCTCAGTCAGAAGAGTACGATCCTAGTGGAGCTTATAGATTTAGTTACGAGACAGGCAACGGTATCAAACGGGAGGAAGCAGCATTTGACAAAGTATTGCCGAAGAGCTCAGCGCGAGTTGCCAGTAATAGTGACGAAAGTGGCGAGAGCAGTGAGAGTGACGAAAGTGATGAAATTCATGTTCAAAAGGGATCCTACTCCTACACAGCACCAGATGGCACACTAATTACTGTCAAGTATATAGCTGATGAAAATGGTTTTCGCCCGACAATAATTCAAAGCTCAAAGAATTCCGGAGAGATACAATTTACATCAAGTGTAAGTGAGAAGACTGGAAGAGTATTAAAGCCTACCGATAATGAAGAAGTTGGCTCAGCACCTCCAGCAGCCATATCCCAACCACCAGCATTAGGTCCCGTACCAGTCATTGATTCAAGAATTGCAAGTCCTTCCGCTGAAGAATCAGAACCAATTGAAGCTGAGCCATCCAAGCTTCAAACCTCATCTGAGGAATCTATAGAGTCTGTGCCATCTGTTCCCGCTTCACAATCACCTGTTACCGAGAAAATATTAGAGCAAAGCGCTGTTTCTCCGGCTACTTCAGAATCAAAAGAAACAGTACCAGAATTGTCTTCAAGTTCTACTGAAACTTTACCATCTTCAAGTTCCATTCCAACTGCAGAAGAAACTGGCACTCAAACTTCAGAGCAATCTGTTTCTGAGCCGACATCAACAGTGACGTCTTCTGAGCCGACTTCAATTCCTAAGCTGGAGTCTTCTACTATAGCTGAGACCACGACCGCCTCTATAAGTTCCTCCCAAACTCAGGAAATTACAACAGCCCAACTTACTACTACCTCTTCGGCAGCTACGCCTGAGGCTGTAAATTCTTCCACTGATTTATCATCAACAAGTACTCCTTCAGAAAGTTCGTCTTCAGAACTACCTTCAACTGTAGCAGTAGTTACTGAAAATACTTCAACAGTGACGTCAGTGCCAACTTCTGTTCCAAGTGAAACAACGATTACAAATACCCCAGTAACAACAGATTCAGGATCCAGTGAAACGCCTACTGCAATCACCGAGGCTTTAACTGATTTAAGTTCAACCACCTCAGAGCCCATCTCCACCGAAGCCGTCTCGACAACTGTTGTACAAGATATACCGTCCTCAACACTAGCAGTCACTACCACGGAAATTGTCTCAGAAAGCACGTCGGAAACGAGTACCTCTCAAGTTACAGTAAGTGATTTAATTAATGAATCAGCTTCAACTGTTACTGGTCAGGAAACTTCAGAAGCAACTTCAACGATTGTTCCAACCAAAGATACAACAGCGCTAACATCGACTAGCTTACCTGATGATGCTGTGGTAACTAGTCAAGAGGTTACATCAACAGAAACCATTTCTACTACCACAACGTAA

Protein

MHVLAAPRHRDVPLERQQPTVIPIVSQSEEYDPSGAYRFSYETGNGIKREEAAFDKVLPKSSARVASNSDESGESSESDESDEIHVQKGSYSYTAPDGTLITVKYIADENGFRPTIIQSSKNSGEIQFTSSVSEKTGRVLKPTDNEEVGSAPPAAISQPPALGPVPVIDSRIASPSAEESEPIEAEPSKLQTSSEESIESVPSVPASQSPVTEKILEQSAVSPATSESKETVPELSSSSTETLPSSSSIPTAEETGTQTSEQSVSEPTSTVTSSEPTSIPKLESSTIAETTTASISSSQTQEITTAQLTTTSSAATPEAVNSSTDLSSTSTPSESSSSELPSTVAVVTENTSTVTSVPTSVPSETTITNTPVTTDSGSSETPTAITEALTDLSSTTSEPISTEAVSTTVVQDIPSSTLAVTTTEIVSESTSETSTSQVTVSDLINESASTVTGQETSEATSTIVPTKDTTALTSTSLPDDAVVTSQEVTSTETISTTTT

Uniprot

C0H6M7

Pubmed

19121390 19280704

EMBL

BABH01013059 BR000536 FAA00538.1

Proteomes

UP000005204

PRIDE

C0H6M7

Pfam

PF00379 Chitin_bind_4

Interpro

IPR000618 Insect_cuticle + More
IPR031311 CHIT_BIND_RR_consensus

ProteinModelPortal

C0H6M7

KEGG

101744624 no KO assigned | (RefSeq) cell wall protein RBR3-like

GO

GO:0042302 GO:0008270 GO:0006260 GO:0003824 GO:0005634 GO:0005737 GO:0048869 GO:0003676 GO:0016491 GO:0015930

Length:

499

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00322

outside

1 - 499

Pi

279.714904

Theta

209.554618

Tajima's D

1.039434

CLR

0.135451

CSRT

0.670816459177041

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics