Gene

KWMTBOMO13146  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000333

Annotation

larval_cuticle_protein_LCP-22_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):9152171-9153650      View in EpiBrowser

Full name

Larval cuticle protein LCP-22      

Location in the cell

Extracellular   Reliability : 1.385 PlasmaMembrane   Reliability : 1.074

CDS

ATGAAATTCGCAGTAGTATTCGCTTGCATGGTGGCAGCGGTTGCCGCCCAAGTCCGGTATGAAAATGAATTCTACAAGAAGAACCCATACCGGTACAGCACATACCGGCCGTTCGTTTCCGTGACCACTCCTACTCCGTTTCTGCCTATCCCGATCTCCTCTGTTGCCCCCGTCAGAGTAGTACCCAAGGTATCTGAGGGTTACGGCGCTGAGACTGTCAAATTCGGAAATGAAATCAACCCCGACGGTTCCTACACCTACTTCTACGAAACCAACAACGGTATCGCTGCCCAAGAACAGGGAGTTCCCCGTAACCTTGGTGGAAACCCCCCTGCTGTTCCCGTCGTTGCACAGGGCTCATTCTCCTGGACATCTCCTGAAGGTGTTCCCATCAGCGTCAATTACGTCGCCGACGAGAATGGATACCAGCCCACTGGTAATGCTATCCCCACTTCCCCACCAGTGCCTGAGCAGATCGCTCGTGCTCTTGCCTACATCGCCAAGAACATTCCTCTCAAGAAGTAA

Protein

MKFAVVFACMVAAVAAQVRYENEFYKKNPYRYSTYRPFVSVTTPTPFLPIPISSVAPVRVVPKVSEGYGAETVKFGNEINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQIARALAYIAKNIPLKK

Keywords

Complete proteome   Cuticle   Reference proteome   Signal  

Feature

chain  Larval cuticle protein LCP-22

Uniprot

C0H6N0   O02388   A0A0K8TIF5   A0A2H1WMU1   I4DIF3   A0A194PY06   + More
A0A0L7KWZ1   I4DLW7   A0A194R1H8   B3NCP1   A0A0J9RT06   Q4QPY2   R4FKX5   T1I377   Q9VTC8   R4G2S2   B4PEI4   B4HDS6   A0A182KCU6   A0A0P5HGX2   A0A0P5P894   A0A0P5D9Q3   A0A0N8DFX6   A0A0P6CRG6   A0A0P5G9Z9   A0A0P5XVB8   A0A0P5P1F2   A0A0P5M470   A0A0P5BL16   A0A0P5NXW7   A0A0N8CP98   A0A0P4YLS0   A0A0P6GRV8   A0A0P4Z3U5  

Pubmed

19280704    9443370    22651552    26354079    26227816    17994087    + More
22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304   

EMBL

KM027248    BR000539    AIU94617.1    FAA00541.1    AB004767    GBRD01000901    + More
JAG64920.1    ODYU01009753    SOQ54393.1    AK401071    BAM17693.1    KQ459586    KPI97908.1    JTDY01004881    KOB67640.1    AK402285    BAM18907.1    KQ460883    KPJ11374.1    CH954178    EDV51338.1    CM002912    KMY98893.1    KMY98894.1    BT023634    AAY85034.1    GAHY01002329    JAA75181.1    ACPB03023185    AE014296    KX531538    AAF50124.1    ANY27348.1    GAHY01002351    JAA75159.1    CM000159    EDW94050.1    CH480815    EDW41016.1    GDIQ01233666    JAK18059.1    GDIQ01136553    JAL15173.1    GDIP01159140    JAJ64262.1    GDIP01037639    JAM66076.1    GDIQ01088568    JAN06169.1    GDIQ01245366    JAK06359.1    GDIP01066772    JAM36943.1    GDIQ01136554    JAL15172.1    GDIQ01162441    GDIQ01161089    JAK90636.1    GDIP01183554    JAJ39848.1    GDIQ01157639    JAK94086.1    GDIP01112263    GDIQ01080564    JAL91451.1    JAN14173.1    GDIP01226004    JAI97397.1    GDIQ01187831    GDIQ01039839    JAN54898.1    GDIP01219852    JAJ03550.1   

Proteomes

UP000005204    UP000053268    UP000037510    UP000053240    UP000008711    UP000015103    + More
UP000000803    UP000002282    UP000001292    UP000075881   

PRIDE

O02388    Q4QPY2    Q9VTC8   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6N0   O02388   A0A0K8TIF5   A0A2H1WMU1   I4DIF3   A0A194PY06   + More
A0A0L7KWZ1   I4DLW7   A0A194R1H8   B3NCP1   A0A0J9RT06   Q4QPY2   R4FKX5   T1I377   Q9VTC8   R4G2S2   B4PEI4   B4HDS6   A0A182KCU6   A0A0P5HGX2   A0A0P5P894   A0A0P5D9Q3   A0A0N8DFX6   A0A0P6CRG6   A0A0P5G9Z9   A0A0P5XVB8   A0A0P5P1F2   A0A0P5M470   A0A0P5BL16   A0A0P5NXW7   A0A0N8CP98   A0A0P4YLS0   A0A0P6GRV8   A0A0P4Z3U5  

KEGG

692363    no KO assigned | (RefSeq) CPR38, BmorCPR38, LCP22; cuticular protein RR-1 motif 38

GO

GO:0042302   GO:0032504   GO:0031012   GO:0008010   GO:0005615   GO:0040003   GO:0016021   GO:0008270   GO:0006260   GO:0003824   GO:0005634   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

SignalP

Position:   1 - 16,         Likelihood:  0.993492

 

 

Length:

174

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.83953

Exp number, first 60 AAs:

0.83752

Total prob of N-in:

0.12295

outside

1  -  174

 

 

Pi

154.160325

Theta

131.622206

Tajima's D

0.464917

CLR

0.000278

CSRT

0.504224788760562

Interpretation

Uncertain