Gene

KWMTBOMO13144

Pre Gene Modal

BGIBMGA000331

Annotation

cuticular_protein_RR-1_motif_40_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):9130011-9133952      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.787

CDS

ATGTACATTAAAAGATATGGAACAATAGTGGGGTCATTCGTAGTGGCTACCTGCTCACTCTTGGTATCCAGGAGTCAAGCTCAAGACGATGGAAAATACAGGCCAGAGATTTACGGCGACGGGAGTTATTACCCAACGAACGATGGAAAGTACATCAATAGTTTTGATGGACGGTACAGGAGCCTACTCAACAGAAATAGCAAATACCAATCGATCTACAACGCGTATCAGCCATATTACGCTAAGGCGCTGAATCAACAACTGTTGACTCCTTTCGTCAAGTACGGAAATGGTATTGAACAGACCGCAGAACCTTCTGTTGCTACTGTAACCTATCGCCCTCCAGTCGTATCGACATACCGTCCCTTAGTCTACTCATCGACCGTCAAGCCATTGGCTTACAGAACTCAATATGTGAACGACGGATCAGCAAATATAATACGGCAAGATAACGATGTTGACGTCAATGCATATCATTTCGCTTATGAAACGGATAATGGGATCGCTGCTGAAGAATCTGGGAGCGTTGAACCGACAGTAAACGGTGGTGGTACCAGAACAAGGGGTTTTTACGAGTACGTTGGCGATGATGGTTTGAAGTACAGGGTCGACTATACCGCCGACGAGAACGGCTTCAAGCCCGTCGGCGCGCATTTACCTTGA

Protein

MYIKRYGTIVGSFVVATCSLLVSRSQAQDDGKYRPEIYGDGSYYPTNDGKYINSFDGRYRSLLNRNSKYQSIYNAYQPYYAKALNQQLLTPFVKYGNGIEQTAEPSVATVTYRPPVVSTYRPLVYSSTVKPLAYRTQYVNDGSANIIRQDNDVDVNAYHFAYETDNGIAAEESGSVEPTVNGGGTRTRGFYEYVGDDGLKYRVDYTADENGFKPVGAHLP

Uniprot

C0H6N2   H9ISV4   A0A0L7LE58   A0A194R297   A0A2H1W4F5   A0A194PX58   + More
I4DJF3   I4DMR4   A0A212EXZ4   B4NN97   A0A1W4UH84   D6WNK7   A0A0A1XFB6   A0A1B0GJ98   A0A182X792   A0A182HRK7   A0A182Q4V5   B4J725   A0A0A1XK74   A0A0M4ECS7   A0A182NUJ4   T1DU98   B0WRB8   A0A2A4IY95   A0A3S2LIA4   A0A182KTN5   A0A1Q3FNL5   A0A1I8MYV1   A0A1Y1LJV8   W5JPT7   Q5MGQ2   A0A1B0D630   A0A2H1VC81   Q2F6B8   A0A290Y5I6   C0H6J2   A0A1W4XDU8   A0A194PXP5   A0A1I8Q1P4   I4DIF4   A0A182KDF3   I4DMC9  

Pubmed

19280704    19121390    26227816    26354079    22651552    22118469    + More
17994087    18362917    19820115    25830018    20966253    25315136    28004739    20920257    23761445    16023793   

EMBL

BR000541    FAA00543.1    BABH01013066    JTDY01001457    KOB73823.1    KQ460883    + More
KPJ11375.1    ODYU01006245    SOQ47913.1    KQ459586    KPI97907.1    AK401421    BAM18043.1    AK402582    BAM19204.1    AGBW02011684    OWR46314.1    CH964282    EDW85836.2    KQ971343    EFA03214.1    GBXI01004640    JAD09652.1    AJWK01019933    AJWK01019934    APCN01001715    AXCN02002061    CH916367    EDW01013.1    GBXI01002965    JAD11327.1    CP012524    ALC41590.1    GAMD01000344    JAB01247.1    DS232054    EDS33308.1    NWSH01004886    PCG64609.1    RSAL01000005    RVE54429.1    GFDL01005921    JAV29124.1    GEZM01055178    JAV73098.1    ADMH02000458    ETN66397.1    AY829734    AAV91348.1    AJVK01025683    ODYU01001779    SOQ38453.1    DQ311154    ABD36099.1    MF318875    ATD87261.1    BABH01014207    BR000502    FAA00503.1    KQ459589    KPI97529.1    AK401072    BAM17694.1    AK402447    BAM19069.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000053268    UP000007151    UP000007798    + More
UP000192221    UP000007266    UP000092461    UP000076407    UP000075840    UP000075886    UP000001070    UP000092553    UP000075884    UP000002320    UP000218220    UP000283053    UP000075882    UP000095301    UP000000673    UP000092462    UP000192223    UP000095300    UP000075881   

PRIDE

C0H6N2    H9ISV4    Q2F6B8    C0H6J2   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6N2   H9ISV4   A0A0L7LE58   A0A194R297   A0A2H1W4F5   A0A194PX58   + More
I4DJF3   I4DMR4   A0A212EXZ4   B4NN97   A0A1W4UH84   D6WNK7   A0A0A1XFB6   A0A1B0GJ98   A0A182X792   A0A182HRK7   A0A182Q4V5   B4J725   A0A0A1XK74   A0A0M4ECS7   A0A182NUJ4   T1DU98   B0WRB8   A0A2A4IY95   A0A3S2LIA4   A0A182KTN5   A0A1Q3FNL5   A0A1I8MYV1   A0A1Y1LJV8   W5JPT7   Q5MGQ2   A0A1B0D630   A0A2H1VC81   Q2F6B8   A0A290Y5I6   C0H6J2   A0A1W4XDU8   A0A194PXP5   A0A1I8Q1P4   I4DIF4   A0A182KDF3   I4DMC9  

KEGG

100379428    no KO assigned | (RefSeq) CPR40, BmorCPR40; cuticular protein RR-1 motif 40

GO

GO:0042302   GO:0008270   GO:0006260   GO:0003824   GO:0005634   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

SignalP

Position:   1 - 27,         Likelihood:  0.957088

 

 

Length:

220

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.75298000000001

Exp number, first 60 AAs:

2.75204

Total prob of N-in:

0.25434

outside

1  -  220

 

 

Pi

215.832746

Theta

148.768608

Tajima's D

1.446353

CLR

2.12336

CSRT

0.772561371931403

Interpretation

Uncertain