Gene
KWMTBOMO13141 Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000329
Annotation
_putative_cuticle_protein_[Bombyx_mori]
Full name
Larval cuticle protein LCP-30
Location in the cell
Extracellular Reliability : 1.659
Sequence
CDS
ATGCGTGTCTTTTTGGCAATCTGCCTGTCTCTGACAGTGGCGCTGGCCGCCGAAACTGGAAAGTACACTCCTTTCCAGTACAACCGAGTTTACTCTACTGTTTCTCCATTCGTCTATAAGCCAGGCCGCTATGTAGCTGATCCAGGCCGTTATGACCCCAGCCGCGACAACTCTGGCCGTTACATTCCCGACAACTCTGGTGCCTACAACGGTGACCGTGGAGACCGTGGTGCCGCCGGTGGCTTCTACACTGGATCCGGTACTGCTGGAGGTCCCGGAGGAGCCTACGTCGGAACCAAGGAGGACCTCAGCAAATACCTTGGTGATGCTTACAAGGGATCCAGCATTGTTCCCCTGCCCGTCGTGAAGCCTACCATTCCCGTGCCAGTCACACCCACATACGTTGCCAGCAAGGTGGTCACACCCACATACGTTGCCAGCAAGGTGGTCCCACCCAGCGGCGCCGGCTACGACTACAAATACGGCATCATCCGTTACGACAATGACGTCGCTCCCGAAGGCTACCACTACTTGTACGAGACCGAGAACAAGATTCTCGCTGAAGAAGCCGGCAAGGTCGAGAATGTCGGCACCGAAAACGAAGGCATCAAGGTCAAGGGATTCTACGAATACGTTGGCCCCGACGGTGTCACCTACAGAGTAGACTACACTGCTGACGAAAACGGTTTCGTTGCTGACGGAGCTCACATCCCTAAGTAA
Protein
MRVFLAICLSLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYNGDRGDRGAAGGFYTGSGTAGGPGGAYVGTKEDLSKYLGDAYKGSSIVPLPVVKPTIPVPVTPTYVASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYETENKILAEEAGKVENVGTENEGIKVKGFYEYVGPDGVTYRVDYTADENGFVADGAHIPK
Summary
Keywords
Complete proteome
Cuticle
Direct protein sequencing
Reference proteome
Signal
Feature
chain Larval cuticle protein LCP-30
Proteomes
Pfam
PF00379 Chitin_bind_4
Ontologies
GO
Topology
SignalP
Position: 1 - 16,
Likelihood: 0.999491
Length:
239
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.41255
Exp number, first 60 AAs:
0.35714
Total prob of N-in:
0.03936
outside
1 - 239
Population Genetic Test Statistics
Pi
195.241663
Theta
169.562225
Tajima's D
0.542912
CLR
0.416509
CSRT
0.525523723813809
Interpretation
Uncertain
