Gene

KWMTBOMO13139

Pre Gene Modal

BGIBMGA000327

Annotation

cuticular_protein_RR-1_motif_43_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):9068721-9069787      View in EpiBrowser

Full name

Larval cuticle protein LCP-17      

Location in the cell

Extracellular   Reliability : 2.641

CDS

ATGAAGACCTTTGTTATTCTCTTCGGACTTGTGACGGTCGCGGTAGCTGCACCCCAATCACCTACTGAACCCATCCCGATCCTGAAGCAGGAGAGCAGCATCGAGCCTGATGGGTCCTACCAATACTCTTATGAGACTGGAAATGGTATCTCCGCTGCCGAGCGAGGCGCTCTCAAAAACATCGGCGCTGAAGAACCTGCTTTACAGGTTGAAGGTCAATTCCAGTACCCAAGCGAGGACGGTGGTACTATCCAGTTGTCCTACATCGCCAATGAGAACGGCTTCCAGCCTCAGGGATCACATTTACCCACACCACCCCCAATTCCTGAAGTCATCCAGCGCGCTCTCGCATACCTCGCCACCGCACCCCCACAGCCTGAAAACAACAGGCCATAA

Protein

MKTFVILFGLVTVAVAAPQSPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEGQFQYPSEDGGTIQLSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPENNRP

Keywords

Complete proteome   Cuticle   Reference proteome   Signal  

Feature

chain  Larval cuticle protein LCP-17

Uniprot

C0H6N5   A0A2H1VDB8   G8FVP6   A0A194PX52   A0A194R2A2   A0A212F0G5   + More
A0A212F0M0   A0A194PX20   A0A194R690   C0H6N6   A0A2H1VDH2   A0A1W4XN34   A0A1W4XNY4   A0A194Q3B6   A0A2A4J2S0   A0A2A4IU20   V5IB19   T1P8T8   F4X6E9   A0A194R101   A0A195DX36   D6WP14   A0A158NJP8   A0A2J7R753   A0A2H1VDC4   A0A1I8NPH7   A0A2H1X3S9   A0A151X6A2   A0A0T6BD43   A0A195BBN7   C0H6M4   A0A212F0I8   Q9BPR1   Q17G30   A0A195FN03   A0A182MFL3   H9J6Y5   A0A182IU01   E9IFV0   W0GHP6   O02387   A0A182IL85   C0H6J3   A0A0T6BG89   A0A2A4J2I4   B2DBG7   A0A182QNQ5   A0A336MJ94   A0A158NFL8   E2B0E6   A0A182QGA7   A0A182S6R8   A0A194Q7B5   A0A2S1ZS73   A0A1J1ILD8   A0A336LRL8   G8FVQ1   A0A0L7QW49   Q290D7   A0A1B0D633   A0A0N1PIW1   A0A182MIF1   A0A182YDM4   D6WNV0   A0A0L7LBG3   A0A194R0P7   A0A182RHG2   F4X6E7   A0A2P8Y5M5   A0A232FDH9   K7J4G1   A0A195D5A8   A0A088A4U8   A0A2A3EJ46   A0A232FDB1   Q7Q1A8   A0A0K8UZ57   A0A182KTN1   A0A0A1WLS1   A0A1J1II08   A0A195D5C7   A0A154P9J5   A0A182UZ29   A0A182KTN8   A0A182X793   Q7PM44   A0A2A4IY21   A0A182U3Y3   A0A182KCU6   B4GCE4   A0A182VEM2   A0A067R439   A0A151J736   A0A1S4N1V2   A0A182TXD1   A0A1B6GX67   A0A1W4XDV2   A0A2S1ZS74   E2BGZ6   E0W3K9  

Pubmed

19121390    19280704    26354079    22118469    25315136    21719571    + More
18362917    19820115    21347285    11483438    17510324    21282665    24514903    9443370    18712529    20798317    29712872    15632085    17994087    25244985    26227816    29403074    28648823    20075255    12364791    14747013    17210077    20966253    25830018    24845553    20566863   

EMBL

BABH01013076    BR000544    FAA00546.1    ODYU01001934    SOQ38825.1    JN082716    + More
AER27814.1    KQ459586    KPI97902.1    KQ460883    KPJ11380.1    AGBW02011079    OWR47245.1    OWR47244.1    KPI97901.1    KPJ11381.1    BR000545    FAA00547.1    SOQ38826.1    KPI97900.1    NWSH01003794    PCG65814.1    NWSH01007872    PCG62774.1    GALX01000205    JAB68261.1    KA644545    AFP59174.1    GL888812    EGI57989.1    KPJ11382.1    KQ980155    KYN17460.1    KQ971343    EFA04420.1    ADTU01018177    NEVH01006738    PNF36675.1    SOQ38827.1    ODYU01013214    SOQ59908.1    KQ982482    KYQ55916.1    LJIG01001715    KRT85225.1    KQ976526    KYM81953.1    BABH01013051    BABH01013052    BR000533    FAA00535.1    OWR47243.1    AB047488    BR000546    BAB32485.1    FAA00548.1    CH477267    EAT45440.1    KQ981424    KYN41853.1    AXCM01002738    BABH01028447    GL762903    EFZ20561.1    KF672849    AHF55751.1    AB004766    BR000503    FAA00504.1    LJIG01000626    KRT86314.1    NWSH01003986    PCG65593.1    AB264646    BAG30726.1    AXCN02002061    UFQT01001422    SSX30494.1    ADTU01014660    GL444552    EFN60841.1    KQ459580    KPI99295.1    MF942789    AWK28312.1    CVRI01000054    CRK99894.1    UFQT01000134    SSX20662.1    JN082721    AER27818.1    KQ414716    KOC62801.1    CM000071    EAL25425.3    AJVK01025685    KQ460571    KPJ13960.1    EFA03208.2    JTDY01001912    KOB72556.1    KPJ11368.1    EGI57987.1    PYGN01000899    PSN39557.1    NNAY01000425    OXU28499.1    KQ976818    KYN08085.1    KZ288251    PBC31051.1    OXU28500.1    AAAB01008980    EAA14443.4    GDHF01020357    JAI31957.1    GBXI01014661    JAC99630.1    CRK99895.1    KYN08082.1    KQ434835    KZC07898.1    EAA14379.5    NWSH01005682    PCG64060.1    CH479181    EDW32421.1    KK852994    KDR12717.1    KQ979748    KYN19356.1    AAZO01007414    GECZ01002760    JAS67009.1    MF942790    AWK28313.1    GL448255    EFN85029.1    DS235882    EEB20215.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000192223    UP000218220    + More
UP000095301    UP000007755    UP000078492    UP000007266    UP000005205    UP000235965    UP000095300    UP000075809    UP000078540    UP000008820    UP000078541    UP000075883    UP000075880    UP000075886    UP000000311    UP000075901    UP000183832    UP000053825    UP000001819    UP000092462    UP000076408    UP000037510    UP000075900    UP000245037    UP000215335    UP000002358    UP000078542    UP000005203    UP000242457    UP000007062    UP000075882    UP000076502    UP000075903    UP000076407    UP000075902    UP000075881    UP000008744    UP000027135    UP000008237    UP000009046   

PRIDE

C0H6N6    H9J6Y5    O02387    C0H6J3   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       

ProteinModelPortal

C0H6N5   A0A2H1VDB8   G8FVP6   A0A194PX52   A0A194R2A2   A0A212F0G5   + More
A0A212F0M0   A0A194PX20   A0A194R690   C0H6N6   A0A2H1VDH2   A0A1W4XN34   A0A1W4XNY4   A0A194Q3B6   A0A2A4J2S0   A0A2A4IU20   V5IB19   T1P8T8   F4X6E9   A0A194R101   A0A195DX36   D6WP14   A0A158NJP8   A0A2J7R753   A0A2H1VDC4   A0A1I8NPH7   A0A2H1X3S9   A0A151X6A2   A0A0T6BD43   A0A195BBN7   C0H6M4   A0A212F0I8   Q9BPR1   Q17G30   A0A195FN03   A0A182MFL3   H9J6Y5   A0A182IU01   E9IFV0   W0GHP6   O02387   A0A182IL85   C0H6J3   A0A0T6BG89   A0A2A4J2I4   B2DBG7   A0A182QNQ5   A0A336MJ94   A0A158NFL8   E2B0E6   A0A182QGA7   A0A182S6R8   A0A194Q7B5   A0A2S1ZS73   A0A1J1ILD8   A0A336LRL8   G8FVQ1   A0A0L7QW49   Q290D7   A0A1B0D633   A0A0N1PIW1   A0A182MIF1   A0A182YDM4   D6WNV0   A0A0L7LBG3   A0A194R0P7   A0A182RHG2   F4X6E7   A0A2P8Y5M5   A0A232FDH9   K7J4G1   A0A195D5A8   A0A088A4U8   A0A2A3EJ46   A0A232FDB1   Q7Q1A8   A0A0K8UZ57   A0A182KTN1   A0A0A1WLS1   A0A1J1II08   A0A195D5C7   A0A154P9J5   A0A182UZ29   A0A182KTN8   A0A182X793   Q7PM44   A0A2A4IY21   A0A182U3Y3   A0A182KCU6   B4GCE4   A0A182VEM2   A0A067R439   A0A151J736   A0A1S4N1V2   A0A182TXD1   A0A1B6GX67   A0A1W4XDV2   A0A2S1ZS74   E2BGZ6   E0W3K9  

KEGG

100379426    no KO assigned | (RefSeq) CPR43, BmorCPR43; cuticular protein RR-1 motif 43

GO

GO:0042302   GO:0016021   GO:0005664   GO:0006260   GO:0003824   GO:0005634   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

SignalP

Position:   1 - 16,         Likelihood:  0.997800

 

 

Length:

131

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.28959

Exp number, first 60 AAs:

0.28959

Total prob of N-in:

0.04704

outside

1  -  131

 

 

Pi

207.870231

Theta

168.146589

Tajima's D

0.743063

CLR

30.904674

CSRT

0.586220688965552

Interpretation

Uncertain