Gene

KWMTBOMO13138

Pre Gene Modal

BGIBMGA000326

Annotation

cuticular_protein_RR-1_motif_44_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):9058061-9059039      View in EpiBrowser

Full name

Endocuticle structural glycoprotein SgAbd-2       + More
Endocuticle structural glycoprotein SgAbd-8      

Location in the cell

Extracellular   Reliability : 2.188

CDS

ATGAAATCTATTGTGTTGGTTTCTATGCTGGTCGCAGTGGCCTTGGCCGCGCCTCAGGGGCCCACCGAGCCTATCCCAATTGTTCGTGACGACAGCCAAATCAACGGCGACGGGTCATACCAGTACGCTTTCGAAACCGGCAACGGTATTAGCGCTGACCAGAAGGGTGAACTGAAGAAGGTTGGCGACGTTGAGGCTCTCGAAGTTCAGGGCGAATTCAAATATCCCGGAGAAAACGGTCAGGACATCTCTCTGACCTACACGGCTGATGAGAATGGCTTCCATCCATCCGGCAGCCACTTGCCAACCAGTCCCCCAATCCCGGAAGCCATCCAGCGCGCTCTCGACTTCATCGCCACCGCCCCTCCTGCCCCTGCAGCCGCTGCCGCACAATAG

Protein

MKSIVLVSMLVAVALAAPQGPTEPIPIVRDDSQINGDGSYQYAFETGNGISADQKGELKKVGDVEALEVQGEFKYPGENGQDISLTYTADENGFHPSGSHLPTSPPIPEAIQRALDFIATAPPAPAAAAAQ

Keywords

Cuticle   Direct protein sequencing   Glycoprotein   Pyrrolidone carboxylic acid  

Feature

chain  Endocuticle structural glycoprotein SgAbd-2

Uniprot

C0H6N6   A0A194PX20   A0A2H1VDH2   A0A194R690   A0A212F0M0   A0A194PX52   + More
A0A194R2A2   A0A2H1VDB8   C0H6N5   A0A212F0G5   G8FVP6   A0A1W4XNY4   A0A1W4XN34   A0A2J7R753   A0A182QNQ5   A0A182IL85   D6WFI5   A0A2A4J2I4   A0A1W4XP69   A0A182S6R8   A0A2H1X3S9   Q9BPR1   V5IB19   A0A182MFL3   A0A232FDH9   K7J4G1   G8FVQ1   A0A194Q3B6   A0A1I8NPH7   A0A2A4J2S0   A0A2A4IU20   A0A2H1VDC4   A0A0T6BD43   A0A2H1W3T6   A0A182RHG2   Q7Q1A8   C0H6M4   A0A182KTN1   A0A182U3Y3   A0A1S4N1V2   A0A194R0P7   A0A182VEM2   A0A182KCU6   E0W3K9   Q17G29   A0A212F0I8   T1P8T8   D6WFI1   D6WFI6   D6WFI2   A0A1W4XDV2   A0A194R101   A0A1S4F436   D6WNV0   E9IFU9   A0A2P8XYP8   A0A1B0DG98   A0A3S2N9Y2   A0A2H1W3Z0   Q7M4F3   B0WRB7   A0A2J7R6Z4   I4DIE4   B4LHG0   F4X6E7   A0A182F693   G8FVP9   A0A182WGU5   A0A195DXL6   A0A2P8Y0M8   A0A222NT99   C0H6J9   H9JBX0   Q7M4F2   A0A182X792   A0A2R7WSK8   A0A182MIF1   R4G3X3   A0A0L7QW49   A0A1S3DGD9   A0A1J1ILD8   A0A1L8E3U5   A0A158NJP7   A0A195BCK5   A0A2A3EJ46   E2BGZ6   A0A182IU01   A0A1L8E3R2   Q17G30   A0A1B6GX67   A0A151X6J9   A0A2J7R701   A0A182YDM7   A0A182HRK7   A0A195D5B9   A0A1W4XP64   N6TWE4  

Pubmed

19121390    19280704    26354079    22118469    18362917    19820115    + More
11483438    28648823    20075255    12364791    14747013    17210077    20966253    20566863    17510324    25315136    21282665    29403074    9692242    22651552    17994087    21719571    21347285    20798317    25244985    23537049   

EMBL

BABH01013076    BR000545    FAA00547.1    KQ459586    KPI97901.1    ODYU01001934    + More
SOQ38826.1    KQ460883    KPJ11381.1    AGBW02011079    OWR47244.1    KPI97902.1    KPJ11380.1    SOQ38825.1    BR000544    FAA00546.1    OWR47245.1    JN082716    AER27814.1    NEVH01006738    PNF36675.1    AXCN02002061    KQ971327    EFA00928.1    NWSH01003986    PCG65593.1    ODYU01013214    SOQ59908.1    AB047488    BR000546    BAB32485.1    FAA00548.1    GALX01000205    JAB68261.1    AXCM01002738    NNAY01000425    OXU28499.1    JN082721    AER27818.1    KPI97900.1    NWSH01003794    PCG65814.1    NWSH01007872    PCG62774.1    SOQ38827.1    LJIG01001715    KRT85225.1    ODYU01006154    SOQ47759.1    AAAB01008980    EAA14443.4    BABH01013051    BABH01013052    BR000533    FAA00535.1    AAZO01007414    KPJ11368.1    DS235882    EEB20215.1    CH477267    EAT45441.1    OWR47243.1    KA644545    AFP59174.1    EFA00924.1    EFA00929.1    EFA00925.1    KPJ11382.1    KQ971343    EFA03208.2    GL762903    EFZ20555.1    PYGN01001152    PSN37138.1    AJVK01059427    RSAL01000374    RVE42117.1    SOQ47758.1    DS232054    EDS33307.1    PNF36608.1    AK401062    BAM17684.1    KPI97914.1    CH940647    EDW68490.2    GL888812    EGI57987.1    JN082719    AER27816.1    KQ980155    KYN17457.1    PYGN01001077    PSN37817.1    KX503041    ASQ42727.1    BR000509    FAA00510.1    BABH01014839    KK855351    PTY22120.1    GAHY01001845    JAA75665.1    KQ414716    KOC62801.1    CVRI01000054    CRK99894.1    GFDF01000889    JAV13195.1    ADTU01018174    KQ976526    KYM81952.1    KZ288251    PBC31051.1    GL448255    EFN85029.1    GFDF01000723    JAV13361.1    EAT45440.1    GECZ01002760    JAS67009.1    KQ982482    KYQ55918.1    PNF36609.1    APCN01001715    KQ976818    KYN08083.1    APGK01052420    KB741212    ENN72716.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000192223    UP000235965    + More
UP000075886    UP000075880    UP000007266    UP000218220    UP000075901    UP000075883    UP000215335    UP000002358    UP000095300    UP000075900    UP000007062    UP000075882    UP000075902    UP000075903    UP000075881    UP000009046    UP000008820    UP000095301    UP000245037    UP000092462    UP000283053    UP000002320    UP000008792    UP000007755    UP000069272    UP000075920    UP000078492    UP000076407    UP000053825    UP000079169    UP000183832    UP000005205    UP000078540    UP000242457    UP000008237    UP000075809    UP000076408    UP000075840    UP000078542    UP000019118   

PRIDE

C0H6N6    Q7M4F3    C0H6J9    H9JBX0   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6N6   A0A194PX20   A0A2H1VDH2   A0A194R690   A0A212F0M0   A0A194PX52   + More
A0A194R2A2   A0A2H1VDB8   C0H6N5   A0A212F0G5   G8FVP6   A0A1W4XNY4   A0A1W4XN34   A0A2J7R753   A0A182QNQ5   A0A182IL85   D6WFI5   A0A2A4J2I4   A0A1W4XP69   A0A182S6R8   A0A2H1X3S9   Q9BPR1   V5IB19   A0A182MFL3   A0A232FDH9   K7J4G1   G8FVQ1   A0A194Q3B6   A0A1I8NPH7   A0A2A4J2S0   A0A2A4IU20   A0A2H1VDC4   A0A0T6BD43   A0A2H1W3T6   A0A182RHG2   Q7Q1A8   C0H6M4   A0A182KTN1   A0A182U3Y3   A0A1S4N1V2   A0A194R0P7   A0A182VEM2   A0A182KCU6   E0W3K9   Q17G29   A0A212F0I8   T1P8T8   D6WFI1   D6WFI6   D6WFI2   A0A1W4XDV2   A0A194R101   A0A1S4F436   D6WNV0   E9IFU9   A0A2P8XYP8   A0A1B0DG98   A0A3S2N9Y2   A0A2H1W3Z0   Q7M4F3   B0WRB7   A0A2J7R6Z4   I4DIE4   B4LHG0   F4X6E7   A0A182F693   G8FVP9   A0A182WGU5   A0A195DXL6   A0A2P8Y0M8   A0A222NT99   C0H6J9   H9JBX0   Q7M4F2   A0A182X792   A0A2R7WSK8   A0A182MIF1   R4G3X3   A0A0L7QW49   A0A1S3DGD9   A0A1J1ILD8   A0A1L8E3U5   A0A158NJP7   A0A195BCK5   A0A2A3EJ46   E2BGZ6   A0A182IU01   A0A1L8E3R2   Q17G30   A0A1B6GX67   A0A151X6J9   A0A2J7R701   A0A182YDM7   A0A182HRK7   A0A195D5B9   A0A1W4XP64   N6TWE4  

KEGG

100379425    no KO assigned | (RefSeq) CPR44, BmorCPR44; cuticular protein RR-1 motif 44

GO

GO:0042302   GO:0016021   GO:0005664   GO:0006260   GO:0003824   GO:0005634   GO:0005737   GO:0048869   GO:0003676   GO:0016491   GO:0015930  

SignalP

Position:   1 - 16,         Likelihood:  0.998699

 

 

Length:

131

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.19718

Exp number, first 60 AAs:

0.19697

Total prob of N-in:

0.08686

outside

1  -  131

 

 

Pi

375.129352

Theta

243.342009

Tajima's D

1.687667

CLR

0

CSRT

0.823958802059897

Interpretation

Uncertain