SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13134
Pre Gene Modal
BGIBMGA000323
Annotation
PREDICTED:_origin_recognition_complex_subunit_3_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.612
 

Sequence

CDS
ATGGAATCCACTGTGTCAGTTTCAAAGGGAGTGTTTTTATTTCCAAATGGATTTCAAAACTCGAAAACTCTTTCAAAGAAAAAAACAAATTTATTGTTTTGTAAATTATTTCAAGAAGAGTGTTGGTATCTTACTTATAGAAAAAATTGGGAAGCTATTAAAACTAAATTAAATGAACTCAATCAAAGGTCTTACAGTGTGCTGTTGAATGATATAGTAAATTATATAAAGCAGTTTTATGGAAGTGAAGAAGCATTTATGTTGGAAGGAATAATTCCTAGCGCAACACTACTAACTGGGGTTAGTCAGCCTGATCATGTATCACAATTTGATGCACTCATAAATATAATAAAAGATGAAATAAGTCCTCATGTGGCAATAGTTAATTCACAAGATTCGTTATCATTAAAACATATAGTTGAGAACATGGTTTGGCAGTTGATTGGGAATGATTTAAAAAATGACGAAGAATGCGATGTATTATCAACAAAACATAAATTAAAAAAGAGTCAATGTACAATGAAAACCCTGAAAACGTGGTACCATTCAAAATATACAAATGAATCTACTAATAAGAAGAAAAAATCAATTTCGACAAAGACATTAGTAATAGTAATACCTGATTTTGAAAGCTTTAATTGTCACTTGTTACAAGATTTTGTAATGATAATAAGTTCGTACATATCTTCCTTGCCCATAGTGCTTGTTTTTGGGGTGGCAACATCTGTTTCGGCATTGCACAAGTCTTTCCCATATGAGGTGTCATCGAAACTTTTAATAAAAGTTTTTCATTCACATTCGTCTGCGGTTTATATGAATCAGGTGCTAGAAGATATATTTTTAACGCACACAGTTCCATTTCATTTGTCCGGGAAAGCGTTCGAATTGCTCACAGACGTTTTTCTTTTCTACGATTTTTCTGTCAAAGGATTGGTGCAAAGCATTAAGTATTGTATGATGGATCATTTTTATGGTGACAACACAAAGGTCCTCTGTTGTAAGCGTGAAGACCTTGAAGAAGCCATTCTGAATCTAAGTCCGAATGATCTTGAAAGTATCAGACAACTAAAATCGTTCCGACCTTACCTCGAGAAACAAGACTGCCGAACGAAAATAAGTCTTTTTGAAGACGATCAGTATTTCAGGGACGCTCTGTACAAGGAGCTGATGAAATTGCACGATTATTTGTATAGTTTTTATTTGTGCGTGAAATTGTTGTCGACGCTGATCAAGGACATACCGAACAATTTGCTAGGTAAAACGGTACGCGAAGTCTACACGAAATGTGCCACCGAATGCATCACAGACACGCCCTCGTTTAAGGAATGCATGCAGTTACTCAGTTTCCAGTCTCAAATTAAAATCGTCGATACCATCACTGGTGCGTTGAAGTTGCTCAATTCTCATTTACAATCAGTTTCGCCGATCAAACCCCTTCAGGCGACACCGAAGAAGAATAATAATAACACGGATAAAGTGTTTGCACACCGCGAACTGGGCGAAAGCTTCGCGAAGACAGTTCGCGTTCATTTGATGACATTCTTGAGGCAACTCGAAAATGCGAACACTGAAGCTAGTATTAGCACCGCAATGGATACCGACACGAATGACAACGTTGAAAATGTACCGGGAAGTAGATATAAACTGAAAGAGAAATTGTTAAAAGCGACTCGAGTTGAAAAAATTCAATCGGAATTCGAGATGATACGTTGCAGGTTTATAAGTTACCTCGAAGAAATGTTCGCCAAGGGACTCCAGCCTCCGCACACGCAGACGTTTCACGAAATAATGTTCTTTAGTGACATATCGAATGTTAAAAAACACATAGTAGGGGCTCCGCGGGGCGCCCTGCACACCGCGCTCAGCGACCCCGCGCACTATCTGCAGTGCTCGTGCTGTCGGCTTCCGTCGCCGGAGAGCGTGGCCGGAACGCTGCCGGACGTGTGCCTCGCTTACAAGCTGCACCGGGAGTGCGGGAAGCACATCAACCTGTACGACTGGCTGCAAGCCTTCGCAGCCGTCGTCAAGCCCGGGGAAAACGACGAACAACGACATCACGATCCGATCATACAGTCGAGGTTCACCCGCGCGGTGGCCGAATTGCAATTTCTCGGATTTATTAAATCATCAAAGCGAAAGACTGATCACGTAATGCGTTTGACTTGGTAA
Protein
MESTVSVSKGVFLFPNGFQNSKTLSKKKTNLLFCKLFQEECWYLTYRKNWEAIKTKLNELNQRSYSVLLNDIVNYIKQFYGSEEAFMLEGIIPSATLLTGVSQPDHVSQFDALINIIKDEISPHVAIVNSQDSLSLKHIVENMVWQLIGNDLKNDEECDVLSTKHKLKKSQCTMKTLKTWYHSKYTNESTNKKKKSISTKTLVIVIPDFESFNCHLLQDFVMIISSYISSLPIVLVFGVATSVSALHKSFPYEVSSKLLIKVFHSHSSAVYMNQVLEDIFLTHTVPFHLSGKAFELLTDVFLFYDFSVKGLVQSIKYCMMDHFYGDNTKVLCCKREDLEEAILNLSPNDLESIRQLKSFRPYLEKQDCRTKISLFEDDQYFRDALYKELMKLHDYLYSFYLCVKLLSTLIKDIPNNLLGKTVREVYTKCATECITDTPSFKECMQLLSFQSQIKIVDTITGALKLLNSHLQSVSPIKPLQATPKKNNNNTDKVFAHRELGESFAKTVRVHLMTFLRQLENANTEASISTAMDTDTNDNVENVPGSRYKLKEKLLKATRVEKIQSEFEMIRCRFISYLEEMFAKGLQPPHTQTFHEIMFFSDISNVKKHIVGAPRGALHTALSDPAHYLQCSCCRLPSPESVAGTLPDVCLAYKLHRECGKHINLYDWLQAFAAVVKPGENDEQRHHDPIIQSRFTRAVAELQFLGFIKSSKRKTDHVMRLTW

Summary

EMBL
GQ214392    ADD10139.1    NWSH01005810    PCG63930.1    ODYU01000983    SOQ36569.1    + More
BABH01013077    BABH01013078    NWSH01003794    PCG65808.1    GAIX01004275    JAA88285.1    KQ459586    KPI97897.1    AGBW02012251    OWR45356.1    KQ460883    KPJ11383.1    JTDY01000171    KOB78461.1    KQ971343    EFA03157.1    NEVH01011876    PNF31504.1    CH477300    EAT44270.1    CM000362    CM002911    EDX06886.1    KMY93431.1    CH480816    EDW47681.1    CM000158    EDW90658.1    AF139062    AAD39472.1    CH902619    EDV36454.2    KK853069    KDR11812.1    GFDL01015597    JAV19448.1    AF152093    AF153209    AAD32712.2    AAD47349.1    AE013599    AY060817    BT125572    BT132766    BT150363    AAF58411.1    AAL28365.1    AAM68599.1    ADM26240.1    AET07649.1    AGW52173.1    DS232572    EDS43585.1    CH954179    KQS62765.1    GBXI01009567    JAD04725.1    CP012524    ALC42132.1    JXUM01090168    KQ563822    KXJ73230.1    CH916444    EDV95488.1    CH940648    EDW60425.1    KB631120    ERL84121.1    KB631861    ERL86766.1    KB631121    ERL84124.1    ADMH02002024    ETN59932.1    CH479183    EDW36209.1    AXCM01010163    CH964154    EDW79676.1    AXCN02001759    CM000071    EAL25756.1    ATLV01016965    KE525139    KFB41660.1    CH933808    EDW10730.1    GAKP01007536    JAC51416.1    PNF31506.1    GDHF01031689    JAI20625.1    CCAG010016854    OUUW01000001    SPP72885.1    GAMC01001157    JAC05399.1    JXJN01011083    UFQT01000098    SSX19815.1    GBYB01013636    JAG83403.1    GEZM01028150    JAV86429.1    GECZ01006811    JAS62958.1    LJIG01000297    KRT86643.1    GAPW01000425    JAC13173.1    GEZM01028146    JAV86434.1    ADTU01010941    ADTU01010942    KQ434869    KZC09436.1    GEZM01028149    JAV86430.1    GL451531    EFN79094.1    KQ981953    KYN32382.1    GEZM01028147    JAV86433.1    GL888433    EGI60969.1    JT409732    AHH38795.1    CVRI01000001    CRK86551.1    AAEX03008507    GL193291    EFB18841.1    KK719548    KFO64112.1    AGTO01000666    AANG04003966    KN122596    KFO29411.1    ABLF02034108    ABLF02034109    GFFV01001424    JAV38521.1    HAAF01001642    CCP73468.1    GFXV01004071    MBW15876.1    AEYP01067414    AEYP01067415    AEYP01067416    AY391420    AAQ91232.1   
Pfam
PF07034   ORC3_N        + More
PF18137   ORC_WH_C
PF00379   Chitin_bind_4
Interpro
IPR020795   ORC3        + More
IPR040855   ORC_WH_C       
IPR000618   Insect_cuticle       
IPR031311   CHIT_BIND_RR_consensus       
PDB
4XGC     E-value=1.41748e-135,     Score=1240

Ontologies

Topology

Length:
722
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
6.94770999999999
Exp number, first 60 AAs:
0.00505
Total prob of N-in:
0.28851
outside
1  -  722
 
 

Population Genetic Test Statistics

Pi
193.545463
Theta
161.270482
Tajima's D
0.508598
CLR
0.204316
CSRT
0.512274386280686
Interpretation
Uncertain
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