Gene

KWMTBOMO13130  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000321

Annotation

PREDICTED:_coiled-coil_domain-containing_protein_6_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr22(+):8931471-8943261      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.156

CDS

ATGGATGATTCTGTAACTTCACCAGGTCATAAAATGGCAGATTCGGCGTCCGAAAGTGACTCCAGTTCACTTGACGGTGGCGCAATGCTTCCTCCGAGTACTGTTTCTCGTGATCAACTACAGAAAAGAATTGAATCTCTACAGCAACAAAATAGAGTTTTGAAAGTGGAGTTAGATACTTACAAACTTCGTGTGAAAGCTTTGCAAGAAGAAAACCGGTCTTTGAGACAAGCATCAGTTTCAATTCAAGCAAAAGCTGAACAAGAGGAAGAATATATATCTAATACATTGCTGAAAAAAATACAGGCTTTAAAGAAAGAAAAAGAGACATTAGCACATCACTATGAGCGTGAAGAGGAATGCCTTACTAATGATTTATCAAGAAAATTAAATCAGTTGAGACAAGAAAAGTGTCGTCTTGAACAAACATTGGAACAAGAGCAGGAATGTTTGGTAAATAAATTGATGAGAAAAATAGAAAAACTTGAGGCTGAGACTCTTGCAAAGCAAACGAATTTGGAAAGACTGCGTAGAGAAAAGGTTGAATTAGAGAATACATTAGAACAAGAGCAAGAAGCGCTTGTGAATAGACTTTGGAAGCGAATGGACAAGCTAGAGGCTGAAAAACGTTCGCTGCAGATAAGATTGGATCAACCAGTTTCCGATCCCGCAAGTCCTAGTAATGGTGACACAGCATCTAATCTCAGCAATCACATCCAGACCCTTCGTTCTGAGGTCGTCAAATTAAGAAATCAGTTGGCGGTGTCACAGAATGAAAATAAAGAGAAGATGCATCGGTTTGCTTTAGAAGAAAAACACATTAGGGAAGAAAATATGCGTTTGCAAAGGAAACTCCAGCAAGAGGTGGAACGCCGCGAGGCGCTATGTCGCCATCTGTCCGAGAGCGAGTCCTCACTGGAGATGGAAGAAGAAAGGCAATTTAATGAAACTTTCGGTGCGCGGTCACGCAGCGTGTCGTCGCCGGGCGGGTCGCGCCCGCTGTCGCCATACGCCTCCCCCCTGCTACCCAGCGGGGCCGGTTTGCGCCCGGGACTACACCTCAATGCACAGGGTCGTCGTCCGAGTGACAGGTTCGTGAAGCCCGCGGTGCCGGCGGGCGCGCCGCTGCCGGGGCGGGAGGCGGGGGGGCCGGCGCCGCCCTCGCTACTCCAGCCTGCCAGTCCCATGGACACTTCCTCGAAAGACTAA

Protein

MDDSVTSPGHKMADSASESDSSSLDGGAMLPPSTVSRDQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRSLRQASVSIQAKAEQEEEYISNTLLKKIQALKKEKETLAHHYEREEECLTNDLSRKLNQLRQEKCRLEQTLEQEQECLVNKLMRKIEKLEAETLAKQTNLERLRREKVELENTLEQEQEALVNRLWKRMDKLEAEKRSLQIRLDQPVSDPASPSNGDTASNLSNHIQTLRSEVVKLRNQLAVSQNENKEKMHRFALEEKHIREENMRLQRKLQQEVERREALCRHLSESESSLEMEEERQFNETFGARSRSVSSPGGSRPLSPYASPLLPSGAGLRPGLHLNAQGRRPSDRFVKPAVPAGAPLPGREAGGPAPPSLLQPASPMDTSSKD

Uniprot

H9ISU4   A0A2H1V6X2   A0A194R2A7   A0A212EV74   A0A194Q3B2   A0A0L7LC01   + More
A0A2J7Q7W2   A0A1W4WLT3   A0A224XQV1   A0A023F9J8   A0A0P4VMR4   T1IG88   A0A232F817   A0A1Y1MN52   R4G4V7   A0A1L8DB64   A0A1L8DAU0   A0A0C9PS83   D6WLJ7   A0A0L7QZJ1   N6TNG1   E2AZM2   A0A0A9VVF8   A0A1L8DAW5   A0A151IVY8   A0A0J7KWP6   A0A2A3E708   V9IMR9   A0A0M8ZRH9   A0A1B6CB26   A0A088ABI0   U5ER74   U4UFU7   A0A026WG39   A0A1S4N1R8   A0A154PCA1   A0A195CYE9   Q17LG1   F4WHT8   A0A158NM12   A0A1B6GD21   A0A0A1WW49   A0A182R6S4   A0A1Q3F1U7   W8BKP0   A0A182LT78   A0A1I8NYE1   A0A336KDP2   A0A182PPB5   A0A182KPV8   Q7PNQ2   A0A182I242   A0A182XMA8   A0A182N856   A0A182V1X4   A0A182U9K8   A0A084W2S1   A0A0L0C0Z8   A0A182WI07   A0A182Y2Y4   A0A182Q237   A0A182KFD4   B0W5B1   A0A1A9VMU8   A0A1A9Y9Z6   A0A1A9WCW2   A0A1B0G3V6   A0A1A9Z8W2   A0A0K8UR29   A0A034VB43   A0A336KB50   A0A182SLM9   A0A182JE69   A0A1W7R4M2   B4N4W3   A0A2M3ZI69   T1PBD1   A0A2M4ALI4   A0A182FCM6   W5J9J9   A0A3B0KAQ3   T1E8P3   B4H5N3   Q29EX4   A0A1S3D767   B3M440   A0A1W4VVI6   E0W3M3   B4QND7  

Pubmed

19121390    26354079    22118469    26227816    25474469    27129103    + More
28648823    28004739    18362917    19820115    23537049    20798317    25401762    26823975    24508170    20566863    17510324    21719571    21347285    25830018    24495485    20966253    12364791    14747013    17210077    24438588    26108605    25244985    25348373    17994087    25315136    20920257    23761445    15632085    23185243    18057021    22936249   

EMBL

BABH01013084    BABH01013085    BABH01013086    ODYU01000983    SOQ36571.1    KQ460883    + More
KPJ11385.1    AGBW02012251    OWR45354.1    KQ459586    KPI97895.1    JTDY01001745    KOB73013.1    NEVH01017000    PNF24672.1    GFTR01006045    JAW10381.1    GBBI01000536    JAC18176.1    GDKW01000743    JAI55852.1    ACPB03006816    NNAY01000769    OXU26608.1    GEZM01026253    JAV87091.1    GAHY01001040    JAA76470.1    GFDF01010494    JAV03590.1    GFDF01010493    JAV03591.1    GBYB01004218    JAG73985.1    KQ971343    EFA03440.1    KQ414681    KOC63957.1    APGK01028166    APGK01028167    KB740686    ENN79528.1    GL444254    EFN61121.1    GBHO01045409    GBHO01045408    GBHO01045406    GDHC01008851    GDHC01001573    JAF98194.1    JAF98195.1    JAF98197.1    JAQ09778.1    JAQ17056.1    GFDF01010478    JAV03606.1    KQ980878    KYN12021.1    LBMM01002342    KMQ94952.1    KZ288347    PBC27553.1    JR053092    AEY61854.1    KQ435955    KOX68059.1    GEDC01026803    JAS10495.1    GANO01003867    JAB56004.1    KB632335    ERL92834.1    KK107238    EZA54606.1    AAZO01007422    KQ434870    KZC09472.1    KQ977171    KYN05169.1    CH477216    EAT47500.1    EAT47501.1    GL888167    EGI66295.1    ADTU01020137    GECZ01009427    JAS60342.1    GBXI01011195    JAD03097.1    GFDL01013538    JAV21507.1    GAMC01016436    JAB90119.1    AXCM01006504    UFQS01000238    UFQT01000238    SSX01838.1    SSX22215.1    AAAB01008960    EAA11792.4    APCN01000111    ATLV01019689    KE525277    KFB44515.1    JRES01001151    KNC25139.1    AXCN02000922    DS231842    EDS35231.1    CCAG010020666    GDHF01031335    GDHF01023273    GDHF01006270    JAI20979.1    JAI29041.1    JAI46044.1    GAKP01020195    GAKP01020194    JAC38758.1    SSX01839.1    SSX22216.1    GEHC01001546    JAV46099.1    CH964101    EDW79402.1    GGFM01007493    MBW28244.1    KA646047    AFP60676.1    GGFK01008319    MBW41640.1    ADMH02002086    ETN59419.1    OUUW01000009    SPP85210.1    GAMD01002588    JAA99002.1    CH479211    EDW33085.1    CH379070    EAL29935.2    KRT08501.1    CH902618    EDV40402.1    KPU78546.1    DS235882    EEB20229.1    CM000363    CM002912    EDX10807.1    KMZ00176.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000053268    UP000037510    UP000235965    + More
UP000192223    UP000015103    UP000215335    UP000007266    UP000053825    UP000019118    UP000000311    UP000078492    UP000036403    UP000242457    UP000053105    UP000005203    UP000030742    UP000053097    UP000076502    UP000078542    UP000008820    UP000007755    UP000005205    UP000075900    UP000075883    UP000095300    UP000075885    UP000075882    UP000007062    UP000075840    UP000076407    UP000075884    UP000075903    UP000075902    UP000030765    UP000037069    UP000075920    UP000076408    UP000075886    UP000075881    UP000002320    UP000078200    UP000092443    UP000091820    UP000092444    UP000092445    UP000075901    UP000075880    UP000007798    UP000095301    UP000069272    UP000000673    UP000268350    UP000008744    UP000001819    UP000079169    UP000007801    UP000192221    UP000009046    UP000000304   

PRIDE

H9ISU4   

Pfam

PF09755   DUF2046

Interpro

IPR019152   DUF2046       

ProteinModelPortal

H9ISU4   A0A2H1V6X2   A0A194R2A7   A0A212EV74   A0A194Q3B2   A0A0L7LC01   + More
A0A2J7Q7W2   A0A1W4WLT3   A0A224XQV1   A0A023F9J8   A0A0P4VMR4   T1IG88   A0A232F817   A0A1Y1MN52   R4G4V7   A0A1L8DB64   A0A1L8DAU0   A0A0C9PS83   D6WLJ7   A0A0L7QZJ1   N6TNG1   E2AZM2   A0A0A9VVF8   A0A1L8DAW5   A0A151IVY8   A0A0J7KWP6   A0A2A3E708   V9IMR9   A0A0M8ZRH9   A0A1B6CB26   A0A088ABI0   U5ER74   U4UFU7   A0A026WG39   A0A1S4N1R8   A0A154PCA1   A0A195CYE9   Q17LG1   F4WHT8   A0A158NM12   A0A1B6GD21   A0A0A1WW49   A0A182R6S4   A0A1Q3F1U7   W8BKP0   A0A182LT78   A0A1I8NYE1   A0A336KDP2   A0A182PPB5   A0A182KPV8   Q7PNQ2   A0A182I242   A0A182XMA8   A0A182N856   A0A182V1X4   A0A182U9K8   A0A084W2S1   A0A0L0C0Z8   A0A182WI07   A0A182Y2Y4   A0A182Q237   A0A182KFD4   B0W5B1   A0A1A9VMU8   A0A1A9Y9Z6   A0A1A9WCW2   A0A1B0G3V6   A0A1A9Z8W2   A0A0K8UR29   A0A034VB43   A0A336KB50   A0A182SLM9   A0A182JE69   A0A1W7R4M2   B4N4W3   A0A2M3ZI69   T1PBD1   A0A2M4ALI4   A0A182FCM6   W5J9J9   A0A3B0KAQ3   T1E8P3   B4H5N3   Q29EX4   A0A1S3D767   B3M440   A0A1W4VVI6   E0W3M3   B4QND7  

KEGG

101745109    K09288 coiled-coil domain-containing protein 6 | (RefSeq) coiled-coil domain-containing protein 6

GO

PANTHER

PTHR15276  

Length:

402

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00028

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00502

outside

1  -  402

 

 

Pi

198.305008

Theta

150.77189

Tajima's D

0.611063

CLR

187.686291

CSRT

0.544722763861807

Interpretation

Uncertain